RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 ZNF343Q6P1L6 599 aa12.83□□□□□ -0.36
IRF1-211ENST00000613424 LRTM2Q8N967 370 aa12.83□□□□□ -0.36
IRF1-211ENST00000613424 DPF1Q92782 380 aa12.83□□□□□ -0.36
IRF1-211ENST00000613424 C20orf85Q9H1P6 137 aa12.83□□□□□ -0.36
IRF1-211ENST00000613424 CACNG5Q9UF02 275 aa12.83□□□□□ -0.36
IRF1-211ENST00000613424 DMRT1Q9Y5R6 373 aa12.83□□□□□ -0.36
IRF1-211ENST00000613424 IGHV4OR15-8A0A075B7B6 117 aa12.82□□□□□ -0.36
IRF1-211ENST00000613424 A0A087WW49 117 aa12.82□□□□□ -0.36
IRF1-211ENST00000613424 PIGBOS1A0A0B4J2F0 54 aa12.82□□□□□ -0.36
IRF1-211ENST00000613424 FAM240BA0A1B0GVZ2 78 aa12.82□□□□□ -0.36
IRF1-211ENST00000613424 ANKRD34BA5PLL1 514 aa12.82□□□□□ -0.36
IRF1-211ENST00000613424 LINC01619G3V211 115 aa12.82□□□□□ -0.36
IRF1-211ENST00000613424 C15orf32Q32M92 178 aa12.82□□□□□ -0.36
IRF1-211ENST00000613424 AARDQ4LEZ3 155 aa12.82□□□□□ -0.36
IRF1-211ENST00000613424 NMSQ5H8A3 153 aa12.82□□□□□ -0.36
IRF1-211ENST00000613424 OR2C3Q8N628 320 aa12.82□□□□□ -0.36
IRF1-211ENST00000613424 PDCD10Q9BUL8 212 aa12.82□□□□□ -0.36
IRF1-211ENST00000613424 PLEKHA3Q9HB20 300 aa12.82□□□□□ -0.36
IRF1-211ENST00000613424 F11RQ9Y624 299 aaKnown RBP12.82□□□□□ -0.36
IRF1-211ENST00000613424 TRAV6A0A075B6T7 132 aa12.81□□□□□ -0.36
IRF1-211ENST00000613424 DUXBA0A1W2PPF3 345 aa12.81□□□□□ -0.36
IRF1-211ENST00000613424 HLA-AP01891 365 aaKnown RBP12.81□□□□□ -0.36
IRF1-211ENST00000613424 OR8U8P0C7N1 319 aa12.81□□□□□ -0.36
IRF1-211ENST00000613424 SULT1A3P0DMM9 295 aa12.81□□□□□ -0.36
IRF1-211ENST00000613424 SULT1A4P0DMN0 295 aa12.81□□□□□ -0.36
IRF1-211ENST00000613424 MFAP2P55001 183 aa12.81□□□□□ -0.36
IRF1-211ENST00000613424 SPCS3P61009 180 aa12.81□□□□□ -0.36
IRF1-211ENST00000613424 ERHP84090 104 aaKnown RBP12.81□□□□□ -0.36
IRF1-211ENST00000613424 DHRS2Q13268 280 aa12.81□□□□□ -0.36
IRF1-211ENST00000613424 C4orf46Q504U0 113 aa12.81□□□□□ -0.36
IRF1-211ENST00000613424 SLC25A24Q6NUK1 477 aa12.81□□□□□ -0.36
IRF1-211ENST00000613424 LYG2Q86SG7 212 aa12.81□□□□□ -0.36
IRF1-211ENST00000613424 OR52E5Q8NH55 327 aa12.81□□□□□ -0.36
IRF1-211ENST00000613424 RANGRFQ9HD47 186 aaPredicted RBP12.81□□□□□ -0.36
IRF1-211ENST00000613424 PEF1Q9UBV8 284 aaKnown RBP12.81□□□□□ -0.36
IRF1-211ENST00000613424 NBEAL1Q6ZS30 2694 aa12.8□□□□□ -0.36
IRF1-211ENST00000613424 INS-IGF2F8WCM5 200 aa12.8□□□□□ -0.36
IRF1-211ENST00000613424 CYB5BO43169 146 aa12.8□□□□□ -0.36
IRF1-211ENST00000613424 TRBV12-3P01733 135 aa12.8□□□□□ -0.36
IRF1-211ENST00000613424 H2AFB2P0C5Z0 115 aa12.8□□□□□ -0.36
IRF1-211ENST00000613424 EXOSC2Q13868 293 aaKnown RBP12.8□□□□□ -0.36
IRF1-211ENST00000613424 SMCO1Q147U7 214 aa12.8□□□□□ -0.36
IRF1-211ENST00000613424 NUDT15Q9NV35 164 aa12.8□□□□□ -0.36
IRF1-211ENST00000613424 THYN1Q9P016 225 aa12.8□□□□□ -0.36
IRF1-211ENST00000613424 A0A1B0GU03 582 aa12.79□□□□□ -0.36
IRF1-211ENST00000613424 DUS4LO95620 317 aaKnown RBP12.79□□□□□ -0.36
IRF1-211ENST00000613424 HOXB5P09067 269 aa12.79□□□□□ -0.36
IRF1-211ENST00000613424 IGLL1P15814 213 aa12.79□□□□□ -0.36
IRF1-211ENST00000613424 SLURP1P55000 103 aa12.79□□□□□ -0.36
IRF1-211ENST00000613424 PDLIM3Q53GG5 364 aaPredicted RBP12.79□□□□□ -0.36
IRF1-211ENST00000613424 OXLD1Q5BKU9 147 aa12.79□□□□□ -0.36
IRF1-211ENST00000613424 OR1L6Q8NGR2 347 aa12.79□□□□□ -0.36
IRF1-211ENST00000613424 OR1P1Q8NH06 330 aa12.79□□□□□ -0.36
IRF1-211ENST00000613424 DCUN1D4Q92564 292 aa12.79□□□□□ -0.36
IRF1-211ENST00000613424 RCC1LQ96I51 464 aaKnown RBP12.79□□□□□ -0.36
IRF1-211ENST00000613424 TMED3Q9Y3Q3 217 aa12.79□□□□□ -0.36
IRF1-211ENST00000613424 S4R3C0 116 aa12.79□□□□□ -0.36
IRF1-211ENST00000613424 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.78□□□□□ -0.36
IRF1-211ENST00000613424 G3V4G9 280 aa12.78□□□□□ -0.36
IRF1-211ENST00000613424 NXPH3O95157 252 aa12.78□□□□□ -0.36
IRF1-211ENST00000613424 IGHV3-23P01764 117 aa12.78□□□□□ -0.36
IRF1-211ENST00000613424 HOXA1P49639 335 aaPredicted RBP12.78□□□□□ -0.36
IRF1-211ENST00000613424 ZNF114Q8NC26 417 aa12.78□□□□□ -0.36
IRF1-211ENST00000613424 OR52B4Q8NGK2 314 aa12.78□□□□□ -0.36
IRF1-211ENST00000613424 COQ8AQ8NI60 647 aa12.78□□□□□ -0.36
IRF1-211ENST00000613424 ENKURQ8TC29 256 aa12.78□□□□□ -0.36
IRF1-211ENST00000613424 DLX4Q92988 240 aaPredicted RBP12.78□□□□□ -0.36
IRF1-211ENST00000613424 EEF1AKMT3Q96AZ1 226 aa12.78□□□□□ -0.36
IRF1-211ENST00000613424 ENY2Q9NPA8 101 aa12.78□□□□□ -0.36
IRF1-211ENST00000613424 CACFD1Q9UGQ2 172 aa12.78□□□□□ -0.36
IRF1-211ENST00000613424 NOTCH3Q9UM47 2321 aa12.77□□□□□ -0.36
IRF1-211ENST00000613424 MFSD2BA6NFX1 497 aa12.77□□□□□ -0.37
IRF1-211ENST00000613424 ADAP1O75689 374 aa12.77□□□□□ -0.37
IRF1-211ENST00000613424 SLC25A6P12236 298 aa12.77□□□□□ -0.37
IRF1-211ENST00000613424 HOXD3P31249 432 aaPredicted RBP12.77□□□□□ -0.37
IRF1-211ENST00000613424 SNCAP37840 140 aa12.77□□□□□ -0.37
IRF1-211ENST00000613424 SAMD5Q5TGI4 173 aa12.77□□□□□ -0.37
IRF1-211ENST00000613424 GGNBP1Q5YKI7 109 aa12.77□□□□□ -0.37
IRF1-211ENST00000613424 NRARPQ7Z6K4 114 aa12.77□□□□□ -0.37
IRF1-211ENST00000613424 DUSP18Q8NEJ0 188 aa12.77□□□□□ -0.37
IRF1-211ENST00000613424 MITD1Q8WV92 249 aa12.77□□□□□ -0.37
IRF1-211ENST00000613424 CXorf58Q96LI9 332 aa12.77□□□□□ -0.37
IRF1-211ENST00000613424 FBN3Q75N90 2809 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 TRBV7-1A0A0A6YYK4 115 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 IGHV3-21A0A0B4J1V1 117 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 CEBPZOSA8MTT3 80 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 PITX3O75364 302 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 ZP3P21754 424 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 DEFA1P59665 94 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 DEFA3P59666 94 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 TNFRSF9Q07011 255 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 FAM209BQ5JX69 171 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 CLEC19AQ6UXS0 136 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 C1QL4Q86Z23 238 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 OR1S1Q8NH92 325 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 VN1R17PQ8TDU5 208 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 CCDC140Q96MF4 163 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 HSPB7Q9UBY9 170 aa12.76□□□□□ -0.37
IRF1-211ENST00000613424 PPP5D1E7EU14 171 aa12.75□□□□□ -0.37
IRF1-211ENST00000613424 K7EIM0 57 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms