RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 ZNF506Q5JVG8 444 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 C8orf82Q6P1X6 216 aaPredicted RBP4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 SPATA12Q7Z6I5 190 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 BCL6BQ8N143 479 aaPredicted RBP4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 OR2T6Q8NHC8 308 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 BORCS8Q96FH0 119 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 TMEM242Q9NWH2 141 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 U3KQE9 123 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 ATG2BQ96BY7 2078 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 SCN5AQ14524 2016 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 hCG_1818297A0A087WSY0 165 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 SAA2-SAA4A0A096LPE2 208 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 A0A1B0GWB2 263 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 TCRBV5S1A1TA0A578 114 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 A8MT66 165 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 PAX4O43316 350 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 CD3DP04234 171 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 LINC00869P0C866 280 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 SAA4P35542 130 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 ZNF90Q03938 601 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 IL15RAQ13261 267 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 GAGE2AQ6NT46 116 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 SLC25A34Q6PIV7 304 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 RPS19BP1Q86WX3 136 aaKnown RBP4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 ZNF564Q8TBZ8 553 aaPredicted RBP4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 TSACCQ96A04 125 aaPredicted RBP4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 ATXN7L3BQ96GX2 97 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 PLA2G2FQ9BZM2 168 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 TMEM191AQ9H0A3 160 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 PLEKHF2Q9H8W4 249 aa4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 F11RQ9Y624 299 aaKnown RBP4.71□□□□□ -1.66
COL4A3BP-207ENST00000604926 SNCGO76070 127 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 WNT1P04628 370 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 CD58P19256 250 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 RPS4Y1P22090 263 aaKnown RBP4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 SLC25A11Q02978 314 aaKnown RBP4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 LRRC37A5PQ49AS3 106 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 ZNF101Q8IZC7 436 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 RYBPQ8N488 228 aaPredicted RBP4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 LINC00311Q8N616 119 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 ANKRD29Q8N6D5 301 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 SCGB1C1Q8TD33 95 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 TVP23CQ96ET8 276 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 FAM19A4Q96LR4 140 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 VGLL1Q99990 258 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 COQ4Q9Y3A0 265 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 UNC79Q9P2D8 2635 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 TMEM262E9PQX1 116 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 PROSCO94903 275 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 DUSP14O95147 198 aaKnown RBP4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 ATP5G1P05496 136 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 OR5AL1P0C617 328 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 PSMB3P49720 205 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 PAQR4Q8N4S7 273 aaPredicted RBP4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 KLHDC9Q8NEP7 349 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 OR8S1Q8NH09 359 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 RNF166Q96A37 237 aaPredicted RBP4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 ELSPBP1Q96BH3 223 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 FOXQ1Q9C009 403 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 BCL2L10Q9HD36 194 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 CHCHD2Q9Y6H1 151 aaPredicted RBP4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 PIKFYVEQ9Y2I7 2098 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 DOCK6Q96HP0 2047 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 ANKRD36A6QL64 1941 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 NUP210Q8TEM1 1887 aaPredicted RBP4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 MEIS3P1A6NDR6 274 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 DEDDO75618 318 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 APOMO95445 188 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 GHRHP01286 108 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 BCL2P10415 239 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 CFPP27918 469 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 ATP4BP51164 291 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 GFERP55789 205 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 TAF10Q12962 218 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 SLC25A44Q96H78 314 aaPredicted RBP4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 PDFQ9HBH1 243 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 RBM12B-AS1Q9P1G2 102 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 KCNE3Q9Y6H6 103 aa4.7□□□□□ -1.66
COL4A3BP-207ENST00000604926 TLCD2A6NGC4 264 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 FAM90A26D6RGX4 464 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 NAPSAO96009 420 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 FGF3P11487 239 aaPredicted RBP4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 ELK1P19419 428 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 PPP1CCP36873 323 aaKnown RBP4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 TCF15Q12870 199 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 C12orf74Q32Q52 190 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 ASPHD1Q5U4P2 390 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 RFLNAQ6ZTI6 216 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 LINC00596Q86U02 117 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 LMX1AQ8TE12 382 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 CHCHD5Q9BSY4 110 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 AAMDCQ9H7C9 122 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 DNAJB12Q9NXW2 375 aaKnown RBP4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 COMMD9Q9P000 198 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 COL5A1P20908 1838 aaPredicted RBP4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 TRAV9-2A0A087WT02 112 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 TRAV4A0A0B4J268 109 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 TRDV1A0A1B0GX56 115 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 DPRXA6NFQ7 191 aa4.69□□□□□ -1.66
COL4A3BP-207ENST00000604926 LYZL6O75951 148 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms