RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 SLC35G3Q8N808 338 aa10.67□□□□□ -0.7
SNRPA-208ENST00000600456 OR52E5Q8NH55 327 aa10.67□□□□□ -0.7
SNRPA-208ENST00000600456 ALX4Q9H161 411 aaPredicted RBP10.67□□□□□ -0.7
SNRPA-208ENST00000600456 PLEKHA3Q9HB20 300 aa10.67□□□□□ -0.7
SNRPA-208ENST00000600456 IGHV4OR15-8A0A075B7B6 117 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 A0A087WW49 117 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 ST8SIA3O43173 380 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 UPK1BO75841 260 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 IFNA17P01571 189 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 ZP3P21754 424 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 DEFA5Q01523 94 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 ASAH1Q13510 395 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 EXOSC2Q13868 293 aaKnown RBP10.66□□□□□ -0.7
SNRPA-208ENST00000600456 NMSQ5H8A3 153 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 SAMD5Q5TGI4 173 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 MZT2BQ6NZ67 158 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 Q6ZRM9 215 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 C19orf35Q6ZS72 473 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 OR2C3Q8N628 320 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 GPR146Q96CH1 333 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 CXorf58Q96LI9 332 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 PEF1Q9UBV8 284 aaKnown RBP10.66□□□□□ -0.7
SNRPA-208ENST00000600456 CACNG5Q9UF02 275 aa10.66□□□□□ -0.7
SNRPA-208ENST00000600456 F11RQ9Y624 299 aaKnown RBP10.66□□□□□ -0.7
SNRPA-208ENST00000600456 NDUFB8O95169 186 aa10.65□□□□□ -0.7
SNRPA-208ENST00000600456 SULT1A3P0DMM9 295 aa10.65□□□□□ -0.7
SNRPA-208ENST00000600456 SULT1A4P0DMN0 295 aa10.65□□□□□ -0.7
SNRPA-208ENST00000600456 SPCS3P61009 180 aa10.65□□□□□ -0.7
SNRPA-208ENST00000600456 ERHP84090 104 aaKnown RBP10.65□□□□□ -0.7
SNRPA-208ENST00000600456 ANKRD55Q3KP44 614 aa10.65□□□□□ -0.7
SNRPA-208ENST00000600456 PDLIM3Q53GG5 364 aaPredicted RBP10.65□□□□□ -0.7
SNRPA-208ENST00000600456 LYZL2Q7Z4W2 148 aa10.65□□□□□ -0.7
SNRPA-208ENST00000600456 ZNF114Q8NC26 417 aa10.65□□□□□ -0.7
SNRPA-208ENST00000600456 OR1P1Q8NH06 330 aa10.65□□□□□ -0.7
SNRPA-208ENST00000600456 EEF1AKMT3Q96AZ1 226 aa10.65□□□□□ -0.7
SNRPA-208ENST00000600456 PRR13Q9NZ81 148 aa10.65□□□□□ -0.7
SNRPA-208ENST00000600456 TBC1D24Q9ULP9 559 aa10.65□□□□□ -0.7
SNRPA-208ENST00000600456 FLVCR2Q9UPI3 526 aa10.65□□□□□ -0.7
SNRPA-208ENST00000600456 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.64□□□□□ -0.71
SNRPA-208ENST00000600456 TRBV7-1A0A0A6YYK4 115 aa10.64□□□□□ -0.71
SNRPA-208ENST00000600456 A0A1B0GU03 582 aa10.64□□□□□ -0.71
SNRPA-208ENST00000600456 C9orf170A2RU37 121 aa10.64□□□□□ -0.71
SNRPA-208ENST00000600456 ANKRD34BA5PLL1 514 aa10.64□□□□□ -0.71
SNRPA-208ENST00000600456 HLA-AP01891 365 aaKnown RBP10.64□□□□□ -0.71
SNRPA-208ENST00000600456 TCRBP04435 133 aa10.64□□□□□ -0.71
SNRPA-208ENST00000600456 OR4E1P0C645 316 aa10.64□□□□□ -0.71
SNRPA-208ENST00000600456 IGLL1P15814 213 aa10.64□□□□□ -0.71
SNRPA-208ENST00000600456 SMCO1Q147U7 214 aa10.64□□□□□ -0.71
SNRPA-208ENST00000600456 KPRPQ5T749 579 aaPredicted RBP10.64□□□□□ -0.71
SNRPA-208ENST00000600456 VN1R17PQ8TDU5 208 aa10.64□□□□□ -0.71
SNRPA-208ENST00000600456 C20orf85Q9H1P6 137 aa10.64□□□□□ -0.71
SNRPA-208ENST00000600456 ENY2Q9NPA8 101 aa10.64□□□□□ -0.71
SNRPA-208ENST00000600456 TMED3Q9Y3Q3 217 aa10.64□□□□□ -0.71
SNRPA-208ENST00000600456 DMRT1Q9Y5R6 373 aa10.64□□□□□ -0.71
SNRPA-208ENST00000600456 FAM240BA0A1B0GVZ2 78 aa10.63□□□□□ -0.71
SNRPA-208ENST00000600456 G3V4G9 280 aa10.63□□□□□ -0.71
SNRPA-208ENST00000600456 SLC25A6P12236 298 aa10.63□□□□□ -0.71
SNRPA-208ENST00000600456 HOXD3P31249 432 aaPredicted RBP10.63□□□□□ -0.71
SNRPA-208ENST00000600456 SNCAP37840 140 aa10.63□□□□□ -0.71
SNRPA-208ENST00000600456 HOXA1P49639 335 aaPredicted RBP10.63□□□□□ -0.71
SNRPA-208ENST00000600456 DHRS2Q13268 280 aa10.63□□□□□ -0.71
SNRPA-208ENST00000600456 C4orf46Q504U0 113 aa10.63□□□□□ -0.71
SNRPA-208ENST00000600456 OXLD1Q5BKU9 147 aa10.63□□□□□ -0.71
SNRPA-208ENST00000600456 SLC25A24Q6NUK1 477 aa10.63□□□□□ -0.71
SNRPA-208ENST00000600456 LYG2Q86SG7 212 aa10.63□□□□□ -0.71
SNRPA-208ENST00000600456 COQ8AQ8NI60 647 aa10.63□□□□□ -0.71
SNRPA-208ENST00000600456 ATP6V0BQ99437 205 aa10.63□□□□□ -0.71
SNRPA-208ENST00000600456 NOTCH1P46531 2555 aa10.62□□□□□ -0.71
SNRPA-208ENST00000600456 OVOL1O14753 267 aa10.62□□□□□ -0.71
SNRPA-208ENST00000600456 TRBV12-3P01733 135 aa10.62□□□□□ -0.71
SNRPA-208ENST00000600456 ANXA7P20073 488 aaKnown RBP10.62□□□□□ -0.71
SNRPA-208ENST00000600456 SUB1P53999 127 aaKnown RBP eCLIP10.62□□□□□ -0.71
SNRPA-208ENST00000600456 SLURP1P55000 103 aa10.62□□□□□ -0.71
SNRPA-208ENST00000600456 MFAP2P55001 183 aa10.62□□□□□ -0.71
SNRPA-208ENST00000600456 SPINK9Q5DT21 86 aa10.62□□□□□ -0.71
SNRPA-208ENST00000600456 DCUN1D4Q92564 292 aa10.62□□□□□ -0.71
SNRPA-208ENST00000600456 DLX4Q92988 240 aaPredicted RBP10.62□□□□□ -0.71
SNRPA-208ENST00000600456 NUDT15Q9NV35 164 aa10.62□□□□□ -0.71
SNRPA-208ENST00000600456 HSPB7Q9UBY9 170 aa10.62□□□□□ -0.71
SNRPA-208ENST00000600456 CMYA5Q8N3K9 4069 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 NOTCH3Q9UM47 2321 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 MFSD2BA6NFX1 497 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 SEC14L6B5MCN3 397 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 BMPR1BO00238 502 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 WIPF1O43516 503 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 DEFA1P59665 94 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 DEFA3P59666 94 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 IFITM3Q01628 133 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 KLF5Q13887 457 aaPredicted RBP10.61□□□□□ -0.71
SNRPA-208ENST00000600456 TATDN3Q17R31 274 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 RPEL1Q2QD12 228 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 BEAN1Q3B7T3 259 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 C9orf66Q5T8R8 295 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 PVRIGQ6DKI7 326 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 ZNF502Q8TBZ5 544 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 CCDC140Q96MF4 163 aa10.61□□□□□ -0.71
SNRPA-208ENST00000600456 MEGF8Q7Z7M0 2845 aa10.6□□□□□ -0.71
SNRPA-208ENST00000600456 TRAV6A0A075B6T7 132 aa10.6□□□□□ -0.71
SNRPA-208ENST00000600456 CEBPZOSA8MTT3 80 aa10.6□□□□□ -0.71
SNRPA-208ENST00000600456 K7EIM0 57 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms