RNA–Protein interactions for RNA: ENST00000608158.5

CTCFL-215, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-215ENST00000608158 MPDU1O75352 247 aa13.23□□□□□ -0.29
CTCFL-215ENST00000608158 OR13C7P0DN81 318 aa13.23□□□□□ -0.29
CTCFL-215ENST00000608158 ZP3P21754 424 aa13.23□□□□□ -0.29
CTCFL-215ENST00000608158 EBI3Q14213 229 aa13.23□□□□□ -0.29
CTCFL-215ENST00000608158 ACSM6Q6P461 480 aa13.23□□□□□ -0.29
CTCFL-215ENST00000608158 ZNF709Q8N972 641 aa13.23□□□□□ -0.29
CTCFL-215ENST00000608158 PSMG3-AS1Q96PY0 264 aa13.23□□□□□ -0.29
CTCFL-215ENST00000608158 RPRMQ9NS64 109 aa13.23□□□□□ -0.29
CTCFL-215ENST00000608158 C17orf112F2Z3M2 114 aa13.22□□□□□ -0.29
CTCFL-215ENST00000608158 TMEM41BQ5BJD5 291 aa13.22□□□□□ -0.29
CTCFL-215ENST00000608158 RUSC1-AS1Q66K80 236 aa13.22□□□□□ -0.29
CTCFL-215ENST00000608158 LRRC75A-AS1Q8N1F1 130 aa13.22□□□□□ -0.29
CTCFL-215ENST00000608158 SRSF12Q8WXF0 261 aaKnown RBP13.22□□□□□ -0.29
CTCFL-215ENST00000608158 C1orf159Q96HA4 380 aa13.22□□□□□ -0.29
CTCFL-215ENST00000608158 LINC00052Q96N35 136 aa13.22□□□□□ -0.29
CTCFL-215ENST00000608158 P2RX4Q99571 388 aa13.22□□□□□ -0.29
CTCFL-215ENST00000608158 IGHV1-69DA0A0B4J2H0 117 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 TEX22C9J3V5 150 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 FCN1O00602 326 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 IGHV1-69P01742 117 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 AKR1C1Q04828 323 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 C5orf64Q2M2E5 130 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 MGST2Q99735 147 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 LSM4Q9Y4Z0 139 aaKnown RBP13.21□□□□□ -0.29
CTCFL-215ENST00000608158 POLQO75417 2590 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 TENM4Q6N022 2769 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 IGHV3OR16-10A0A075B7F0 116 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 A0A1B0GV50 99 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 REG1AP05451 166 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 H2AFB1P0C5Y9 115 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 AREGP15514 252 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 TMEM11P17152 192 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 RAB2AP61019 212 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 COMMD1Q8N668 190 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 ZNF114Q8NC26 417 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 RCC1LQ96I51 464 aaKnown RBP13.21□□□□□ -0.29
CTCFL-215ENST00000608158 GGTLC1Q9BX51 225 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 NPVFQ9HCQ7 196 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 HIF1ANQ9NWT6 349 aa13.21□□□□□ -0.29
CTCFL-215ENST00000608158 ANKRD17O75179 2603 aaKnown RBP13.21□□□□□ -0.3
CTCFL-215ENST00000608158 VPS13CQ709C8 3753 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 TRAV20A0A0B4J274 112 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 KRBOX1C9JBD0 128 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 SUB1P53999 127 aaKnown RBP eCLIP13.2□□□□□ -0.3
CTCFL-215ENST00000608158 SRSF3P84103 164 aaKnown RBP13.2□□□□□ -0.3
CTCFL-215ENST00000608158 CD69Q07108 199 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 FFAR4Q5NUL3 377 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 Q5PR19 223 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 SPSB3Q6PJ21 355 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 LFNGQ8NES3 379 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 BPIFCQ8NFQ6 507 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 RNASEH2CQ8TDP1 164 aaKnown RBP13.2□□□□□ -0.3
CTCFL-215ENST00000608158 DOPEY2Q9Y3R5 2298 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 NAV3Q8IVL0 2385 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 BRS3P32247 399 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 ZNF726P1Q15940 193 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 SLC16A13Q7RTY0 426 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 NARS2Q96I59 477 aaKnown RBP13.2□□□□□ -0.3
CTCFL-215ENST00000608158 TMEM231Q9H6L2 316 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 C7orf69Q9H7B7 122 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 FAM96BQ9Y3D0 163 aa13.2□□□□□ -0.3
CTCFL-215ENST00000608158 CSMD2Q7Z408 3487 aa13.19□□□□□ -0.3
CTCFL-215ENST00000608158 NAV2Q8IVL1 2488 aa13.19□□□□□ -0.3
CTCFL-215ENST00000608158 BTBD17A6NE02 478 aa13.19□□□□□ -0.3
CTCFL-215ENST00000608158 FAM106CPP0CH98 169 aa13.19□□□□□ -0.3
CTCFL-215ENST00000608158 APELAP0DMC3 54 aa13.19□□□□□ -0.3
CTCFL-215ENST00000608158 GATA3P23771 443 aa13.19□□□□□ -0.3
CTCFL-215ENST00000608158 FAM120AOSQ5T036 256 aa13.19□□□□□ -0.3
CTCFL-215ENST00000608158 HIST2H2BCQ6DN03 193 aa13.19□□□□□ -0.3
CTCFL-215ENST00000608158 TEPPQ6URK8 271 aa13.19□□□□□ -0.3
CTCFL-215ENST00000608158 SRSF8Q9BRL6 282 aaKnown RBP13.19□□□□□ -0.3
CTCFL-215ENST00000608158 KCNIP2Q9NS61 270 aa13.19□□□□□ -0.3
CTCFL-215ENST00000608158 SOX15O60248 233 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 HBE1P02100 147 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 MBP02144 154 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 IGHV4-38-2P0DP08 117 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 OPRK1P41145 380 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 LOXL1Q08397 574 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-215ENST00000608158 PVRIGQ6DKI7 326 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 BRD3OSQ6XYD6 125 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 SSX7Q7RTT5 188 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 LINC01356Q8N9X3 169 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 SFT2D1Q8WV19 159 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 MBD6Q96DN6 1003 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 ABCA12Q86UK0 2595 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 NCBP2LA6PVI3 153 aaKnown RBP13.18□□□□□ -0.3
CTCFL-215ENST00000608158 CNIH1O95406 144 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 C19orf35Q6ZS72 473 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 TMEM144Q7Z5S9 345 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 RPP25LQ8N5L8 163 aaKnown RBP13.18□□□□□ -0.3
CTCFL-215ENST00000608158 SSMEM1Q8WWF3 244 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 CACNG8Q8WXS5 425 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 SLC35E1Q96K37 410 aa13.18□□□□□ -0.3
CTCFL-215ENST00000608158 TRAV1-1A0A0B4J248 108 aa13.17□□□□□ -0.3
CTCFL-215ENST00000608158 PLXNB1O43157 2135 aa13.17□□□□□ -0.3
CTCFL-215ENST00000608158 GPX4P36969 197 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-215ENST00000608158 GAMTQ14353 236 aa13.17□□□□□ -0.3
CTCFL-215ENST00000608158 OR1P1Q8NH06 330 aa13.17□□□□□ -0.3
CTCFL-215ENST00000608158 ABHD5Q8WTS1 349 aa13.17□□□□□ -0.3
CTCFL-215ENST00000608158 FNDC4Q9H6D8 234 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms