RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 IAPPP10997 89 aa11.24□□□□□ -0.61
UPF1-211ENST00000600868 ATP5IP56385 69 aaPredicted RBP11.24□□□□□ -0.61
UPF1-211ENST00000600868 TAS2R30P59541 319 aa11.24□□□□□ -0.61
UPF1-211ENST00000600868 S100A10P60903 97 aa11.24□□□□□ -0.61
UPF1-211ENST00000600868 FOXL1Q12952 345 aa11.24□□□□□ -0.61
UPF1-211ENST00000600868 KLK9Q2XQG4 91 aa11.24□□□□□ -0.61
UPF1-211ENST00000600868 BSXQ3C1V8 233 aa11.24□□□□□ -0.61
UPF1-211ENST00000600868 CENPVQ7Z7K6 275 aaPredicted RBP11.24□□□□□ -0.61
UPF1-211ENST00000600868 WIPF2Q8TF74 440 aaPredicted RBP11.24□□□□□ -0.61
UPF1-211ENST00000600868 C11orf1Q9H5F2 150 aa11.24□□□□□ -0.61
UPF1-211ENST00000600868 KLK9Q9UKQ9 250 aa11.24□□□□□ -0.61
UPF1-211ENST00000600868 RNF114Q9Y508 228 aa11.24□□□□□ -0.61
UPF1-211ENST00000600868 TMEM89A2RUT3 159 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 H3BUA1 57 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 DEDDO75618 318 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 MPC2O95563 127 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 IGHG4P01861 327 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 RLN2P04090 185 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 PET100P0DJ07 73 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 RNASE2P10153 161 aaKnown RBP11.23□□□□□ -0.61
UPF1-211ENST00000600868 PVALBP20472 110 aaPredicted RBP11.23□□□□□ -0.61
UPF1-211ENST00000600868 MDKP21741 143 aaPredicted RBP11.23□□□□□ -0.61
UPF1-211ENST00000600868 SNCAP37840 140 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 HTR2BP41595 481 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 SUB1P53999 127 aaKnown RBP eCLIP11.23□□□□□ -0.61
UPF1-211ENST00000600868 PAX9P55771 341 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 RPP30P78346 268 aaKnown RBP11.23□□□□□ -0.61
UPF1-211ENST00000600868 CD83Q01151 205 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 KRTAP24-1Q3LI83 254 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 LRRC37A5PQ49AS3 106 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 COMMD1Q8N668 190 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 SLC24A4Q8NFF2 622 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 OR1L6Q8NGR2 347 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 OR1P1Q8NH06 330 aa11.23□□□□□ -0.61
UPF1-211ENST00000600868 F11RQ9Y624 299 aaKnown RBP11.23□□□□□ -0.61
UPF1-211ENST00000600868 H0YIZ8 118 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 L7N2F9 121 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 CYB5BO43169 146 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 TMEM50AO95807 157 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 DEFA4P12838 97 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 PROK1P58294 105 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 VAMP2P63027 116 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 FGL1Q08830 312 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 FOXE3Q13461 319 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 C2orf83Q53S99 150 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 PVRIGQ6DKI7 326 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 C11orf87Q6NUJ2 197 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 TEX38Q6PEX7 206 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 ZNF329Q86UD4 541 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 NOXA1Q86UR1 476 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 KLHDC1Q8N7A1 406 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 P2RX4Q99571 388 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 RNF126Q9BV68 326 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 PSENENQ9NZ42 101 aa11.22□□□□□ -0.61
UPF1-211ENST00000600868 TRBV9A0A0B4J1U6 114 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 E5RGE8 158 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 TSC22D2O75157 780 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 IFNA10P01566 189 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 ELANEP08246 267 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 LYL1P12980 280 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 HIST1H1BP16401 226 aaKnown RBP11.21□□□□□ -0.61
UPF1-211ENST00000600868 NPY1RP25929 384 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 PSMB8P28062 276 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 MFAP2P55001 183 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 RPL23AP62750 156 aaKnown RBP11.21□□□□□ -0.61
UPF1-211ENST00000600868 PRSS54Q6PEW0 395 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 C19orf35Q6ZS72 473 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 RNF152Q8N8N0 203 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 OR5AU1Q8NGC0 362 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 OR2T35Q8NGX2 323 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 ST6GAL2Q96JF0 529 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 FANCD2OSQ96PS1 177 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 SLA2Q9H6Q3 261 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 RANGRFQ9HD47 186 aaPredicted RBP11.21□□□□□ -0.61
UPF1-211ENST00000600868 OR5AC2Q9NZP5 309 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 STRAPQ9Y3F4 350 aaKnown RBP11.21□□□□□ -0.61
UPF1-211ENST00000600868 DMRT1Q9Y5R6 373 aa11.21□□□□□ -0.61
UPF1-211ENST00000600868 IGLV11-55A0A075B6I3 123 aa11.2□□□□□ -0.62
UPF1-211ENST00000600868 TRAV14DV4A0A0A6YYC5 116 aa11.2□□□□□ -0.62
UPF1-211ENST00000600868 C15orf62A8K5M9 175 aa11.2□□□□□ -0.62
UPF1-211ENST00000600868 CCNKO75909 580 aa11.2□□□□□ -0.62
UPF1-211ENST00000600868 Q5BKY6 102 aa11.2□□□□□ -0.62
UPF1-211ENST00000600868 SPANXN5Q5MJ07 72 aa11.2□□□□□ -0.62
UPF1-211ENST00000600868 SLC25A24Q6NUK1 477 aa11.2□□□□□ -0.62
UPF1-211ENST00000600868 C10orf99Q6UWK7 81 aa11.2□□□□□ -0.62
UPF1-211ENST00000600868 TMEM170AQ8WVE7 144 aa11.2□□□□□ -0.62
UPF1-211ENST00000600868 TMEM158Q8WZ71 300 aa11.2□□□□□ -0.62
UPF1-211ENST00000600868 OR4C12Q96R67 309 aa11.2□□□□□ -0.62
UPF1-211ENST00000600868 C19orf24Q9BVV8 132 aa11.2□□□□□ -0.62
UPF1-211ENST00000600868 ZNF355PQ9NSJ1 428 aa11.2□□□□□ -0.62
UPF1-211ENST00000600868 ATRQ13535 2644 aa11.2□□□□□ -0.62
UPF1-211ENST00000600868 HAX1O00165 279 aa11.19□□□□□ -0.62
UPF1-211ENST00000600868 CORTO00230 105 aa11.19□□□□□ -0.62
UPF1-211ENST00000600868 PRH1P02810 166 aa11.19□□□□□ -0.62
UPF1-211ENST00000600868 PF4V1P10720 104 aa11.19□□□□□ -0.62
UPF1-211ENST00000600868 SLC25A4P12235 298 aa11.19□□□□□ -0.62
UPF1-211ENST00000600868 P2RY1P47900 373 aa11.19□□□□□ -0.62
UPF1-211ENST00000600868 RAB9AP51151 201 aa11.19□□□□□ -0.62
UPF1-211ENST00000600868 RAB11AP62491 216 aa11.19□□□□□ -0.62
UPF1-211ENST00000600868 AWAT1Q58HT5 328 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms