RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 IGKV1-39P01597 117 aa11.07□□□□□ -0.64
XRCC1-208ENST00000598422 IGKV1D-39P04432 117 aa11.07□□□□□ -0.64
XRCC1-208ENST00000598422 CBLN1P23435 193 aa11.07□□□□□ -0.64
XRCC1-208ENST00000598422 DEFB114Q30KQ6 69 aa11.07□□□□□ -0.64
XRCC1-208ENST00000598422 ADAMTSL5Q6ZMM2 481 aa11.07□□□□□ -0.64
XRCC1-208ENST00000598422 UBAC2Q8NBM4 344 aa11.07□□□□□ -0.64
XRCC1-208ENST00000598422 TERB2Q8NHR7 220 aa11.07□□□□□ -0.64
XRCC1-208ENST00000598422 DYNC2LI1Q8TCX1 351 aa11.07□□□□□ -0.64
XRCC1-208ENST00000598422 C14orf166Q9Y224 244 aaKnown RBP11.07□□□□□ -0.64
XRCC1-208ENST00000598422 UFC1Q9Y3C8 167 aa11.07□□□□□ -0.64
XRCC1-208ENST00000598422 SORL1Q92673 2214 aa11.07□□□□□ -0.64
XRCC1-208ENST00000598422 IGHV3-21A0A0B4J1V1 117 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 IGHV3-35A0A0C4DH35 117 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 C3orf85A0A1B0GTC6 90 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 OR2T8A6NH00 312 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 EDN2P20800 178 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 Q56UQ5 140 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 ZNF57Q68EA5 555 aaPredicted RBP11.06□□□□□ -0.64
XRCC1-208ENST00000598422 FAAP20Q6NZ36 180 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 UXS1Q8NBZ7 420 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 OR1P1Q8NH06 330 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 MARC2Q969Z3 335 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 ISOC1Q96CN7 298 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 RRNAD1Q96FB5 475 aaKnown RBP11.06□□□□□ -0.64
XRCC1-208ENST00000598422 BSCL2Q96G97 398 aaPredicted RBP11.06□□□□□ -0.64
XRCC1-208ENST00000598422 TP53RKQ96S44 253 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 NEURL2Q9BR09 285 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 THAP7Q9BT49 309 aaPredicted RBP11.06□□□□□ -0.64
XRCC1-208ENST00000598422 PDCD10Q9BUL8 212 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 C19orf73Q9NVV2 129 aa11.06□□□□□ -0.64
XRCC1-208ENST00000598422 H3BMQ9 156 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 CTDSPLO15194 276 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 B3GALNT1O75752 331 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 CTSDP07339 412 aaPredicted RBP11.05□□□□□ -0.64
XRCC1-208ENST00000598422 AKAIN1P0CW23 69 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 MFAP2P55001 183 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 HSPE1P61604 102 aaKnown RBP11.05□□□□□ -0.64
XRCC1-208ENST00000598422 ERHP84090 104 aaKnown RBP11.05□□□□□ -0.64
XRCC1-208ENST00000598422 PRCDQ00LT1 54 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 TM4SF20Q53R12 229 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 SPSB3Q6PJ21 355 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 BTNL8Q6UX41 500 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 UNQ9165/PRO28630Q6UXU0 137 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 SLC16A13Q7RTY0 426 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 OR2C3Q8N628 320 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 SLC35G3Q8N808 338 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 MARCH1Q8TCQ1 289 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 SCARB1Q8WTV0 552 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 MISP3Q96FF7 219 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 ATP6V0BQ99437 205 aa11.05□□□□□ -0.64
XRCC1-208ENST00000598422 GAR1Q9NY12 217 aaKnown RBP11.05□□□□□ -0.64
XRCC1-208ENST00000598422 RSL24D1Q9UHA3 163 aaKnown RBP11.05□□□□□ -0.64
XRCC1-208ENST00000598422 TEX13DA0A0J9YY54 714 aaPredicted RBP11.04□□□□□ -0.64
XRCC1-208ENST00000598422 CCDC160A6NGH7 325 aa11.04□□□□□ -0.64
XRCC1-208ENST00000598422 K7EIM0 57 aa11.04□□□□□ -0.64
XRCC1-208ENST00000598422 IFNA17P01571 189 aa11.04□□□□□ -0.64
XRCC1-208ENST00000598422 IZUMO4Q1ZYL8 232 aa11.04□□□□□ -0.64
XRCC1-208ENST00000598422 SP6Q3SY56 376 aa11.04□□□□□ -0.64
XRCC1-208ENST00000598422 SPINK9Q5DT21 86 aa11.04□□□□□ -0.64
XRCC1-208ENST00000598422 MCFD2Q8NI22 146 aa11.04□□□□□ -0.64
XRCC1-208ENST00000598422 TMEM190Q8WZ59 177 aa11.04□□□□□ -0.64
XRCC1-208ENST00000598422 WDR89Q96FK6 387 aaPredicted RBP11.04□□□□□ -0.64
XRCC1-208ENST00000598422 PRRT1Q99946 306 aa11.04□□□□□ -0.64
XRCC1-208ENST00000598422 C20orf24Q9BUV8 137 aa11.04□□□□□ -0.64
XRCC1-208ENST00000598422 SELENOKQ9Y6D0 94 aa11.04□□□□□ -0.64
XRCC1-208ENST00000598422 ZNF785A8K8V0 405 aa11.03□□□□□ -0.64
XRCC1-208ENST00000598422 NUPL2O15504 423 aaKnown RBP11.03□□□□□ -0.64
XRCC1-208ENST00000598422 IGKV1-5P01602 117 aa11.03□□□□□ -0.64
XRCC1-208ENST00000598422 SNCAP37840 140 aa11.03□□□□□ -0.64
XRCC1-208ENST00000598422 HOXA1P49639 335 aaPredicted RBP11.03□□□□□ -0.64
XRCC1-208ENST00000598422 ELLP55199 621 aaPredicted RBP11.03□□□□□ -0.64
XRCC1-208ENST00000598422 SURF2Q15527 256 aaPredicted RBP11.03□□□□□ -0.64
XRCC1-208ENST00000598422 RBPMS2Q6ZRY4 209 aaKnown RBP11.03□□□□□ -0.64
XRCC1-208ENST00000598422 TMEM61Q8N0U2 210 aa11.03□□□□□ -0.64
XRCC1-208ENST00000598422 ZNF114Q8NC26 417 aa11.03□□□□□ -0.64
XRCC1-208ENST00000598422 OR4C16Q8NGL9 310 aa11.03□□□□□ -0.64
XRCC1-208ENST00000598422 PINX1Q96BK5 328 aaKnown RBP11.03□□□□□ -0.64
XRCC1-208ENST00000598422 SPATA25Q9BR10 227 aa11.03□□□□□ -0.64
XRCC1-208ENST00000598422 TM2D3Q9BRN9 247 aa11.03□□□□□ -0.64
XRCC1-208ENST00000598422 ZNF436Q9C0F3 470 aaPredicted RBP11.03□□□□□ -0.64
XRCC1-208ENST00000598422 SLIRPQ9GZT3 109 aaKnown RBP11.03□□□□□ -0.64
XRCC1-208ENST00000598422 ENY2Q9NPA8 101 aa11.03□□□□□ -0.64
XRCC1-208ENST00000598422 DAZ1Q9NQZ3 744 aaKnown RBP11.03□□□□□ -0.64
XRCC1-208ENST00000598422 MRPL27Q9P0M9 148 aaKnown RBP11.03□□□□□ -0.64
XRCC1-208ENST00000598422 MLXQ9UH92 298 aa11.03□□□□□ -0.64
XRCC1-208ENST00000598422 FABP12A6NFH5 140 aa11.02□□□□□ -0.65
XRCC1-208ENST00000598422 ST8SIA3O43173 380 aa11.02□□□□□ -0.65
XRCC1-208ENST00000598422 SCAF4O95104 1147 aaKnown RBP11.02□□□□□ -0.65
XRCC1-208ENST00000598422 CD7P09564 240 aa11.02□□□□□ -0.65
XRCC1-208ENST00000598422 OR5AC1P0C628 307 aa11.02□□□□□ -0.65
XRCC1-208ENST00000598422 UCP1P25874 307 aa11.02□□□□□ -0.65
XRCC1-208ENST00000598422 MFAP4P55083 255 aa11.02□□□□□ -0.65
XRCC1-208ENST00000598422 RELQ04864 619 aaPredicted RBP11.02□□□□□ -0.65
XRCC1-208ENST00000598422 HAGHQ16775 308 aa11.02□□□□□ -0.65
XRCC1-208ENST00000598422 ANKRD55Q3KP44 614 aa11.02□□□□□ -0.65
XRCC1-208ENST00000598422 OR52B4Q8NGK2 314 aa11.02□□□□□ -0.65
XRCC1-208ENST00000598422 NAA60Q9H7X0 242 aa11.02□□□□□ -0.65
XRCC1-208ENST00000598422 MCUBQ9NWR8 336 aa11.02□□□□□ -0.65
XRCC1-208ENST00000598422 SCP2D1Q9UJQ7 156 aa11.02□□□□□ -0.65
XRCC1-208ENST00000598422 A0A0B4J293 547 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms