RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 TRGV3P03979 118 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 CRYGCP07315 174 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 CTRB1P17538 263 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 PSMB6P28072 239 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 MECP2P51608 486 aaKnown RBP6.66□□□□□ -1.34
SNCA-212ENST00000611107 PRCDQ00LT1 54 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 RUNX1Q01196 453 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 SPINK9Q5DT21 86 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 CTRB2Q6GPI1 263 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 C11orf87Q6NUJ2 197 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 MZT2BQ6NZ67 158 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 LYG2Q86SG7 212 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 TTC9CQ8N5M4 171 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 OR1N2Q8NGR9 330 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 OR4A16Q8NH70 328 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 ENKURQ8TC29 256 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 DLX4Q92988 240 aaPredicted RBP6.66□□□□□ -1.34
SNCA-212ENST00000611107 RRNAD1Q96FB5 475 aaKnown RBP6.66□□□□□ -1.34
SNCA-212ENST00000611107 UBE2E2Q96LR5 201 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 PRR25Q96S07 402 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 SRSF8Q9BRL6 282 aaKnown RBP6.66□□□□□ -1.34
SNCA-212ENST00000611107 SLA2Q9H6Q3 261 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 KCNIP3Q9Y2W7 256 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 TRBV9A0A0B4J1U6 114 aa6.65□□□□□ -1.34
SNCA-212ENST00000611107 NXPH3O95157 252 aa6.65□□□□□ -1.34
SNCA-212ENST00000611107 H2AFB2P0C5Z0 115 aa6.65□□□□□ -1.34
SNCA-212ENST00000611107 TRAPPC2P0DI81 140 aa6.65□□□□□ -1.34
SNCA-212ENST00000611107 TRAPPC2BP0DI82 140 aa6.65□□□□□ -1.34
SNCA-212ENST00000611107 MFAP2P55001 183 aa6.65□□□□□ -1.34
SNCA-212ENST00000611107 KLK9Q2XQG4 91 aa6.65□□□□□ -1.34
SNCA-212ENST00000611107 TMEM65Q6PI78 240 aa6.65□□□□□ -1.34
SNCA-212ENST00000611107 FANCD2OSQ96PS1 177 aa6.65□□□□□ -1.34
SNCA-212ENST00000611107 SEC22CQ9BRL7 303 aa6.65□□□□□ -1.34
SNCA-212ENST00000611107 HINT2Q9BX68 163 aa6.65□□□□□ -1.34
SNCA-212ENST00000611107 ZNF355PQ9NSJ1 428 aa6.65□□□□□ -1.34
SNCA-212ENST00000611107 FKBP11Q9NYL4 201 aa6.65□□□□□ -1.34
SNCA-212ENST00000611107 KLK9Q9UKQ9 250 aa6.65□□□□□ -1.34
SNCA-212ENST00000611107 IGLV11-55A0A075B6I3 123 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 ANKRD34BA5PLL1 514 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 MPTX1A8MV57 137 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 SEC14L6B5MCN3 397 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 ADAP1O75689 374 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 OR2J3O76001 311 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 DUS4LO95620 317 aaKnown RBP6.64□□□□□ -1.35
SNCA-212ENST00000611107 LGALS1P09382 135 aaKnown RBP6.64□□□□□ -1.35
SNCA-212ENST00000611107 SULT1A3P0DMM9 295 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 SULT1A4P0DMN0 295 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 OR13C7P0DN81 318 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 SPNP16150 400 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 EDN2P20800 178 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 DEFA1P59665 94 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 DEFA3P59666 94 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 HSPE1P61604 102 aaKnown RBP6.64□□□□□ -1.35
SNCA-212ENST00000611107 RHOGP84095 191 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 ZNF616Q08AN1 781 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 SMCO1Q147U7 214 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 C4orf46Q504U0 113 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 HSD17B13Q7Z5P4 300 aaPredicted RBP6.64□□□□□ -1.35
SNCA-212ENST00000611107 OR2C3Q8N628 320 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 ZNF114Q8NC26 417 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 DUSP18Q8NEJ0 188 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 MITD1Q8WV92 249 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 PLEKHA3Q9HB20 300 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 PALMDQ9NP74 551 aa6.64□□□□□ -1.35
SNCA-212ENST00000611107 F11RQ9Y624 299 aaKnown RBP6.64□□□□□ -1.35
SNCA-212ENST00000611107 MFSD2BA6NFX1 497 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 FAM223BA6NKX1 122 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 INS-IGF2F8WCM5 200 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 PITX3O75364 302 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 HOXB5P09067 269 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 HOXA1P49639 335 aaPredicted RBP6.63□□□□□ -1.35
SNCA-212ENST00000611107 TNFRSF9Q07011 255 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 EXOSC2Q13868 293 aaKnown RBP6.63□□□□□ -1.35
SNCA-212ENST00000611107 C15orf32Q32M92 178 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 GGNBP1Q5YKI7 109 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 IL34Q6ZMJ4 242 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 FAM223AQ8IWN6 122 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 NECAP1Q8NC96 275 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 OR52E5Q8NH55 327 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 COQ8AQ8NI60 647 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 ZNF431Q8TF32 576 aaPredicted RBP6.63□□□□□ -1.35
SNCA-212ENST00000611107 CCDC140Q96MF4 163 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.63□□□□□ -1.35
SNCA-212ENST00000611107 HSPB7Q9UBY9 170 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 TMED3Q9Y3Q3 217 aa6.63□□□□□ -1.35
SNCA-212ENST00000611107 LSM4Q9Y4Z0 139 aaKnown RBP6.63□□□□□ -1.35
SNCA-212ENST00000611107 PIGBOS1A0A0B4J2F0 54 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 A0A1B0GU03 582 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 C13orf42A0A1B0GVH6 325 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 LINC01619G3V211 115 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 CCSO14618 274 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 NDUFB8O95169 186 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 PTTG1O95997 202 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 DHFRP00374 187 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 IFNA17P01571 189 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 IL5P05113 134 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 RNASE2P10153 161 aaKnown RBP6.62□□□□□ -1.35
SNCA-212ENST00000611107 SLC25A6P12236 298 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 SPCS3P61009 180 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 BSXQ3C1V8 233 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms