RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 C19orf35Q6ZS72 473 aa12.81□□□□□ -0.36
PPFIA3-206ENST00000602655 PLPPR2Q96GM1 343 aa12.81□□□□□ -0.36
PPFIA3-206ENST00000602655 SYNGR3O43761 229 aa12.81□□□□□ -0.36
PPFIA3-206ENST00000602655 NPY1RP25929 384 aa12.81□□□□□ -0.36
PPFIA3-206ENST00000602655 C10orf128Q5T292 105 aa12.81□□□□□ -0.36
PPFIA3-206ENST00000602655 WFDC12Q8WWY7 111 aa12.81□□□□□ -0.36
PPFIA3-206ENST00000602655 GCM1Q9NP62 436 aa12.81□□□□□ -0.36
PPFIA3-206ENST00000602655 NOTCH2Q04721 2471 aa12.8□□□□□ -0.36
PPFIA3-206ENST00000602655 TUSC2O75896 110 aa12.8□□□□□ -0.36
PPFIA3-206ENST00000602655 FAM71F2Q6NXP2 309 aa12.8□□□□□ -0.36
PPFIA3-206ENST00000602655 RDH5Q92781 318 aa12.8□□□□□ -0.36
PPFIA3-206ENST00000602655 NINJ1Q92982 152 aa12.8□□□□□ -0.36
PPFIA3-206ENST00000602655 MCRIP2Q9BUT9 160 aaKnown RBP12.8□□□□□ -0.36
PPFIA3-206ENST00000602655 TECRQ9NZ01 308 aaKnown RBP12.8□□□□□ -0.36
PPFIA3-206ENST00000602655 RBPJQ06330 500 aa12.8□□□□□ -0.36
PPFIA3-206ENST00000602655 OR10W1Q8NGF6 305 aa12.8□□□□□ -0.36
PPFIA3-206ENST00000602655 TSKUQ8WUA8 353 aa12.8□□□□□ -0.36
PPFIA3-206ENST00000602655 HS3ST6Q96QI5 342 aa12.8□□□□□ -0.36
PPFIA3-206ENST00000602655 OR8B2Q96RD0 313 aa12.8□□□□□ -0.36
PPFIA3-206ENST00000602655 ZNF331Q9NQX6 463 aaPredicted RBP12.8□□□□□ -0.36
PPFIA3-206ENST00000602655 C7orf71A4D174 169 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 OR4C46A6NHA9 309 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 MLNRO43193 412 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 ESDP10768 282 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 PCBD1P61457 104 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 C5orf17Q8NAS9 161 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 NANOS1Q8WY41 292 aaKnown RBP12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 HIVEP3Q5T1R4 2406 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 LRRK2Q5S007 2527 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 UBE2G1P62253 170 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 POLQO75417 2590 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 AZU1P20160 251 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 BVES-AS1Q5T3Y7 98 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 OR4F17Q8NGA8 305 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 NEUROG1Q92886 237 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 OBP2BQ9NPH6 170 aa12.79□□□□□ -0.36
PPFIA3-206ENST00000602655 TRBV20OR9-2A0A075B6H5 130 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 NPIPB13A6NJU9 1138 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 NPIPB4C9JG80 1138 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 CNN3Q15417 329 aaKnown RBP12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 H3BUT2 72 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 TNXAQ16473 311 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 PMCHL2Q9BQD1 86 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 MTCH1Q9NZJ7 389 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 THYN1Q9P016 225 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 IGKV1-27A0A075B6S5 117 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 FAM231BA6NCW3 169 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 DEGS1O15121 323 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 APCSP02743 223 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 IGHV1-2P23083 117 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 FAM27E3Q08E93 113 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 DOLPP1Q86YN1 238 aa12.78□□□□□ -0.36
PPFIA3-206ENST00000602655 WDR73Q6P4I2 378 aa12.77□□□□□ -0.36
PPFIA3-206ENST00000602655 ZNF826PQ6ZT77 177 aa12.77□□□□□ -0.36
PPFIA3-206ENST00000602655 FAM214BQ7L5A3 538 aa12.77□□□□□ -0.36
PPFIA3-206ENST00000602655 OR4S2Q8NH73 311 aa12.77□□□□□ -0.36
PPFIA3-206ENST00000602655 M0R1B8 84 aa12.77□□□□□ -0.37
PPFIA3-206ENST00000602655 ARF6P62330 175 aa12.77□□□□□ -0.37
PPFIA3-206ENST00000602655 RPL31P62899 125 aaKnown RBP12.77□□□□□ -0.37
PPFIA3-206ENST00000602655 RNPS1Q15287 305 aaKnown RBP12.77□□□□□ -0.37
PPFIA3-206ENST00000602655 PDLIM3Q53GG5 364 aaPredicted RBP12.77□□□□□ -0.37
PPFIA3-206ENST00000602655 SVEP1Q4LDE5 3571 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 H0Y980 276 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 SSTR5P35346 364 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 CAMPP49913 170 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 ZNF611Q8N823 705 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 TMEM147Q9BVK8 224 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 IGKV1-12A0A0C4DH73 117 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 SYNGR1O43759 233 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 IGKV1D-12P01611 117 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 IGHV3-13P01766 116 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 IGHV3-7P01780 117 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 LTC4SQ16873 150 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 TMEM211Q6ICI0 200 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 ZCCHC24Q8N2G6 241 aaKnown RBP12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 DEFB125Q8N687 156 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 OR8B3Q8NGG8 313 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 RNASE7Q9H1E1 156 aaKnown RBP12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 TRGV8A0A0C4DH27 118 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 GFRALQ6UXV0 394 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 OR1L1Q8NH94 360 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 ABCA1O95477 2261 aa12.76□□□□□ -0.37
PPFIA3-206ENST00000602655 CEACAM3P40198 252 aa12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 GPR6P46095 362 aaPredicted RBP12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 CEBPDP49716 269 aaPredicted RBP12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 LGALS4P56470 323 aa12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 LY6DQ14210 128 aa12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 ZNF295-AS1Q8N0V1 137 aa12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 RBMXL3Q8N7X1 1067 aaKnown RBP12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 G3V4G9 280 aa12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 LINC00869P0C866 280 aa12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 ARL14EPLP0DKL9 152 aa12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 LGALS7P47929 136 aa12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 RAB9AP51151 201 aa12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 CRIP3Q6Q6R5 217 aa12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 SIGMAR1Q99720 223 aa12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 HILPDAQ9Y5L2 63 aa12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 RHBDL1O75783 438 aa12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 SPSB1Q96BD6 273 aa12.75□□□□□ -0.37
PPFIA3-206ENST00000602655 GP6Q9HCN6 339 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms