RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 C15orf62A8K5M9 175 aa11.58□□□□□ -0.56
VRK3-212ENST00000596814 ATP6V0E1O15342 81 aa11.58□□□□□ -0.56
VRK3-212ENST00000596814 AREGP15514 252 aa11.58□□□□□ -0.56
VRK3-212ENST00000596814 NPY1RP25929 384 aa11.58□□□□□ -0.56
VRK3-212ENST00000596814 SNCAP37840 140 aa11.58□□□□□ -0.56
VRK3-212ENST00000596814 HTR2BP41595 481 aa11.58□□□□□ -0.56
VRK3-212ENST00000596814 LGALSLQ3ZCW2 172 aaPredicted RBP11.58□□□□□ -0.56
VRK3-212ENST00000596814 TMEM14EPQ6UXP3 125 aa11.58□□□□□ -0.56
VRK3-212ENST00000596814 ZNF418Q8TF45 676 aaPredicted RBP11.58□□□□□ -0.56
VRK3-212ENST00000596814 FBXO7Q9Y3I1 522 aa11.58□□□□□ -0.56
VRK3-212ENST00000596814 HSPB11Q9Y547 144 aa11.58□□□□□ -0.56
VRK3-212ENST00000596814 REG1AP05451 166 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 OR8U8P0C7N1 319 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 METTL15P1P0C7V9 234 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 BLCAPP62952 87 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 BAXQ07812 192 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 BSXQ3C1V8 233 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 LAMTOR1Q6IAA8 161 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 KCNRGQ8N5I3 272 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 SGMS2Q8NHU3 365 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 A0A0D9SG52 128 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 CST7O76096 145 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 IGHG2P01859 326 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 RNASE2P10153 161 aaKnown RBP11.57□□□□□ -0.56
VRK3-212ENST00000596814 EGR2P11161 476 aaPredicted RBP11.57□□□□□ -0.56
VRK3-212ENST00000596814 SULT1A1P50225 295 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 RAB11AP62491 216 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 SLC35E3Q7Z769 313 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 NPFFR1Q9GZQ6 430 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 ESM1Q9NQ30 184 aa11.57□□□□□ -0.56
VRK3-212ENST00000596814 FAM157CP0CG43 387 aa11.56□□□□□ -0.56
VRK3-212ENST00000596814 SUB1P53999 127 aaKnown RBP eCLIP11.56□□□□□ -0.56
VRK3-212ENST00000596814 ATP5IP56385 69 aaPredicted RBP11.56□□□□□ -0.56
VRK3-212ENST00000596814 NHLH2Q02577 135 aa11.56□□□□□ -0.56
VRK3-212ENST00000596814 C2orf83Q53S99 150 aa11.56□□□□□ -0.56
VRK3-212ENST00000596814 ASPHD1Q5U4P2 390 aa11.56□□□□□ -0.56
VRK3-212ENST00000596814 TMUB2Q71RG4 321 aa11.56□□□□□ -0.56
VRK3-212ENST00000596814 ZNF114Q8NC26 417 aa11.56□□□□□ -0.56
VRK3-212ENST00000596814 LFNGQ8NES3 379 aa11.56□□□□□ -0.56
VRK3-212ENST00000596814 TMEM170AQ8WVE7 144 aa11.56□□□□□ -0.56
VRK3-212ENST00000596814 P2RX4Q99571 388 aa11.56□□□□□ -0.56
VRK3-212ENST00000596814 ARL6Q9H0F7 186 aa11.56□□□□□ -0.56
VRK3-212ENST00000596814 LINC01548A6NM66 108 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 CLDN34H7C241 214 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 SCAF4O95104 1147 aaKnown RBP11.55□□□□□ -0.56
VRK3-212ENST00000596814 S100A11P31949 105 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 ECSCRQ19T08 205 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 OR8G2PQ6IF36 304 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 TMEM217Q8N7C4 229 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 FBXL17Q9UF56 701 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 FN1P02751 2386 aaKnown RBP11.55□□□□□ -0.56
VRK3-212ENST00000596814 PMS2P5A8MQ11 134 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 NPIPB5A8MRT5 1133 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 TRIM77I1YAP6 450 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 CRLF1O75462 422 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 IFNA4P05014 189 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 CTRB1P17538 263 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 C4BPBP20851 252 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 CRIP2P52943 208 aaPredicted RBP11.55□□□□□ -0.56
VRK3-212ENST00000596814 HILS1P60008 231 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 HBG1P69891 147 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 HBG2P69892 147 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 CTRB2Q6GPI1 263 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 UNQ5815/PRO19632Q6UWF5 114 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 ETV3LQ6ZN32 361 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 Q6ZS46 218 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 HAPLN4Q86UW8 402 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 STPG2Q8N412 459 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 BSCL2Q96G97 398 aaPredicted RBP11.55□□□□□ -0.56
VRK3-212ENST00000596814 TMEM68Q96MH6 324 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 SMIM3Q9BZL3 60 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 PRSS22Q9GZN4 317 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 BOLA1Q9Y3E2 137 aa11.55□□□□□ -0.56
VRK3-212ENST00000596814 F11RQ9Y624 299 aaKnown RBP11.55□□□□□ -0.56
VRK3-212ENST00000596814 KANTRA0A1W2PQU2 76 aa11.54□□□□□ -0.56
VRK3-212ENST00000596814 BCL2L11O43521 198 aa11.54□□□□□ -0.56
VRK3-212ENST00000596814 FBXO24O75426 580 aa11.54□□□□□ -0.56
VRK3-212ENST00000596814 IGF1P05019 195 aa11.54□□□□□ -0.56
VRK3-212ENST00000596814 CRYGCP07315 174 aa11.54□□□□□ -0.56
VRK3-212ENST00000596814 ARL16Q0P5N6 197 aa11.54□□□□□ -0.56
VRK3-212ENST00000596814 C19orf35Q6ZS72 473 aa11.54□□□□□ -0.56
VRK3-212ENST00000596814 TTC9CQ8N5M4 171 aa11.54□□□□□ -0.56
VRK3-212ENST00000596814 OR10P1Q8NGE3 313 aa11.54□□□□□ -0.56
VRK3-212ENST00000596814 OR1S2Q8NGQ3 325 aa11.54□□□□□ -0.56
VRK3-212ENST00000596814 OR5C1Q8NGR4 320 aa11.54□□□□□ -0.56
VRK3-212ENST00000596814 OR1P1Q8NH06 330 aa11.54□□□□□ -0.56
VRK3-212ENST00000596814 JMJD8Q96S16 334 aa11.54□□□□□ -0.56
VRK3-212ENST00000596814 ARPC5LQ9BPX5 153 aa11.54□□□□□ -0.56
VRK3-212ENST00000596814 AP4M1O00189 453 aa11.53□□□□□ -0.56
VRK3-212ENST00000596814 DEFA4P12838 97 aa11.53□□□□□ -0.56
VRK3-212ENST00000596814 SLC38A11Q08AI6 406 aa11.53□□□□□ -0.56
VRK3-212ENST00000596814 CLINT1Q14677 625 aa11.53□□□□□ -0.56
VRK3-212ENST00000596814 AKIRIN2Q53H80 203 aa11.53□□□□□ -0.56
VRK3-212ENST00000596814 LILRB2Q8N423 598 aa11.53□□□□□ -0.56
VRK3-212ENST00000596814 PINX1Q96BK5 328 aaKnown RBP11.53□□□□□ -0.56
VRK3-212ENST00000596814 WNT10AQ9GZT5 417 aa11.53□□□□□ -0.56
VRK3-212ENST00000596814 ZNF702PQ9H963 129 aa11.53□□□□□ -0.56
VRK3-212ENST00000596814 TRAV41A0A0B4J266 112 aa11.52□□□□□ -0.56
VRK3-212ENST00000596814 G3V318 75 aa11.52□□□□□ -0.56
VRK3-212ENST00000596814 RNASE1P07998 156 aaKnown RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms