RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 Q6ZRM9 215 aa13.48□□□□□ -0.25
USHBP1-209ENST00000598570 OR2C3Q8N628 320 aa13.48□□□□□ -0.25
USHBP1-209ENST00000598570 OR1L6Q8NGR2 347 aa13.48□□□□□ -0.25
USHBP1-209ENST00000598570 OR1P1Q8NH06 330 aa13.48□□□□□ -0.25
USHBP1-209ENST00000598570 RBPMSQ93062 196 aaKnown RBP13.48□□□□□ -0.25
USHBP1-209ENST00000598570 CXorf58Q96LI9 332 aa13.48□□□□□ -0.25
USHBP1-209ENST00000598570 ANKRD34BA5PLL1 514 aa13.47□□□□□ -0.25
USHBP1-209ENST00000598570 REG1AP05451 166 aa13.47□□□□□ -0.25
USHBP1-209ENST00000598570 GPHB5Q86YW7 130 aa13.47□□□□□ -0.25
USHBP1-209ENST00000598570 OR52E5Q8NH55 327 aa13.47□□□□□ -0.25
USHBP1-209ENST00000598570 OR4A16Q8NH70 328 aa13.47□□□□□ -0.25
USHBP1-209ENST00000598570 ZNF502Q8TBZ5 544 aa13.47□□□□□ -0.25
USHBP1-209ENST00000598570 MCUBQ9NWR8 336 aa13.47□□□□□ -0.25
USHBP1-209ENST00000598570 COL7A1Q02388 2944 aa13.46□□□□□ -0.25
USHBP1-209ENST00000598570 WI2-2373I1.2A0A1W2PRP0 233 aa13.46□□□□□ -0.25
USHBP1-209ENST00000598570 NAP1L6A6NFF2 107 aa13.46□□□□□ -0.25
USHBP1-209ENST00000598570 LGALS9O00182 355 aa13.46□□□□□ -0.25
USHBP1-209ENST00000598570 PRB2P02812 416 aaPredicted RBP13.46□□□□□ -0.25
USHBP1-209ENST00000598570 IZUMO4Q1ZYL8 232 aa13.46□□□□□ -0.25
USHBP1-209ENST00000598570 SGPP2Q8IWX5 399 aa13.46□□□□□ -0.25
USHBP1-209ENST00000598570 LRTM2Q8N967 370 aa13.46□□□□□ -0.25
USHBP1-209ENST00000598570 THYN1Q9P016 225 aa13.46□□□□□ -0.25
USHBP1-209ENST00000598570 KCNIP3Q9Y2W7 256 aa13.46□□□□□ -0.25
USHBP1-209ENST00000598570 ST8SIA3O43173 380 aa13.45□□□□□ -0.26
USHBP1-209ENST00000598570 IGLV1-51P01701 117 aa13.45□□□□□ -0.26
USHBP1-209ENST00000598570 DEFA4P12838 97 aa13.45□□□□□ -0.26
USHBP1-209ENST00000598570 FCGR2BP31994 310 aaPredicted RBP13.45□□□□□ -0.26
USHBP1-209ENST00000598570 BSXQ3C1V8 233 aa13.45□□□□□ -0.26
USHBP1-209ENST00000598570 TMEM128Q5BJH2 165 aa13.45□□□□□ -0.26
USHBP1-209ENST00000598570 OR9G4Q8NGQ1 327 aa13.45□□□□□ -0.26
USHBP1-209ENST00000598570 EEF1AKMT3Q96AZ1 226 aa13.45□□□□□ -0.26
USHBP1-209ENST00000598570 MFSD2BA6NFX1 497 aa13.44□□□□□ -0.26
USHBP1-209ENST00000598570 F8W735 103 aaPredicted RBP13.44□□□□□ -0.26
USHBP1-209ENST00000598570 K7EIM0 57 aa13.44□□□□□ -0.26
USHBP1-209ENST00000598570 CYB5BO43169 146 aa13.44□□□□□ -0.26
USHBP1-209ENST00000598570 GGCTO75223 188 aaKnown RBP13.44□□□□□ -0.26
USHBP1-209ENST00000598570 HLA-AP01891 365 aaKnown RBP13.44□□□□□ -0.26
USHBP1-209ENST00000598570 CSN3P07498 182 aa13.44□□□□□ -0.26
USHBP1-209ENST00000598570 TRIM16LQ309B1 348 aa13.44□□□□□ -0.26
USHBP1-209ENST00000598570 NMSQ5H8A3 153 aa13.44□□□□□ -0.26
USHBP1-209ENST00000598570 RRNAD1Q96FB5 475 aaKnown RBP13.44□□□□□ -0.26
USHBP1-209ENST00000598570 C7orf50Q9BRJ6 194 aaKnown RBP13.44□□□□□ -0.26
USHBP1-209ENST00000598570 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.44□□□□□ -0.26
USHBP1-209ENST00000598570 CACFD1Q9UGQ2 172 aa13.44□□□□□ -0.26
USHBP1-209ENST00000598570 LSM4Q9Y4Z0 139 aaKnown RBP13.44□□□□□ -0.26
USHBP1-209ENST00000598570 A0A0B4J2A0 478 aa13.43□□□□□ -0.26
USHBP1-209ENST00000598570 I3L2K1 104 aa13.43□□□□□ -0.26
USHBP1-209ENST00000598570 CLEC3BP05452 202 aa13.43□□□□□ -0.26
USHBP1-209ENST00000598570 IL7P13232 177 aa13.43□□□□□ -0.26
USHBP1-209ENST00000598570 BTCP35070 178 aa13.43□□□□□ -0.26
USHBP1-209ENST00000598570 SYNJ2BPP57105 145 aa13.43□□□□□ -0.26
USHBP1-209ENST00000598570 UBE2MP61081 183 aaKnown RBP13.43□□□□□ -0.26
USHBP1-209ENST00000598570 TATDN3Q17R31 274 aa13.43□□□□□ -0.26
USHBP1-209ENST00000598570 ADAMTSL5Q6ZMM2 481 aa13.43□□□□□ -0.26
USHBP1-209ENST00000598570 GPR146Q96CH1 333 aa13.43□□□□□ -0.26
USHBP1-209ENST00000598570 ZNF414Q96IQ9 312 aa13.43□□□□□ -0.26
USHBP1-209ENST00000598570 ELOVL1Q9BW60 279 aa13.43□□□□□ -0.26
USHBP1-209ENST00000598570 SHPKQ9UHJ6 478 aa13.43□□□□□ -0.26
USHBP1-209ENST00000598570 PIGBOS1A0A0B4J2F0 54 aa13.42□□□□□ -0.26
USHBP1-209ENST00000598570 NDUFB6O95139 128 aa13.42□□□□□ -0.26
USHBP1-209ENST00000598570 AKR1C2P52895 323 aa13.42□□□□□ -0.26
USHBP1-209ENST00000598570 SPCS3P61009 180 aa13.42□□□□□ -0.26
USHBP1-209ENST00000598570 SRPXP78539 464 aa13.42□□□□□ -0.26
USHBP1-209ENST00000598570 RBMS2Q15434 407 aaKnown RBP13.42□□□□□ -0.26
USHBP1-209ENST00000598570 RPEL1Q2QD12 228 aa13.42□□□□□ -0.26
USHBP1-209ENST00000598570 CNPY1Q3B7I2 92 aa13.42□□□□□ -0.26
USHBP1-209ENST00000598570 SCARB1Q8WTV0 552 aa13.42□□□□□ -0.26
USHBP1-209ENST00000598570 DUXBA0A1W2PPF3 345 aa13.41□□□□□ -0.26
USHBP1-209ENST00000598570 A8MWP6 167 aa13.41□□□□□ -0.26
USHBP1-209ENST00000598570 PPP5D1E7EU14 171 aa13.41□□□□□ -0.26
USHBP1-209ENST00000598570 PLA2G10O15496 165 aa13.41□□□□□ -0.26
USHBP1-209ENST00000598570 AKR1C4P17516 323 aa13.41□□□□□ -0.26
USHBP1-209ENST00000598570 TMEM268Q5VZI3 342 aa13.41□□□□□ -0.26
USHBP1-209ENST00000598570 SLC25A24Q6NUK1 477 aa13.41□□□□□ -0.26
USHBP1-209ENST00000598570 CLEC19AQ6UXS0 136 aa13.41□□□□□ -0.26
USHBP1-209ENST00000598570 TXN2Q99757 166 aa13.41□□□□□ -0.26
USHBP1-209ENST00000598570 HINT2Q9BX68 163 aa13.41□□□□□ -0.26
USHBP1-209ENST00000598570 ZNF436Q9C0F3 470 aaPredicted RBP13.41□□□□□ -0.26
USHBP1-209ENST00000598570 ZNF256Q9Y2P7 627 aaPredicted RBP13.41□□□□□ -0.26
USHBP1-209ENST00000598570 PITX3O75364 302 aa13.4□□□□□ -0.26
USHBP1-209ENST00000598570 SAP30O75446 220 aa13.4□□□□□ -0.26
USHBP1-209ENST00000598570 OR2C1O95371 312 aa13.4□□□□□ -0.26
USHBP1-209ENST00000598570 C8orf88P0DMB2 117 aa13.4□□□□□ -0.26
USHBP1-209ENST00000598570 ARL3P36405 182 aa13.4□□□□□ -0.26
USHBP1-209ENST00000598570 ERHP84090 104 aaKnown RBP13.4□□□□□ -0.26
USHBP1-209ENST00000598570 ZNF57Q68EA5 555 aaPredicted RBP13.4□□□□□ -0.26
USHBP1-209ENST00000598570 SPSB3Q6PJ21 355 aa13.4□□□□□ -0.26
USHBP1-209ENST00000598570 LGI3Q8N145 548 aa13.4□□□□□ -0.26
USHBP1-209ENST00000598570 SLC35G3Q8N808 338 aa13.4□□□□□ -0.26
USHBP1-209ENST00000598570 OR4C12Q96R67 309 aa13.4□□□□□ -0.26
USHBP1-209ENST00000598570 PLEKHA3Q9HB20 300 aa13.4□□□□□ -0.26
USHBP1-209ENST00000598570 BATF3Q9NR55 127 aa13.4□□□□□ -0.26
USHBP1-209ENST00000598570 RNASE2P10153 161 aaKnown RBP13.39□□□□□ -0.27
USHBP1-209ENST00000598570 SLC25A6P12236 298 aa13.39□□□□□ -0.27
USHBP1-209ENST00000598570 TRIQKQ629K1 86 aa13.39□□□□□ -0.27
USHBP1-209ENST00000598570 LYZL2Q7Z4W2 148 aa13.39□□□□□ -0.27
USHBP1-209ENST00000598570 OR2K2Q8NGT1 345 aa13.39□□□□□ -0.27
USHBP1-209ENST00000598570 MRAPQ8TCY5 172 aa13.39□□□□□ -0.27
USHBP1-209ENST00000598570 BSCL2Q96G97 398 aaPredicted RBP13.39□□□□□ -0.27
USHBP1-209ENST00000598570 CCDC32Q9BV29 185 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms