RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 FAM27BQ5VT28 67 aa10.71□□□□□ -0.7
TCF4-248ENST00000616053 LINC01356Q8N9X3 169 aa10.7□□□□□ -0.7
TCF4-248ENST00000616053 PDFQ9HBH1 243 aa10.7□□□□□ -0.7
TCF4-248ENST00000616053 SEC61GP60059 68 aa10.7□□□□□ -0.7
TCF4-248ENST00000616053 TMEM219Q86XT9 240 aa10.7□□□□□ -0.7
TCF4-248ENST00000616053 TIMM17AQ99595 171 aa10.7□□□□□ -0.7
TCF4-248ENST00000616053 NABP2Q9BQ15 211 aa10.7□□□□□ -0.7
TCF4-248ENST00000616053 ZNF257Q9Y2Q1 563 aa10.7□□□□□ -0.7
TCF4-248ENST00000616053 PGPEP1LA6NFU8 196 aa10.7□□□□□ -0.7
TCF4-248ENST00000616053 SCTP09683 121 aa10.7□□□□□ -0.7
TCF4-248ENST00000616053 NBEAP1P0C6P0 100 aa10.7□□□□□ -0.7
TCF4-248ENST00000616053 MRPL14Q6P1L8 145 aaKnown RBP10.7□□□□□ -0.7
TCF4-248ENST00000616053 RIMKLAQ8IXN7 391 aa10.7□□□□□ -0.7
TCF4-248ENST00000616053 LINC01555Q8NAE3 123 aa10.7□□□□□ -0.7
TCF4-248ENST00000616053 RASL10AQ92737 203 aa10.7□□□□□ -0.7
TCF4-248ENST00000616053 ASCL2Q99929 193 aa10.7□□□□□ -0.7
TCF4-248ENST00000616053 H1FOOQ8IZA3 346 aaPredicted RBP10.7□□□□□ -0.7
TCF4-248ENST00000616053 C7orf77A4D0Y5 90 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 SIGLEC15Q6ZMC9 328 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 C15orf53Q8NAA6 179 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 TCF19Q9Y242 345 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 TCRBV16S1A1N1A0A5B0 115 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 LEPROTO15243 131 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 CRLF1O75462 422 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 PRCDQ00LT1 54 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 BAALCQ8WXS3 180 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 MESP2Q0VG99 397 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 WNK2Q9Y3S1 2297 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 A0A0U1RQV5 110 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 PLPP2O43688 288 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 Q6ZT83 130 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 FGFRL1Q8N441 504 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 LMO1P25800 156 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 C9orf40Q8IXQ3 194 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 ATOH7Q8N100 152 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 FIZ1Q96SL8 496 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 CXorf51AA0A1B0GTR3 108 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 TM4SF5O14894 197 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 WDFY2Q96P53 400 aa10.69□□□□□ -0.7
TCF4-248ENST00000616053 TRAV41A0A0B4J266 112 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 CA1P00915 261 aaPredicted RBP10.68□□□□□ -0.7
TCF4-248ENST00000616053 ATP6V0CP27449 155 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 SRSF1Q07955 248 aaKnown RBP eCLIP10.68□□□□□ -0.7
TCF4-248ENST00000616053 ORMDL2Q53FV1 153 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 RNF223E7ERA6 249 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 EVI2AP22794 236 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 LHX2P50458 406 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 NOVP48745 357 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 Q96MF0 132 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 COL6A6A6NMZ7 2263 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 N4BP2Q86UW6 1770 aaPredicted RBP10.68□□□□□ -0.7
TCF4-248ENST00000616053 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.68□□□□□ -0.7
TCF4-248ENST00000616053 MBD3L4A6NDZ8 208 aaPredicted RBP10.68□□□□□ -0.7
TCF4-248ENST00000616053 MBD3L3A6NE82 208 aaPredicted RBP10.68□□□□□ -0.7
TCF4-248ENST00000616053 MBD3L5A6NJ08 208 aaPredicted RBP10.68□□□□□ -0.7
TCF4-248ENST00000616053 BCL2P10415 239 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 SPSB3Q6PJ21 355 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 MBD3L2Q8NHZ7 208 aaPredicted RBP10.68□□□□□ -0.7
TCF4-248ENST00000616053 TMEM174Q8WUU8 243 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 ATG4DQ86TL0 474 aaPredicted RBP10.68□□□□□ -0.7
TCF4-248ENST00000616053 FABP5P3A8MUU1 101 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 CISD3P0C7P0 127 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 FOXL2P58012 376 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 CFHR3Q02985 330 aa10.68□□□□□ -0.7
TCF4-248ENST00000616053 MRM2Q9UI43 246 aaKnown RBP10.68□□□□□ -0.7
TCF4-248ENST00000616053 TRAV13-1A0A0B4J241 112 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 TBR1Q16650 682 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 HIST1H2BAQ96A08 127 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 UQCR10Q9UDW1 63 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 VWC2Q2TAL6 325 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 ALPK2Q86TB3 2170 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 CYB561D1Q8N8Q1 229 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 TMEM158Q8WZ71 300 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 PRDM13Q9H4Q3 707 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 IGKV2D-24A0A075B6R9 120 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 NDUFAF3Q9BU61 184 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 PKIBQ9C010 78 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 ZNFX1Q9P2E3 1918 aaKnown RBP10.67□□□□□ -0.7
TCF4-248ENST00000616053 FREM1Q5H8C1 2179 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 A0A1B0GUT8 65 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 CA7P43166 264 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 EGR4Q05215 589 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 OR10W1Q8NGF6 305 aa10.67□□□□□ -0.7
TCF4-248ENST00000616053 ZNF876PQ49A33 203 aa10.66□□□□□ -0.7
TCF4-248ENST00000616053 ZNF501Q96CX3 271 aaPredicted RBP10.66□□□□□ -0.7
TCF4-248ENST00000616053 NEU3Q9UQ49 428 aa10.66□□□□□ -0.7
TCF4-248ENST00000616053 C15orf61A6NNL5 157 aa10.66□□□□□ -0.7
TCF4-248ENST00000616053 RPL39P5Q59GN2 51 aa10.66□□□□□ -0.7
TCF4-248ENST00000616053 FBLIM1Q8WUP2 373 aa10.66□□□□□ -0.7
TCF4-248ENST00000616053 RPP21Q9H633 154 aaKnown RBP10.66□□□□□ -0.7
TCF4-248ENST00000616053 OVOL1O14753 267 aa10.66□□□□□ -0.7
TCF4-248ENST00000616053 OVOL2Q9BRP0 275 aa10.66□□□□□ -0.7
TCF4-248ENST00000616053 MDKP21741 143 aaPredicted RBP10.66□□□□□ -0.7
TCF4-248ENST00000616053 FOXA3P55318 350 aaPredicted RBP10.66□□□□□ -0.7
TCF4-248ENST00000616053 SEC11AP67812 179 aa10.66□□□□□ -0.7
TCF4-248ENST00000616053 Q9HAA7 133 aa10.66□□□□□ -0.7
TCF4-248ENST00000616053 H3BUX3 64 aa10.66□□□□□ -0.7
TCF4-248ENST00000616053 ORMDL3Q8N138 153 aa10.66□□□□□ -0.7
TCF4-248ENST00000616053 C3P01024 1663 aa10.66□□□□□ -0.7
TCF4-248ENST00000616053 SNAI2O43623 268 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms