RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 PRNDQ9UKY0 176 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 PPIAL4CA0A0B4J2A2 164 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 NDUFB4O95168 129 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 OR10J4P0C629 311 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 PPIAL4GP0DN37 164 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 VWC2Q2TAL6 325 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 ELOVL1Q9BW60 279 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 TNFRSF13BO14836 293 aaPredicted RBP12.87□□□□□ -0.35
CTSA-214ENST00000606788 ELOBQ15370 118 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 ASPHD1Q5U4P2 390 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 MIR17HGQ75NE6 70 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 OR52E5Q8NH55 327 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 MBP02144 154 aa12.86□□□□□ -0.35
CTSA-214ENST00000606788 CHRNA7P36544 502 aa12.86□□□□□ -0.35
CTSA-214ENST00000606788 PRCDQ00LT1 54 aa12.86□□□□□ -0.35
CTSA-214ENST00000606788 RUSC1-AS1Q66K80 236 aa12.86□□□□□ -0.35
CTSA-214ENST00000606788 TMEM133Q9H2Q1 129 aa12.86□□□□□ -0.35
CTSA-214ENST00000606788 EPG5Q9HCE0 2579 aa12.86□□□□□ -0.35
CTSA-214ENST00000606788 ITGB1BP1O14713 200 aa12.86□□□□□ -0.35
CTSA-214ENST00000606788 WT1-ASQ06250 92 aa12.86□□□□□ -0.35
CTSA-214ENST00000606788 CENPVQ7Z7K6 275 aaPredicted RBP12.86□□□□□ -0.35
CTSA-214ENST00000606788 LINC00574Q9H8X3 128 aa12.86□□□□□ -0.35
CTSA-214ENST00000606788 SDF2L1Q9HCN8 221 aa12.86□□□□□ -0.35
CTSA-214ENST00000606788 C22orf46C9J442 243 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 OPRK1P41145 380 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 TNXAQ16473 311 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 NCOR1P1Q9H4R4 102 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 LRRK2Q5S007 2527 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 IGHV2-26A0A0B4J1V2 119 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 DLX6P56179 175 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 FABP9Q0Z7S8 132 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 GAMTQ14353 236 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 EFNB3Q15768 340 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 SPNS3Q6ZMD2 512 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 OR5AN1Q8NGI8 311 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 OR4C13Q8NGP0 309 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 UHRF2Q96PU4 802 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 PARD6GQ9BYG4 376 aaPredicted RBP12.85□□□□□ -0.35
CTSA-214ENST00000606788 SMDT1Q9H4I9 107 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 GSX1Q9H4S2 264 aaPredicted RBP12.85□□□□□ -0.35
CTSA-214ENST00000606788 BIN3Q9NQY0 253 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 PPOXP50336 477 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 C16orf82Q7Z2V1 217 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 MRPL36Q9P0J6 103 aaKnown RBP12.85□□□□□ -0.35
CTSA-214ENST00000606788 CELSR2Q9HCU4 2923 aa12.85□□□□□ -0.35
CTSA-214ENST00000606788 USP9YO00507 2555 aaPredicted RBP12.84□□□□□ -0.35
CTSA-214ENST00000606788 TMEM241Q24JQ0 296 aa12.84□□□□□ -0.35
CTSA-214ENST00000606788 ZNF114Q8NC26 417 aa12.84□□□□□ -0.35
CTSA-214ENST00000606788 MISP3Q96FF7 219 aa12.84□□□□□ -0.35
CTSA-214ENST00000606788 UBTD1Q9HAC8 227 aa12.84□□□□□ -0.35
CTSA-214ENST00000606788 GAB2Q9UQC2 676 aa12.84□□□□□ -0.35
CTSA-214ENST00000606788 WASHC3Q9Y3C0 194 aa12.84□□□□□ -0.35
CTSA-214ENST00000606788 INSIG2Q9Y5U4 225 aa12.84□□□□□ -0.35
CTSA-214ENST00000606788 TRAV5A0A0B4J249 113 aa12.84□□□□□ -0.35
CTSA-214ENST00000606788 SCO2A0A1W2PP80 73 aa12.84□□□□□ -0.35
CTSA-214ENST00000606788 FAM90A9PA6NNJ1 464 aa12.84□□□□□ -0.35
CTSA-214ENST00000606788 TRGC2P03986 189 aa12.84□□□□□ -0.35
CTSA-214ENST00000606788 RNASE2P10153 161 aaKnown RBP12.84□□□□□ -0.35
CTSA-214ENST00000606788 AARDQ4LEZ3 155 aa12.84□□□□□ -0.35
CTSA-214ENST00000606788 FBXL15Q9H469 300 aa12.84□□□□□ -0.35
CTSA-214ENST00000606788 OR7C2O60412 319 aa12.83□□□□□ -0.36
CTSA-214ENST00000606788 AREGP15514 252 aa12.83□□□□□ -0.36
CTSA-214ENST00000606788 GNLYP22749 145 aa12.83□□□□□ -0.36
CTSA-214ENST00000606788 RPL23P62829 140 aaKnown RBP12.83□□□□□ -0.36
CTSA-214ENST00000606788 LDLRAD2Q5SZI1 272 aa12.83□□□□□ -0.36
CTSA-214ENST00000606788 ZNF841Q6ZN19 808 aa12.83□□□□□ -0.36
CTSA-214ENST00000606788 LPAR2Q9HBW0 351 aa12.83□□□□□ -0.36
CTSA-214ENST00000606788 YTHDF2Q9Y5A9 579 aaKnown RBP12.83□□□□□ -0.36
CTSA-214ENST00000606788 CGB1A6NKQ9 187 aa12.83□□□□□ -0.36
CTSA-214ENST00000606788 ZNF90Q03938 601 aa12.83□□□□□ -0.36
CTSA-214ENST00000606788 PLGLAQ15195 96 aa12.83□□□□□ -0.36
CTSA-214ENST00000606788 MORN5Q5VZ52 161 aa12.83□□□□□ -0.36
CTSA-214ENST00000606788 OR1L8Q8NGR8 309 aa12.83□□□□□ -0.36
CTSA-214ENST00000606788 OSR1Q8TAX0 266 aaPredicted RBP12.83□□□□□ -0.36
CTSA-214ENST00000606788 S4R3C0 116 aa12.83□□□□□ -0.36
CTSA-214ENST00000606788 MOSP00540 346 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 NDUFA6P56556 154 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 BSXQ3C1V8 233 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 NPIPB3Q92617 1050 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 ST6GALNAC6Q969X2 333 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 NEIL1Q96FI4 390 aaPredicted RBP12.82□□□□□ -0.36
CTSA-214ENST00000606788 FAM103A1Q9BTL3 118 aaKnown RBP12.82□□□□□ -0.36
CTSA-214ENST00000606788 FNDC4Q9H6D8 234 aaPredicted RBP12.82□□□□□ -0.36
CTSA-214ENST00000606788 LSM4Q9Y4Z0 139 aaKnown RBP12.82□□□□□ -0.36
CTSA-214ENST00000606788 PSG5Q15238 335 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 UNQ6494/PRO21346Q6UXR6 183 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 RPEQ96AT9 228 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 TMEM186Q96B77 213 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 BET1LQ9NYM9 111 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 CSPG4Q6UVK1 2322 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 A0A1W2PPI3 338 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 A0A1W2PPQ1 181 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 FCN1O00602 326 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 IGLV2-23P01705 113 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 ERHP84090 104 aaKnown RBP12.82□□□□□ -0.36
CTSA-214ENST00000606788 SLC16A13Q7RTY0 426 aa12.82□□□□□ -0.36
CTSA-214ENST00000606788 ZNF462Q96JM2 2506 aa12.81□□□□□ -0.36
CTSA-214ENST00000606788 DLL1O00548 723 aa12.81□□□□□ -0.36
CTSA-214ENST00000606788 IGHV2-70P01814 119 aa12.81□□□□□ -0.36
CTSA-214ENST00000606788 FAM3BP58499 235 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms