RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 C15orf40Q8WUR7 153 aa17.07■□□□□ 0.32
FAM228B-208ENST00000613899 ZNF486Q96H40 463 aaPredicted RBP17.07■□□□□ 0.32
FAM228B-208ENST00000613899 HIPK2Q9H2X6 1198 aa17.07■□□□□ 0.32
FAM228B-208ENST00000613899 EXTL2Q9UBQ6 330 aa17.07■□□□□ 0.32
FAM228B-208ENST00000613899 SELENOKQ9Y6D0 94 aa17.07■□□□□ 0.32
FAM228B-208ENST00000613899 SCAF4O95104 1147 aaKnown RBP17.06■□□□□ 0.32
FAM228B-208ENST00000613899 GPR107Q5VW38 600 aa17.06■□□□□ 0.32
FAM228B-208ENST00000613899 RBPMS2Q6ZRY4 209 aaKnown RBP17.06■□□□□ 0.32
FAM228B-208ENST00000613899 ARRDC1Q8N5I2 433 aa17.06■□□□□ 0.32
FAM228B-208ENST00000613899 OR1P1Q8NH06 330 aa17.06■□□□□ 0.32
FAM228B-208ENST00000613899 SCARB1Q8WTV0 552 aa17.06■□□□□ 0.32
FAM228B-208ENST00000613899 MRGPRFQ96AM1 343 aa17.06■□□□□ 0.32
FAM228B-208ENST00000613899 DAZ1Q9NQZ3 744 aaKnown RBP17.06■□□□□ 0.32
FAM228B-208ENST00000613899 KLK11Q9UBX7 282 aa17.06■□□□□ 0.32
FAM228B-208ENST00000613899 RBMY1BA6NDE4 496 aaKnown RBP17.05■□□□□ 0.32
FAM228B-208ENST00000613899 RBMY1EA6NEQ0 496 aaKnown RBP17.05■□□□□ 0.32
FAM228B-208ENST00000613899 DBX1A6NMT0 343 aa17.05■□□□□ 0.32
FAM228B-208ENST00000613899 K7EIM0 57 aa17.05■□□□□ 0.32
FAM228B-208ENST00000613899 IGKV1-39P01597 117 aa17.05■□□□□ 0.32
FAM228B-208ENST00000613899 IGKV1D-39P04432 117 aa17.05■□□□□ 0.32
FAM228B-208ENST00000613899 RBMY1DP0C7P1 496 aaKnown RBP17.05■□□□□ 0.32
FAM228B-208ENST00000613899 PGAM2P15259 253 aa17.05■□□□□ 0.32
FAM228B-208ENST00000613899 RND3P61587 244 aa17.05■□□□□ 0.32
FAM228B-208ENST00000613899 OR52I2Q8NH67 350 aa17.05■□□□□ 0.32
FAM228B-208ENST00000613899 MRPS26Q9BYN8 205 aaKnown RBP17.05■□□□□ 0.32
FAM228B-208ENST00000613899 GAR1Q9NY12 217 aaKnown RBP17.05■□□□□ 0.32
FAM228B-208ENST00000613899 IGHV3-21A0A0B4J1V1 117 aa17.04■□□□□ 0.32
FAM228B-208ENST00000613899 NDUFA4O00483 81 aa17.04■□□□□ 0.32
FAM228B-208ENST00000613899 Q56UQ5 140 aa17.04■□□□□ 0.32
FAM228B-208ENST00000613899 LHFPL1Q86WI0 220 aa17.04■□□□□ 0.32
FAM228B-208ENST00000613899 UBAC2Q8NBM4 344 aa17.04■□□□□ 0.32
FAM228B-208ENST00000613899 RETNQ9HD89 108 aa17.04■□□□□ 0.32
FAM228B-208ENST00000613899 MTFP1Q9UDX5 166 aa17.04■□□□□ 0.32
FAM228B-208ENST00000613899 CD3DP04234 171 aa17.03■□□□□ 0.32
FAM228B-208ENST00000613899 PRCDQ00LT1 54 aa17.03■□□□□ 0.32
FAM228B-208ENST00000613899 ZFAND6Q6FIF0 208 aa17.03■□□□□ 0.32
FAM228B-208ENST00000613899 GPR141Q7Z602 305 aa17.03■□□□□ 0.32
FAM228B-208ENST00000613899 OR2C3Q8N628 320 aa17.03■□□□□ 0.32
FAM228B-208ENST00000613899 ZNF114Q8NC26 417 aa17.03■□□□□ 0.32
FAM228B-208ENST00000613899 C5orf66Q9H5L9 145 aa17.03■□□□□ 0.32
FAM228B-208ENST00000613899 F8W735 103 aaPredicted RBP17.02■□□□□ 0.32
FAM228B-208ENST00000613899 PIGPP57054 158 aa17.02■□□□□ 0.32
FAM228B-208ENST00000613899 SPAG8Q99932 426 aaPredicted RBP17.02■□□□□ 0.32
FAM228B-208ENST00000613899 CHRDL1Q9BU40 450 aa17.02■□□□□ 0.32
FAM228B-208ENST00000613899 ATG12O94817 140 aa17.01■□□□□ 0.31
FAM228B-208ENST00000613899 TAS2R19P59542 299 aa17.01■□□□□ 0.31
FAM228B-208ENST00000613899 HSPE1P61604 102 aaKnown RBP17.01■□□□□ 0.31
FAM228B-208ENST00000613899 RELQ04864 619 aaPredicted RBP17.01■□□□□ 0.31
FAM228B-208ENST00000613899 MISP3Q96FF7 219 aa17.01■□□□□ 0.31
FAM228B-208ENST00000613899 ABHD1Q96SE0 405 aa17.01■□□□□ 0.31
FAM228B-208ENST00000613899 FAM110AQ9BQ89 295 aa17.01■□□□□ 0.31
FAM228B-208ENST00000613899 C20orf24Q9BUV8 137 aa17.01■□□□□ 0.31
FAM228B-208ENST00000613899 NUPL2O15504 423 aaKnown RBP17■□□□□ 0.31
FAM228B-208ENST00000613899 RGS5O15539 181 aa17■□□□□ 0.31
FAM228B-208ENST00000613899 PI3P19957 117 aa17■□□□□ 0.31
FAM228B-208ENST00000613899 ADMP35318 185 aa17■□□□□ 0.31
FAM228B-208ENST00000613899 AKR1C2P52895 323 aa17■□□□□ 0.31
FAM228B-208ENST00000613899 PPP5CP53041 499 aa17■□□□□ 0.31
FAM228B-208ENST00000613899 ERHP84090 104 aaKnown RBP17■□□□□ 0.31
FAM228B-208ENST00000613899 LAMTOR1Q6IAA8 161 aa17■□□□□ 0.31
FAM228B-208ENST00000613899 CCDC71LQ8N9Z2 235 aa17■□□□□ 0.31
FAM228B-208ENST00000613899 TMEM229BQ8NBD8 167 aa17■□□□□ 0.31
FAM228B-208ENST00000613899 ZFAND1Q8TCF1 268 aa17■□□□□ 0.31
FAM228B-208ENST00000613899 GGTLC1Q9BX51 225 aa17■□□□□ 0.31
FAM228B-208ENST00000613899 GABARAPH6UMI1 98 aa16.99■□□□□ 0.31
FAM228B-208ENST00000613899 K7EMT4 169 aa16.99■□□□□ 0.31
FAM228B-208ENST00000613899 TSPAN4O14817 238 aa16.99■□□□□ 0.31
FAM228B-208ENST00000613899 CD74P04233 296 aa16.99■□□□□ 0.31
FAM228B-208ENST00000613899 FCGR2BP31994 310 aaPredicted RBP16.99■□□□□ 0.31
FAM228B-208ENST00000613899 ALDH3B2P48448 385 aa16.99■□□□□ 0.31
FAM228B-208ENST00000613899 MFAP4P55083 255 aa16.99■□□□□ 0.31
FAM228B-208ENST00000613899 MRPS10P82664 201 aaKnown RBP16.99■□□□□ 0.31
FAM228B-208ENST00000613899 SSBP1Q04837 148 aaKnown RBP16.99■□□□□ 0.31
FAM228B-208ENST00000613899 TP53RKQ96S44 253 aa16.99■□□□□ 0.31
FAM228B-208ENST00000613899 TXN2Q99757 166 aa16.99■□□□□ 0.31
FAM228B-208ENST00000613899 COPZ2Q9P299 210 aa16.99■□□□□ 0.31
FAM228B-208ENST00000613899 CSMD3Q7Z407 3707 aa16.98■□□□□ 0.31
FAM228B-208ENST00000613899 LOC102724200A0A096LPH7 203 aaPredicted RBP16.98■□□□□ 0.31
FAM228B-208ENST00000613899 C3orf85A0A1B0GTC6 90 aa16.98■□□□□ 0.31
FAM228B-208ENST00000613899 C15orf62A8K5M9 175 aa16.98■□□□□ 0.31
FAM228B-208ENST00000613899 I3L2K1 104 aa16.98■□□□□ 0.31
FAM228B-208ENST00000613899 RAB3DO95716 219 aa16.98■□□□□ 0.31
FAM228B-208ENST00000613899 CTSGP08311 255 aa16.98■□□□□ 0.31
FAM228B-208ENST00000613899 SCGB2B2Q4G0G5 96 aa16.98■□□□□ 0.31
FAM228B-208ENST00000613899 OR4D10Q8NGI6 311 aa16.98■□□□□ 0.31
FAM228B-208ENST00000613899 TERB2Q8NHR7 220 aa16.98■□□□□ 0.31
FAM228B-208ENST00000613899 IL17DQ8TAD2 202 aa16.98■□□□□ 0.31
FAM228B-208ENST00000613899 MIXL1Q9H2W2 232 aa16.98■□□□□ 0.31
FAM228B-208ENST00000613899 DYNC2H1Q8NCM8 4307 aaKnown RBP16.98■□□□□ 0.31
FAM228B-208ENST00000613899 B3GALNT1O75752 331 aa16.97■□□□□ 0.31
FAM228B-208ENST00000613899 MT-CO2P00403 227 aa16.97■□□□□ 0.31
FAM228B-208ENST00000613899 IGKV1-5P01602 117 aa16.97■□□□□ 0.31
FAM228B-208ENST00000613899 STEAP1BQ6NZ63 245 aa16.97■□□□□ 0.31
FAM228B-208ENST00000613899 SLC35G3Q8N808 338 aa16.97■□□□□ 0.31
FAM228B-208ENST00000613899 PDCD10Q9BUL8 212 aa16.97■□□□□ 0.31
FAM228B-208ENST00000613899 P0C879 139 aa16.96■□□□□ 0.31
FAM228B-208ENST00000613899 TRIM16LQ309B1 348 aa16.96■□□□□ 0.31
FAM228B-208ENST00000613899 OR13C8Q8NGS7 320 aa16.96■□□□□ 0.31
FAM228B-208ENST00000613899 IGHV3OR16-8A0A075B7F1 116 aa16.95■□□□□ 0.3
FAM228B-208ENST00000613899 INS-IGF2F8WCM5 200 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms