RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 ZNF57Q68EA5 555 aaPredicted RBP21.56■■□□□ 1.04
SSBP4-206ENST00000599699 CCDC140Q96MF4 163 aa21.56■■□□□ 1.04
SSBP4-206ENST00000599699 DMRT1Q9Y5R6 373 aa21.56■■□□□ 1.04
SSBP4-206ENST00000599699 F11RQ9Y624 299 aaKnown RBP21.56■■□□□ 1.04
SSBP4-206ENST00000599699 TRBV7-1A0A0A6YYK4 115 aa21.55■■□□□ 1.04
SSBP4-206ENST00000599699 GGCTO75223 188 aaKnown RBP21.55■■□□□ 1.04
SSBP4-206ENST00000599699 HLA-AP01891 365 aaKnown RBP21.55■■□□□ 1.04
SSBP4-206ENST00000599699 INPP1P49441 399 aa21.55■■□□□ 1.04
SSBP4-206ENST00000599699 GLYATL2Q8WU03 294 aa21.55■■□□□ 1.04
SSBP4-206ENST00000599699 SRRQ9GZT4 340 aa21.55■■□□□ 1.04
SSBP4-206ENST00000599699 KCNIP3Q9Y2W7 256 aa21.55■■□□□ 1.04
SSBP4-206ENST00000599699 A0A0B4J293 547 aa21.54■■□□□ 1.04
SSBP4-206ENST00000599699 CDS2O95674 445 aa21.54■■□□□ 1.04
SSBP4-206ENST00000599699 P0C879 139 aa21.54■■□□□ 1.04
SSBP4-206ENST00000599699 AKR1C4P17516 323 aa21.54■■□□□ 1.04
SSBP4-206ENST00000599699 PRCDQ00LT1 54 aa21.54■■□□□ 1.04
SSBP4-206ENST00000599699 HAPLN4Q86UW8 402 aa21.54■■□□□ 1.04
SSBP4-206ENST00000599699 PDCD10Q9BUL8 212 aa21.54■■□□□ 1.04
SSBP4-206ENST00000599699 PLEKHA3Q9HB20 300 aa21.54■■□□□ 1.04
SSBP4-206ENST00000599699 OR2C1O95371 312 aa21.53■■□□□ 1.04
SSBP4-206ENST00000599699 IFNA17P01571 189 aa21.53■■□□□ 1.04
SSBP4-206ENST00000599699 SPINK9Q5DT21 86 aa21.53■■□□□ 1.04
SSBP4-206ENST00000599699 TRIQKQ629K1 86 aa21.53■■□□□ 1.04
SSBP4-206ENST00000599699 OR1L6Q8NGR2 347 aa21.53■■□□□ 1.04
SSBP4-206ENST00000599699 RBPMSQ93062 196 aaKnown RBP21.53■■□□□ 1.04
SSBP4-206ENST00000599699 PEMTQ9UBM1 199 aa21.53■■□□□ 1.04
SSBP4-206ENST00000599699 CLEC3BP05452 202 aa21.52■■□□□ 1.04
SSBP4-206ENST00000599699 DCTN2Q13561 401 aaKnown RBP21.52■■□□□ 1.04
SSBP4-206ENST00000599699 TMEM268Q5VZI3 342 aa21.52■■□□□ 1.04
SSBP4-206ENST00000599699 SELENOHQ8IZQ5 122 aaKnown RBP21.52■■□□□ 1.04
SSBP4-206ENST00000599699 SLC35G3Q8N808 338 aa21.52■■□□□ 1.04
SSBP4-206ENST00000599699 LHFPL5Q8TAF8 219 aa21.52■■□□□ 1.04
SSBP4-206ENST00000599699 DEDD2Q8WXF8 326 aa21.52■■□□□ 1.04
SSBP4-206ENST00000599699 TMEM230Q96A57 120 aa21.52■■□□□ 1.04
SSBP4-206ENST00000599699 ZC4H2Q9NQZ6 224 aa21.52■■□□□ 1.04
SSBP4-206ENST00000599699 IGHV3-21A0A0B4J1V1 117 aa21.51■■□□□ 1.03
SSBP4-206ENST00000599699 A0A0G2JRQ6 117 aa21.51■■□□□ 1.03
SSBP4-206ENST00000599699 ST8SIA3O43173 380 aa21.51■■□□□ 1.03
SSBP4-206ENST00000599699 SPNP16150 400 aa21.51■■□□□ 1.03
SSBP4-206ENST00000599699 GPR183P32249 361 aa21.51■■□□□ 1.03
SSBP4-206ENST00000599699 MFAP2P55001 183 aa21.51■■□□□ 1.03
SSBP4-206ENST00000599699 ERHP84090 104 aaKnown RBP21.51■■□□□ 1.03
SSBP4-206ENST00000599699 TMED4Q7Z7H5 227 aa21.51■■□□□ 1.03
SSBP4-206ENST00000599699 FAM219AQ8IW50 185 aa21.51■■□□□ 1.03
SSBP4-206ENST00000599699 OR2C3Q8N628 320 aa21.51■■□□□ 1.03
SSBP4-206ENST00000599699 ZNF502Q8TBZ5 544 aa21.51■■□□□ 1.03
SSBP4-206ENST00000599699 VN1R17PQ8TDU5 208 aa21.51■■□□□ 1.03
SSBP4-206ENST00000599699 IL34Q6ZMJ4 242 aa21.5■■□□□ 1.03
SSBP4-206ENST00000599699 OR1P1Q8NH06 330 aa21.5■■□□□ 1.03
SSBP4-206ENST00000599699 CSN3P07498 182 aa21.49■■□□□ 1.03
SSBP4-206ENST00000599699 BAK1Q16611 211 aa21.49■■□□□ 1.03
SSBP4-206ENST00000599699 GALNT14Q96FL9 552 aa21.49■■□□□ 1.03
SSBP4-206ENST00000599699 PRR13Q9NZ81 148 aa21.49■■□□□ 1.03
SSBP4-206ENST00000599699 IGLV1-51P01701 117 aa21.48■■□□□ 1.03
SSBP4-206ENST00000599699 ANXA3P12429 323 aa21.48■■□□□ 1.03
SSBP4-206ENST00000599699 HOXA1P49639 335 aaPredicted RBP21.48■■□□□ 1.03
SSBP4-206ENST00000599699 TMEM187Q14656 261 aa21.48■■□□□ 1.03
SSBP4-206ENST00000599699 FAM106AQ4KMX7 169 aa21.48■■□□□ 1.03
SSBP4-206ENST00000599699 MISP3Q96FF7 219 aa21.48■■□□□ 1.03
SSBP4-206ENST00000599699 SLC25A21Q9BQT8 299 aaPredicted RBP21.48■■□□□ 1.03
SSBP4-206ENST00000599699 ENY2Q9NPA8 101 aa21.48■■□□□ 1.03
SSBP4-206ENST00000599699 TMEM56-RWDD3S4R434 201 aa21.48■■□□□ 1.03
SSBP4-206ENST00000599699 ZNF320A2RRD8 509 aa21.47■■□□□ 1.03
SSBP4-206ENST00000599699 SNCAP37840 140 aa21.47■■□□□ 1.03
SSBP4-206ENST00000599699 PLET1Q6UQ28 207 aa21.47■■□□□ 1.03
SSBP4-206ENST00000599699 Q6ZRM9 215 aa21.47■■□□□ 1.03
SSBP4-206ENST00000599699 GPHB5Q86YW7 130 aa21.47■■□□□ 1.03
SSBP4-206ENST00000599699 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.47■■□□□ 1.03
SSBP4-206ENST00000599699 C21orf62Q9NYP8 219 aa21.47■■□□□ 1.03
SSBP4-206ENST00000599699 LINC00854A0A1B0GVQ3 168 aa21.46■■□□□ 1.03
SSBP4-206ENST00000599699 GP9P14770 177 aa21.46■■□□□ 1.03
SSBP4-206ENST00000599699 UBAC2Q8NBM4 344 aa21.46■■□□□ 1.03
SSBP4-206ENST00000599699 SCARB1Q8WTV0 552 aa21.46■■□□□ 1.03
SSBP4-206ENST00000599699 IL22RA2Q969J5 263 aa21.46■■□□□ 1.03
SSBP4-206ENST00000599699 GPR146Q96CH1 333 aa21.46■■□□□ 1.03
SSBP4-206ENST00000599699 CACNG5Q9UF02 275 aa21.46■■□□□ 1.03
SSBP4-206ENST00000599699 OR2T8A6NH00 312 aa21.45■■□□□ 1.02
SSBP4-206ENST00000599699 SUPT4H1P63272 117 aaKnown RBP21.45■■□□□ 1.02
SSBP4-206ENST00000599699 ZNF114Q8NC26 417 aa21.45■■□□□ 1.02
SSBP4-206ENST00000599699 SIGLEC8Q9NYZ4 499 aa21.45■■□□□ 1.02
SSBP4-206ENST00000599699 K7EIM0 57 aa21.44■■□□□ 1.02
SSBP4-206ENST00000599699 LGALS9O00182 355 aa21.44■■□□□ 1.02
SSBP4-206ENST00000599699 TGOLN2O43493 480 aa21.44■■□□□ 1.02
SSBP4-206ENST00000599699 Q56UQ5 140 aa21.44■■□□□ 1.02
SSBP4-206ENST00000599699 SORL1Q92673 2214 aa21.44■■□□□ 1.02
SSBP4-206ENST00000599699 IGHV3-35A0A0C4DH35 117 aa21.43■■□□□ 1.02
SSBP4-206ENST00000599699 CCR6P51684 374 aa21.43■■□□□ 1.02
SSBP4-206ENST00000599699 SPCS3P61009 180 aa21.43■■□□□ 1.02
SSBP4-206ENST00000599699 SRPXP78539 464 aa21.43■■□□□ 1.02
SSBP4-206ENST00000599699 TMEM128Q5BJH2 165 aa21.43■■□□□ 1.02
SSBP4-206ENST00000599699 LGI3Q8N145 548 aa21.43■■□□□ 1.02
SSBP4-206ENST00000599699 DYNLRB2Q8TF09 96 aa21.43■■□□□ 1.02
SSBP4-206ENST00000599699 PINX1Q96BK5 328 aaKnown RBP21.43■■□□□ 1.02
SSBP4-206ENST00000599699 BSCL2Q96G97 398 aaPredicted RBP21.43■■□□□ 1.02
SSBP4-206ENST00000599699 SDHCQ99643 169 aaPredicted RBP21.43■■□□□ 1.02
SSBP4-206ENST00000599699 LSM4Q9Y4Z0 139 aaKnown RBP21.43■■□□□ 1.02
SSBP4-206ENST00000599699 NAP1L6A6NFF2 107 aa21.42■■□□□ 1.02
SSBP4-206ENST00000599699 C2orf70A6NJV1 201 aa21.42■■□□□ 1.02
SSBP4-206ENST00000599699 VAMP1P23763 118 aa21.42■■□□□ 1.02
SSBP4-206ENST00000599699 SUB1P53999 127 aaKnown RBP eCLIP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms