RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 CMTM1Q8IZ96 169 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 TCTEX1D1Q8N7M0 179 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 Q8N9W7 124 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 SUMF2Q8NBJ7 301 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 BPIFCQ8NFQ6 507 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 OR4A4PQ8NGN8 299 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 OR1S2Q8NGQ3 325 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 PLPPR1Q8TBJ4 325 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 ST6GALNAC6Q969X2 333 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 GNPNAT1Q96EK6 184 aaPredicted RBP4.05□□□□□ -1.76
VRK3-226ENST00000602029 NARS2Q96I59 477 aaKnown RBP4.05□□□□□ -1.76
VRK3-226ENST00000602029 OR10C1Q96KK4 312 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 HSPB9Q9BQS6 159 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 TMEM222Q9H0R3 208 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 GNB4Q9HAV0 340 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 RAB9BQ9NP90 201 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 SLC2A9Q9NRM0 540 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 KCNIP1Q9NZI2 227 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 OR5AC2Q9NZP5 309 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 CACFD1Q9UGQ2 172 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 AK3Q9UIJ7 227 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 PRELID3BQ9Y3B1 194 aa4.05□□□□□ -1.76
VRK3-226ENST00000602029 TRAV24A0A0B4J272 114 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 A0A1W2PN81 502 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 FAM90A9PA6NNJ1 464 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 FAM90A26D6RGX4 464 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 F8W036 122 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 LINC01619G3V211 115 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 G3V318 75 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 H0Y980 276 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 GPR31O00270 319 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 TSPAN4O14817 238 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 ATP6V0E1O15342 81 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 TXNL1O43396 289 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 PITX3O75364 302 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 MED6O75586 246 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 ADAP1O75689 374 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 TUSC2O75896 110 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 DFFBO76075 338 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 IGHG4P01861 327 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 HBE1P02100 147 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 OR8U9P0C7N5 309 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 ATF4P18848 351 aaPredicted RBP4.04□□□□□ -1.76
VRK3-226ENST00000602029 GZMHP20718 246 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 CD1BP29016 333 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 FCGR2CP31995 323 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 CHRNA7P36544 502 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 TAGLN2P37802 199 aaKnown RBP4.04□□□□□ -1.76
VRK3-226ENST00000602029 KCNJ3P48549 501 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 TPPP2P59282 170 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 S100A10P60903 97 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 RAB2AP61019 212 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 GNB1P62873 340 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 DEFA5Q01523 94 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 PAX5Q02548 391 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 ZNF816Q0VGE8 651 aaPredicted RBP4.04□□□□□ -1.76
VRK3-226ENST00000602029 BTN1A1Q13410 526 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 RHEBQ15382 184 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 RNF212Q495C1 297 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 PXDC1Q5TGL8 231 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 Q6P435 159 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 ZNF880Q6PDB4 577 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 BTNL8Q6UX41 500 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 GTSCR1Q86UQ5 136 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 HAPLN4Q86UW8 402 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 GAPTQ8N292 157 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 C15orf54Q8N8G6 183 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 ZBTB34Q8NCN2 500 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 OR4D5Q8NGN0 318 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 TMED6Q8WW62 240 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 LSM10Q969L4 123 aaKnown RBP4.04□□□□□ -1.76
VRK3-226ENST00000602029 RRNAD1Q96FB5 475 aaKnown RBP4.04□□□□□ -1.76
VRK3-226ENST00000602029 UBE2E2Q96LR5 201 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 MS4A10Q96PG2 267 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 CLCC1Q96S66 551 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 SULT4A1Q9BR01 284 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 CABLES2Q9BTV7 478 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 PARD6GQ9BYG4 376 aaPredicted RBP4.04□□□□□ -1.76
VRK3-226ENST00000602029 KLK15Q9H2R5 256 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 SEBOXQ9HB31 216 aaPredicted RBP4.04□□□□□ -1.76
VRK3-226ENST00000602029 Q9N2K0 584 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 FBXL17Q9UF56 701 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 PRELID1Q9Y255 219 aa4.04□□□□□ -1.76
VRK3-226ENST00000602029 MUC4Q99102 2169 aa4.03□□□□□ -1.76
VRK3-226ENST00000602029 KMT2AQ03164 3969 aa4.03□□□□□ -1.76
VRK3-226ENST00000602029 C3orf85A0A1B0GTC6 90 aa4.03□□□□□ -1.76
VRK3-226ENST00000602029 A0A1B0GU03 582 aa4.03□□□□□ -1.76
VRK3-226ENST00000602029 MSGN1A6NI15 193 aa4.03□□□□□ -1.76
VRK3-226ENST00000602029 TRDCB7Z8K6 153 aa4.03□□□□□ -1.76
VRK3-226ENST00000602029 GEMIN2O14893 280 aaKnown RBP4.03□□□□□ -1.76
VRK3-226ENST00000602029 MPPED1O15442 326 aa4.03□□□□□ -1.76
VRK3-226ENST00000602029 NBR2O15453 112 aa4.03□□□□□ -1.76
VRK3-226ENST00000602029 IFNA4P05014 189 aa4.03□□□□□ -1.76
VRK3-226ENST00000602029 HOXB5P09067 269 aa4.03□□□□□ -1.76
VRK3-226ENST00000602029 OR5AC1P0C628 307 aa4.03□□□□□ -1.76
VRK3-226ENST00000602029 IGHV4-30-4P0DP06 118 aa4.03□□□□□ -1.76
VRK3-226ENST00000602029 SNCAP37840 140 aa4.03□□□□□ -1.76
VRK3-226ENST00000602029 NKX2-1P43699 371 aaPredicted RBP4.03□□□□□ -1.76
VRK3-226ENST00000602029 RAB9AP51151 201 aa4.03□□□□□ -1.76
VRK3-226ENST00000602029 TAS2R30P59541 319 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms