RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ZNF503-AS2A6NEH8 195 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 SCGB2A1O75556 95 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 SERF1AO75920 110 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 NDUFB4O95168 129 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 LYL1P12980 280 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 TIMP3P35625 211 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 WFDC3Q8IUB2 231 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 ZNF525Q8N782 197 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 OR10P1Q8NGE3 313 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 OR10G4Q8NGN3 311 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 OR10G9Q8NGN4 311 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 OR10G7Q8NGN6 311 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 TMEM170AQ8WVE7 144 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 CLEC5AQ9NY25 188 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 RPL39P5Q59GN2 51 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 FAM90A2PQ658T7 463 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 ABHD12Q8N2K0 398 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 FAM19A2Q8N3H0 131 aa9.06□□□□□ -0.96
FAM3A-221ENST00000612856 TCTAP57738 103 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 ACSM6Q6P461 480 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 BRD3OSQ6XYD6 125 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 TCTEX1D1Q8N7M0 179 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 OR5P3Q8WZ94 311 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 NEIL1Q96FI4 390 aaPredicted RBP9.05□□□□□ -0.96
FAM3A-221ENST00000612856 PLSCR4Q9NRQ2 329 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 CALYQ9NYX4 217 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 HSBP1O75506 76 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 ORM2P19652 201 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 PIMREGQ9BSJ6 248 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 GP6Q9HCN6 339 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 PLXNB1O43157 2135 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 ISG15P05161 165 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 CEACAM3P40198 252 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 LHFPL1Q86WI0 220 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 SSMEM1Q8WWF3 244 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 NABP1Q96AH0 204 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 UQCR10Q9UDW1 63 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 FBLL1A6NHQ2 334 aaKnown RBP9.05□□□□□ -0.96
FAM3A-221ENST00000612856 PF4V1P10720 104 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 MRPL54Q6P161 138 aaKnown RBP9.05□□□□□ -0.96
FAM3A-221ENST00000612856 OR13A1Q8NGR1 328 aa9.05□□□□□ -0.96
FAM3A-221ENST00000612856 IGHV3-49A0A0A0MS15 119 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 RPL36A-HNRNPH2H7BZ11 118 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 NUPR1O60356 82 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 MT-CO2P00403 227 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 VDAC1P21796 283 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 PLA2G5P39877 138 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 SLC38A11Q08AI6 406 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 ZNF672Q499Z4 452 aaPredicted RBP9.04□□□□□ -0.96
FAM3A-221ENST00000612856 STPG4Q8N801 248 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 DPF1Q92782 380 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 FLYWCH2Q96CP2 140 aaKnown RBP9.04□□□□□ -0.96
FAM3A-221ENST00000612856 MED12LQ86YW9 2145 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 HSBP1L1C9JCN9 74 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 CCL25O15444 150 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 KBTBD11O94819 623 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 PDLIM4P50479 330 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 LYPD6BQ8NI32 183 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 CORO2AQ92828 525 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 NUDT11Q96G61 164 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 RASL11BQ9BPW5 248 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 HES4Q9HCC6 221 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 IL19Q9UHD0 177 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 METRNQ9UJH8 293 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 TMEM210A6NLX4 147 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 J3QKU1 62 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 SLC17A3O00476 420 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 IGHV1-46P01743 117 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 HLA-DRB5Q30154 266 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 RNASEH2CQ8TDP1 164 aaKnown RBP9.04□□□□□ -0.96
FAM3A-221ENST00000612856 ANAPC16Q96DE5 110 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 OR4C12Q96R67 309 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 OR2W1Q9Y3N9 320 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 SLC25A15Q9Y619 301 aa9.04□□□□□ -0.96
FAM3A-221ENST00000612856 A0A1W2PRX2 142 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 TNFSF13O75888 250 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 SLC25A6P12236 298 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 ADMP35318 185 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 FBLN7Q53RD9 439 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 NUP210LQ5VU65 1888 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 DMXL1Q9Y485 3027 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 IGHG3P01860 377 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 PRR31Q5SQ13 230 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 SSC4DQ8WTU2 575 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 IGFBPL1Q8WX77 278 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 C1QTNF5Q9BXJ0 243 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 MRPL18Q9H0U6 180 aaKnown RBP9.03□□□□□ -0.96
FAM3A-221ENST00000612856 K7ERU9 68 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 SYNGR2O43760 224 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 COX5AP20674 150 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 COL8A2P25067 703 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 SUB1P53999 127 aaKnown RBP eCLIP9.03□□□□□ -0.96
FAM3A-221ENST00000612856 LINC00205P59089 165 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 IL15RAQ13261 267 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 HS3ST6Q96QI5 342 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 BPESC1Q9GZL8 116 aa9.03□□□□□ -0.96
FAM3A-221ENST00000612856 MRPS18CQ9Y3D5 142 aaKnown RBP9.03□□□□□ -0.96
FAM3A-221ENST00000612856 MBD3L4A6NDZ8 208 aaPredicted RBP9.02□□□□□ -0.97
FAM3A-221ENST00000612856 MBD3L3A6NE82 208 aaPredicted RBP9.02□□□□□ -0.97
FAM3A-221ENST00000612856 MBD3L5A6NJ08 208 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms