RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 RNF114Q9Y508 228 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 OR51B2Q9Y5P1 312 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 RYR3Q15413 4870 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 TRAV3A0A0B4J244 114 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 UBE2L5PA0A1B0GUS4 154 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 MFSD2BA6NFX1 497 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 NUDT19A8MXV4 375 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 TEX46H3BTG2 121 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 M0QZ24 198 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 IFNA10P01566 189 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 IGKV1-16P04430 117 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 SAA1P0DJI8 122 aaPredicted RBP8.6□□□□□ -1.03
COL4A1-205ENST00000615732 ATP6V0CP27449 155 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 BPIFB3P59826 476 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 HSPE1P61604 102 aaKnown RBP8.6□□□□□ -1.03
COL4A1-205ENST00000615732 KLRD1Q13241 179 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 AKR1C8PQ5T2L2 129 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 Q6ZRG5 221 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 VMO1Q7Z5L0 202 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 HSD17B13Q7Z5P4 300 aaPredicted RBP8.6□□□□□ -1.03
COL4A1-205ENST00000615732 MOB3BQ86TA1 216 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 PIP4P2Q8N4L2 257 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 TMEM86BQ8N661 226 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 ST6GALNAC6Q969X2 333 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 TMEM147Q9BVK8 224 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 HINT2Q9BX68 163 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 SH3BGRL3Q9H299 93 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 PLEKHA3Q9HB20 300 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 SIRT7Q9NRC8 400 aa8.6□□□□□ -1.03
COL4A1-205ENST00000615732 BUB1B-PAK6H3BSN5 160 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 KBTBD11O94819 623 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 IGLV1-47P01700 117 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 RAB11AP62491 216 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 ZNF616Q08AN1 781 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 ARL16Q0P5N6 197 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 DIAPH2-AS1Q14236 149 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 TOR2AQ5JU69 321 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 PXDC1Q5TGL8 231 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 HIST2H2BDQ6DRA6 164 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 IL34Q6ZMJ4 242 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 HAPLN4Q86UW8 402 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 PUSL1Q8N0Z8 303 aaKnown RBP8.59□□□□□ -1.03
COL4A1-205ENST00000615732 LINC01006Q8NI28 216 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 MARC2Q969Z3 335 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 PARP11Q9NR21 331 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 TMEM14BQ9NUH8 114 aa8.59□□□□□ -1.03
COL4A1-205ENST00000615732 IGHV3-72A0A0B4J1Y9 119 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 IGHV1-3A0A0C4DH29 117 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 UMAD1C9J7I0 102 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 TIMM23O14925 209 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 HTR1DP28221 377 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 CEACAM3P40198 252 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 VDAC2P45880 294 aaPredicted RBP8.58□□□□□ -1.04
COL4A1-205ENST00000615732 IER3P46695 156 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 LGALS7P47929 136 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 F2RL1P55085 397 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 PROK1P58294 105 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 TPTE2P1Q5T6R2 138 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 Q6ZSV7 163 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 THNSL2Q86YJ6 484 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 Q8N7P7 452 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 OR4P4Q8NGL7 312 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 OR5B3Q8NH48 314 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 FAM213BQ8TBF2 198 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 PARD6GQ9BYG4 376 aaPredicted RBP8.58□□□□□ -1.04
COL4A1-205ENST00000615732 COMMD5Q9GZQ3 224 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 HRH4Q9H3N8 390 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 UQCC1Q9NVA1 299 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 ZNF257Q9Y2Q1 563 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 KPTNQ9Y664 436 aa8.58□□□□□ -1.04
COL4A1-205ENST00000615732 A0A1W2PN81 502 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 RAB19A4D1S5 217 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 SRRM4A7MD48 611 aaKnown RBP8.57□□□□□ -1.04
COL4A1-205ENST00000615732 C15orf62A8K5M9 175 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 IFNA4P05014 189 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 FGF7P21781 194 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 NPY1RP25929 384 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 CHRNA7P36544 502 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 RPL8P62917 257 aaKnown RBP8.57□□□□□ -1.04
COL4A1-205ENST00000615732 PRCDQ00LT1 54 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 RUNX1Q01196 453 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 LRRC75BQ2VPJ9 315 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 UQCC3Q6UW78 93 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 ETV3LQ6ZN32 361 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 C1orf122Q6ZSJ8 110 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 MRPL41Q8IXM3 137 aaKnown RBP8.57□□□□□ -1.04
COL4A1-205ENST00000615732 SLC24A4Q8NFF2 622 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 OR11H6Q8NGC7 330 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 OR1L8Q8NGR8 309 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 FAM110DQ8TAY7 271 aaPredicted RBP8.57□□□□□ -1.04
COL4A1-205ENST00000615732 TMEM167AQ8TBQ9 72 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 WDR61Q9GZS3 305 aaKnown RBP8.57□□□□□ -1.04
COL4A1-205ENST00000615732 DPM3Q9P2X0 92 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 FAM96BQ9Y3D0 163 aa8.57□□□□□ -1.04
COL4A1-205ENST00000615732 SMCO3A2RU48 225 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 RNASEK-C17orf49H0YIS7 233 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 SLC25A17O43808 307 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 OPN1MWP04001 364 aa8.56□□□□□ -1.04
COL4A1-205ENST00000615732 IL6RP08887 468 aaPredicted RBP8.56□□□□□ -1.04
COL4A1-205ENST00000615732 OPN1MW2P0DN77 364 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms