RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 UQCC3Q6UW78 93 aa9.8□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 C9orf139Q6ZV77 190 aa9.8□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 C16orf82Q7Z2V1 217 aa9.8□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 COMMD7Q86VX2 200 aa9.8□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 LFNGQ8NES3 379 aa9.8□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 SRSF12Q8WXF0 261 aaKnown RBP9.8□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 HINT2Q9BX68 163 aa9.8□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 SH3BGRL3Q9H299 93 aa9.8□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 FBXL15Q9H469 300 aa9.8□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 LSM4Q9Y4Z0 139 aaKnown RBP9.8□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 NAV2Q8IVL1 2488 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 TRAV1-1A0A0B4J248 108 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 A0A1B0GW64 132 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 MFSD2BA6NFX1 497 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 TEX22C9J3V5 150 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 FSHBP01225 129 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 FGF7P21781 194 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 SSBP2P81877 361 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 PJVKQ0ZLH3 352 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 RAB31Q13636 194 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 TUSC1Q2TAM9 212 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 TMEM144Q7Z5S9 345 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 SLC7A5P1Q8MH63 180 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 ZNF709Q8N972 641 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 TMEM68Q96MH6 324 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 NPCDR1Q9BY65 106 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 TACC2O95359 2948 aa9.79□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 APCP25054 2843 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 A0A1W2PRD5 423 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 A0A1W2PRF3 423 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 A0A1W2PRM7 423 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 NPIPB5A8MRT5 1133 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 RNF223E7ERA6 249 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 E7EUB6 86 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 TEX46H3BTG2 121 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 M0QZK8 103 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 CYB5BO43169 146 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 HBE1P02100 147 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 CRYGCP07315 174 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 OR13C7P0DN81 318 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 MYOD1P15172 320 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 OPRK1P41145 380 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 CAMLGP49069 296 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 RUNX1Q01196 453 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 KLK9Q2XQG4 91 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 TMEM41BQ5BJD5 291 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 PXDC1Q5TGL8 231 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 TEPPQ6URK8 271 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 BTNL8Q6UX41 500 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 TREML4Q6UXN2 200 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 TMEM182Q6ZP80 229 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 Q6ZRG5 221 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 Q8N9W7 124 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 OR10W1Q8NGF6 305 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 C17orf50Q8WW18 174 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 CXorf58Q96LI9 332 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 Q96MF0 132 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 P2RX4Q99571 388 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 PLA2G2EQ9NZK7 142 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 PITPNC1Q9UKF7 332 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 KLK9Q9UKQ9 250 aa9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 F11RQ9Y624 299 aaKnown RBP9.78□□□□□ -0.84
NEDD8-MDP1-203ENST00000604306 CNIH1O95406 144 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 PRH1P02810 166 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 OPN1MWP04001 364 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 OPN1MW2P0DN77 364 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 OPN1MW3P0DN78 364 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 RAB2AP61019 212 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 FXYD3Q14802 87 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 ARSJQ5FYB0 599 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 KLF17Q5JT82 389 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 C10orf55Q5SWW7 151 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 CYB5R2Q6BCY4 276 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 MARC2Q969Z3 335 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 SLC35E1Q96K37 410 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 RBM14Q96PK6 669 aaKnown RBP9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 RSG1Q9BU20 258 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 SMDT1Q9H4I9 107 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 MOB4Q9Y3A3 225 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 FAM96BQ9Y3D0 163 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 CELSR2Q9HCU4 2923 aa9.77□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 ABCA12Q86UK0 2595 aa9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 TGFAP01135 160 aa9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 IGHV4-38-2P0DP08 117 aa9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 CTRB1P17538 263 aa9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 RPL29P47914 159 aaKnown RBP9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 CRIP2P52943 208 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 PMS2P11Q13670 270 aa9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 CTRB2Q6GPI1 263 aa9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 SLC16A13Q7RTY0 426 aa9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 NANPQ8TBE9 248 aa9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 C22orf15Q8WYQ4 148 aa9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 ARPC1AQ92747 370 aa9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 RASL11BQ9BPW5 248 aa9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 C19orf24Q9BVV8 132 aa9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 ZNF580Q9UK33 172 aa9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 CREBBPQ92793 2442 aa9.76□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 A0A0U1RQK1 487 aa9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 NCBP2LA6PVI3 153 aaKnown RBP9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 FCN1O00602 326 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms