RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 CTDSP2O14595 271 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 SPRY2O43597 315 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 CD3DP04234 171 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 CLEC3BP05452 202 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 TRAPPC2P0DI81 140 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 TRAPPC2BP0DI82 140 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 DEFA4P12838 97 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 APOC4P55056 127 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 ERVK-16P61578 105 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 PMS2P11Q13670 270 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 BTNL8Q6UX41 500 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 RBPMS2Q6ZRY4 209 aaKnown RBP9.31□□□□□ -0.92
TRIM28-212ENST00000597995 GPR141Q7Z602 305 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 LYG2Q86SG7 212 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 LHFPL1Q86WI0 220 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 SLC38A6Q8IZM9 456 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 OR4D10Q8NGI6 311 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 OR1L6Q8NGR2 347 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 OR1L8Q8NGR8 309 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 AP3S1Q92572 193 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 SEC22AQ96IW7 307 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 SPAG8Q99932 426 aaPredicted RBP9.31□□□□□ -0.92
TRIM28-212ENST00000597995 KRTAP17-1Q9BYP8 105 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 MTFP1Q9UDX5 166 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 KLK5Q9Y337 293 aaPredicted RBP9.31□□□□□ -0.92
TRIM28-212ENST00000597995 UFC1Q9Y3C8 167 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 SELENOKQ9Y6D0 94 aa9.31□□□□□ -0.92
TRIM28-212ENST00000597995 SERPINE2P07093 398 aa9.3□□□□□ -0.92
TRIM28-212ENST00000597995 OR13C7P0DN81 318 aa9.3□□□□□ -0.92
TRIM28-212ENST00000597995 LPCAT3Q6P1A2 487 aa9.3□□□□□ -0.92
TRIM28-212ENST00000597995 UNQ9165/PRO28630Q6UXU0 137 aa9.3□□□□□ -0.92
TRIM28-212ENST00000597995 OR2C3Q8N628 320 aa9.3□□□□□ -0.92
TRIM28-212ENST00000597995 GDPD1Q8N9F7 314 aa9.3□□□□□ -0.92
TRIM28-212ENST00000597995 ZNF502Q8TBZ5 544 aa9.3□□□□□ -0.92
TRIM28-212ENST00000597995 C5orf66Q9H5L9 145 aa9.3□□□□□ -0.92
TRIM28-212ENST00000597995 FAM212BQ9NTI7 297 aaPredicted RBP9.3□□□□□ -0.92
TRIM28-212ENST00000597995 TMEM14BQ9NUH8 114 aa9.3□□□□□ -0.92
TRIM28-212ENST00000597995 OR51B2Q9Y5P1 312 aa9.3□□□□□ -0.92
TRIM28-212ENST00000597995 KIR2DL5BA0A0G2JN68 375 aa9.29□□□□□ -0.92
TRIM28-212ENST00000597995 KIR2DL5BA0A0G2JPC4 375 aa9.29□□□□□ -0.92
TRIM28-212ENST00000597995 F8W735 103 aaPredicted RBP9.29□□□□□ -0.92
TRIM28-212ENST00000597995 PI3P19957 117 aa9.29□□□□□ -0.92
TRIM28-212ENST00000597995 PTBP1P26599 531 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRIM28-212ENST00000597995 EWSR1Q01844 656 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRIM28-212ENST00000597995 CLVS1Q8IUQ0 354 aaPredicted RBP9.29□□□□□ -0.92
TRIM28-212ENST00000597995 KIR2DL5AQ8N109 375 aa9.29□□□□□ -0.92
TRIM28-212ENST00000597995 TMEM217Q8N7C4 229 aa9.29□□□□□ -0.92
TRIM28-212ENST00000597995 KIR2DL5BQ8NHK3 375 aa9.29□□□□□ -0.92
TRIM28-212ENST00000597995 MRGPRFQ96AM1 343 aa9.29□□□□□ -0.92
TRIM28-212ENST00000597995 ZNF414Q96IQ9 312 aa9.29□□□□□ -0.92
TRIM28-212ENST00000597995 HINT2Q9BX68 163 aa9.29□□□□□ -0.92
TRIM28-212ENST00000597995 ZNF436Q9C0F3 470 aaPredicted RBP9.29□□□□□ -0.92
TRIM28-212ENST00000597995 THYN1Q9P016 225 aa9.29□□□□□ -0.92
TRIM28-212ENST00000597995 F11RQ9Y624 299 aaKnown RBP9.29□□□□□ -0.92
TRIM28-212ENST00000597995 FRAS1Q86XX4 4008 aa9.28□□□□□ -0.92
TRIM28-212ENST00000597995 IGHV3-21A0A0B4J1V1 117 aa9.28□□□□□ -0.92
TRIM28-212ENST00000597995 IGHV3-35A0A0C4DH35 117 aa9.28□□□□□ -0.92
TRIM28-212ENST00000597995 C15orf61A6NNL5 157 aa9.28□□□□□ -0.92
TRIM28-212ENST00000597995 TSPAN4O14817 238 aa9.28□□□□□ -0.92
TRIM28-212ENST00000597995 CD74P04233 296 aa9.28□□□□□ -0.92
TRIM28-212ENST00000597995 GPR183P32249 361 aa9.28□□□□□ -0.92
TRIM28-212ENST00000597995 RND3P61587 244 aa9.28□□□□□ -0.92
TRIM28-212ENST00000597995 IZUMO4Q1ZYL8 232 aa9.28□□□□□ -0.92
TRIM28-212ENST00000597995 RNASE10Q5GAN6 216 aaKnown RBP9.28□□□□□ -0.92
TRIM28-212ENST00000597995 THOC7Q6I9Y2 204 aaKnown RBP9.28□□□□□ -0.92
TRIM28-212ENST00000597995 PLET1Q6UQ28 207 aa9.28□□□□□ -0.92
TRIM28-212ENST00000597995 STPG3Q8N7X2 389 aa9.28□□□□□ -0.92
TRIM28-212ENST00000597995 DYNC2LI1Q8TCX1 351 aa9.28□□□□□ -0.92
TRIM28-212ENST00000597995 LSM10Q969L4 123 aaKnown RBP9.28□□□□□ -0.92
TRIM28-212ENST00000597995 RNF183Q96D59 192 aa9.28□□□□□ -0.92
TRIM28-212ENST00000597995 TP53RKQ96S44 253 aa9.28□□□□□ -0.92
TRIM28-212ENST00000597995 K7EIM0 57 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 SNAPC5O75971 98 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 IGKV1-5P01602 117 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 P0C879 139 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 TBPP20226 339 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 PIGPP57054 158 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 DEFB135Q30KP9 77 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 LAMTOR1Q6IAA8 161 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 SLC25A24Q6NUK1 477 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 HSD17B13Q7Z5P4 300 aaPredicted RBP9.27□□□□□ -0.93
TRIM28-212ENST00000597995 ARRDC1Q8N5I2 433 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 TMEM229BQ8NBD8 167 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 OR5B3Q8NH48 314 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 VN1R17PQ8TDU5 208 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 PRNDQ9UKY0 176 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 KMT2AQ03164 3969 aa9.27□□□□□ -0.93
TRIM28-212ENST00000597995 GABARAPH6UMI1 98 aa9.26□□□□□ -0.93
TRIM28-212ENST00000597995 RGS5O15539 181 aa9.26□□□□□ -0.93
TRIM28-212ENST00000597995 CYB5BO43169 146 aa9.26□□□□□ -0.93
TRIM28-212ENST00000597995 TGOLN2O43493 480 aa9.26□□□□□ -0.93
TRIM28-212ENST00000597995 PGAM2P15259 253 aa9.26□□□□□ -0.93
TRIM28-212ENST00000597995 ADMP35318 185 aa9.26□□□□□ -0.93
TRIM28-212ENST00000597995 PPP5CP53041 499 aa9.26□□□□□ -0.93
TRIM28-212ENST00000597995 LGALS9CQ6DKI2 356 aa9.26□□□□□ -0.93
TRIM28-212ENST00000597995 FAAP20Q6NZ36 180 aa9.26□□□□□ -0.93
TRIM28-212ENST00000597995 TERB2Q8NHR7 220 aa9.26□□□□□ -0.93
TRIM28-212ENST00000597995 SCARB1Q8WTV0 552 aa9.26□□□□□ -0.93
TRIM28-212ENST00000597995 RAB2BQ8WUD1 216 aa9.26□□□□□ -0.93
TRIM28-212ENST00000597995 TMEM190Q8WZ59 177 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms