RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 RPP25LQ8N5L8 163 aaKnown RBP11.75□□□□□ -0.53
LINC02560-201ENST00000596379 TMEM217Q8N7C4 229 aa11.75□□□□□ -0.53
LINC02560-201ENST00000596379 DGCR14Q96DF8 476 aaKnown RBP11.75□□□□□ -0.53
LINC02560-201ENST00000596379 ZNF2Q9BSG1 426 aaPredicted RBP11.75□□□□□ -0.53
LINC02560-201ENST00000596379 IFT46Q9NQC8 304 aa11.75□□□□□ -0.53
LINC02560-201ENST00000596379 SMPXQ9UHP9 88 aa11.75□□□□□ -0.53
LINC02560-201ENST00000596379 KMT2AQ03164 3969 aa11.75□□□□□ -0.53
LINC02560-201ENST00000596379 C15orf62A8K5M9 175 aa11.74□□□□□ -0.53
LINC02560-201ENST00000596379 XRCC3O43542 346 aa11.74□□□□□ -0.53
LINC02560-201ENST00000596379 PMP2P02689 132 aa11.74□□□□□ -0.53
LINC02560-201ENST00000596379 CTSGP08311 255 aa11.74□□□□□ -0.53
LINC02560-201ENST00000596379 ZNF124Q15973 351 aa11.74□□□□□ -0.53
LINC02560-201ENST00000596379 PHLDA1Q8WV24 401 aaPredicted RBP11.74□□□□□ -0.53
LINC02560-201ENST00000596379 MOB3AQ96BX8 217 aa11.74□□□□□ -0.53
LINC02560-201ENST00000596379 S100A16Q96FQ6 103 aaKnown RBP11.74□□□□□ -0.53
LINC02560-201ENST00000596379 ZNF414Q96IQ9 312 aa11.74□□□□□ -0.53
LINC02560-201ENST00000596379 RNF2Q99496 336 aa11.74□□□□□ -0.53
LINC02560-201ENST00000596379 YTHDF1Q9BYJ9 559 aaKnown RBP11.74□□□□□ -0.53
LINC02560-201ENST00000596379 IGHV7-4-1A0A0J9YVY3 117 aa11.73□□□□□ -0.53
LINC02560-201ENST00000596379 CHEK1O14757 476 aa11.73□□□□□ -0.53
LINC02560-201ENST00000596379 TFPI2P48307 235 aa11.73□□□□□ -0.53
LINC02560-201ENST00000596379 CADM3Q8N126 398 aa11.73□□□□□ -0.53
LINC02560-201ENST00000596379 TMEM116Q8NCL8 245 aa11.73□□□□□ -0.53
LINC02560-201ENST00000596379 TSPAN14Q8NG11 270 aa11.73□□□□□ -0.53
LINC02560-201ENST00000596379 TMEM56Q96MV1 263 aa11.73□□□□□ -0.53
LINC02560-201ENST00000596379 RHPN1-AS1Q9BWJ2 59 aa11.73□□□□□ -0.53
LINC02560-201ENST00000596379 C6orf62Q9GZU0 229 aaPredicted RBP11.73□□□□□ -0.53
LINC02560-201ENST00000596379 CSTL1Q9H114 145 aa11.73□□□□□ -0.53
LINC02560-201ENST00000596379 PRNDQ9UKY0 176 aa11.73□□□□□ -0.53
LINC02560-201ENST00000596379 IGHV3-49A0A0A0MS15 119 aa11.72□□□□□ -0.53
LINC02560-201ENST00000596379 DBX1A6NMT0 343 aa11.72□□□□□ -0.53
LINC02560-201ENST00000596379 CMTM1Q8IZ96 169 aa11.72□□□□□ -0.53
LINC02560-201ENST00000596379 OR1P1Q8NH06 330 aa11.72□□□□□ -0.53
LINC02560-201ENST00000596379 FKBP11Q9NYL4 201 aa11.72□□□□□ -0.53
LINC02560-201ENST00000596379 IGKV3-7A0A075B6H7 116 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 MPTX1A8MV57 137 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 GPR31O00270 319 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 NUPL2O15504 423 aaKnown RBP11.71□□□□□ -0.53
LINC02560-201ENST00000596379 TMEM127O75204 238 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 DEDDO75618 318 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 YIF1AO95070 293 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 CMC4P56277 68 aaPredicted RBP11.71□□□□□ -0.53
LINC02560-201ENST00000596379 RELQ04864 619 aaPredicted RBP11.71□□□□□ -0.53
LINC02560-201ENST00000596379 OR5H2Q8NGV7 314 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 OR6F1Q8NGZ6 308 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 SLC25A46Q96AG3 418 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 RARRES2Q99969 163 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 KRTAP17-1Q9BYP8 105 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 FXYD6Q9H0Q3 95 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 Q9H521 79 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 TMEM14BQ9NUH8 114 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 ANAPC10Q9UM13 185 aa11.71□□□□□ -0.53
LINC02560-201ENST00000596379 IGHV3OR16-13A0A075B7E8 117 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 TRAV14DV4A0A0A6YYC5 116 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 IGHV3-74A0A0B4J1X5 117 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 I3L2K1 104 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 NAT1P18440 290 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 MFAP4P55083 255 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 TAS2R46P59540 309 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 NEDD8Q15843 81 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 TMEM69Q5SWH9 247 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 LGALS9CQ6DKI2 356 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 LYSMD2Q8IV50 215 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 GBGT1Q8N5D6 347 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 MISP3Q96FF7 219 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 OR10C1Q96KK4 312 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 TSC22D3Q99576 134 aa11.7□□□□□ -0.54
LINC02560-201ENST00000596379 C15orf61A6NNL5 157 aa11.69□□□□□ -0.54
LINC02560-201ENST00000596379 IGHV3-48P01763 117 aa11.69□□□□□ -0.54
LINC02560-201ENST00000596379 TGFBR1P36897 503 aa11.69□□□□□ -0.54
LINC02560-201ENST00000596379 TAS2R20P59543 309 aa11.69□□□□□ -0.54
LINC02560-201ENST00000596379 NANOS2P60321 138 aaKnown RBP11.69□□□□□ -0.54
LINC02560-201ENST00000596379 PHLDA2Q53GA4 152 aa11.69□□□□□ -0.54
LINC02560-201ENST00000596379 UBE2NLQ5JXB2 153 aa11.69□□□□□ -0.54
LINC02560-201ENST00000596379 FAM90A2PQ658T7 463 aa11.69□□□□□ -0.54
LINC02560-201ENST00000596379 GATAD1Q8WUU5 269 aa11.69□□□□□ -0.54
LINC02560-201ENST00000596379 CMTM3Q96MX0 182 aa11.69□□□□□ -0.54
LINC02560-201ENST00000596379 TXN2Q99757 166 aa11.69□□□□□ -0.54
LINC02560-201ENST00000596379 NXF2Q9GZY0 626 aaKnown RBP11.69□□□□□ -0.54
LINC02560-201ENST00000596379 ATP6V1G2O95670 118 aa11.68□□□□□ -0.54
LINC02560-201ENST00000596379 MT-CO2P00403 227 aa11.68□□□□□ -0.54
LINC02560-201ENST00000596379 HLA-DMAP28067 261 aa11.68□□□□□ -0.54
LINC02560-201ENST00000596379 PRSS3P35030 304 aa11.68□□□□□ -0.54
LINC02560-201ENST00000596379 CROCCP3Q8IVE0 287 aa11.68□□□□□ -0.54
LINC02560-201ENST00000596379 SAMD12Q8N8I0 201 aa11.68□□□□□ -0.54
LINC02560-201ENST00000596379 OR11H2Q8NH07 326 aa11.68□□□□□ -0.54
LINC02560-201ENST00000596379 OR4A16Q8NH70 328 aa11.68□□□□□ -0.54
LINC02560-201ENST00000596379 C11orf45Q8TAV5 145 aa11.68□□□□□ -0.54
LINC02560-201ENST00000596379 FBXL17Q9UF56 701 aa11.68□□□□□ -0.54
LINC02560-201ENST00000596379 DNAH10Q8IVF4 4471 aa11.67□□□□□ -0.54
LINC02560-201ENST00000596379 HRH1P35367 487 aa11.67□□□□□ -0.54
LINC02560-201ENST00000596379 RPS19P39019 145 aaKnown RBP11.67□□□□□ -0.54
LINC02560-201ENST00000596379 TCF24Q7RTU0 167 aa11.67□□□□□ -0.54
LINC02560-201ENST00000596379 H2BFWTQ7Z2G1 175 aa11.67□□□□□ -0.54
LINC02560-201ENST00000596379 TBC1D26Q86UD7 250 aa11.67□□□□□ -0.54
LINC02560-201ENST00000596379 PINX1Q96BK5 328 aaKnown RBP11.67□□□□□ -0.54
LINC02560-201ENST00000596379 SEC22AQ96IW7 307 aa11.67□□□□□ -0.54
LINC02560-201ENST00000596379 GNG7O60262 68 aa11.66□□□□□ -0.54
LINC02560-201ENST00000596379 IGKV1-39P01597 117 aa11.66□□□□□ -0.54
LINC02560-201ENST00000596379 IGKV1D-39P04432 117 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms