RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 PRAMEF5Q5TYX0 476 aa10.15□□□□□ -0.78
SCAF1-202ENST00000595242 TMEM200BQ69YZ2 307 aa10.15□□□□□ -0.78
SCAF1-202ENST00000595242 HCP5Q6MZN7 132 aa10.15□□□□□ -0.78
SCAF1-202ENST00000595242 BTNL8Q6UX41 500 aa10.15□□□□□ -0.78
SCAF1-202ENST00000595242 TMEM14EPQ6UXP3 125 aa10.15□□□□□ -0.78
SCAF1-202ENST00000595242 H2BFWTQ7Z2G1 175 aa10.15□□□□□ -0.78
SCAF1-202ENST00000595242 OR5C1Q8NGR4 320 aa10.15□□□□□ -0.78
SCAF1-202ENST00000595242 OR4S2Q8NH73 311 aa10.15□□□□□ -0.78
SCAF1-202ENST00000595242 H1FXQ92522 213 aaKnown RBP10.15□□□□□ -0.78
SCAF1-202ENST00000595242 MARC2Q969Z3 335 aa10.15□□□□□ -0.78
SCAF1-202ENST00000595242 S1PR3Q99500 378 aa10.15□□□□□ -0.78
SCAF1-202ENST00000595242 PRSS22Q9GZN4 317 aa10.15□□□□□ -0.78
SCAF1-202ENST00000595242 RBKSQ9H477 322 aa10.15□□□□□ -0.78
SCAF1-202ENST00000595242 PSENENQ9NZ42 101 aa10.15□□□□□ -0.78
SCAF1-202ENST00000595242 STRAPQ9Y3F4 350 aaKnown RBP10.15□□□□□ -0.78
SCAF1-202ENST00000595242 TCRBV4S1A1TA0A5B7 111 aa10.14□□□□□ -0.79
SCAF1-202ENST00000595242 ZNF705EA8MWA4 302 aaPredicted RBP10.14□□□□□ -0.79
SCAF1-202ENST00000595242 FCGR3BO75015 233 aa10.14□□□□□ -0.79
SCAF1-202ENST00000595242 NXPH3O95157 252 aa10.14□□□□□ -0.79
SCAF1-202ENST00000595242 NQO2P16083 231 aa10.14□□□□□ -0.79
SCAF1-202ENST00000595242 TMEM95Q3KNT9 176 aa10.14□□□□□ -0.79
SCAF1-202ENST00000595242 PXDC1Q5TGL8 231 aa10.14□□□□□ -0.79
SCAF1-202ENST00000595242 Q6ZS46 218 aa10.14□□□□□ -0.79
SCAF1-202ENST00000595242 ZNF833PQ6ZTB9 187 aa10.14□□□□□ -0.79
SCAF1-202ENST00000595242 CCDC28AQ8IWP9 274 aa10.14□□□□□ -0.79
SCAF1-202ENST00000595242 LINC00482Q8N8I6 264 aa10.14□□□□□ -0.79
SCAF1-202ENST00000595242 OR52E5Q8NH55 327 aa10.14□□□□□ -0.79
SCAF1-202ENST00000595242 GNPNAT1Q96EK6 184 aaPredicted RBP10.14□□□□□ -0.79
SCAF1-202ENST00000595242 CIB3Q96Q77 187 aaPredicted RBP10.14□□□□□ -0.79
SCAF1-202ENST00000595242 HIPK2Q9H2X6 1198 aa10.14□□□□□ -0.79
SCAF1-202ENST00000595242 LSM4Q9Y4Z0 139 aaKnown RBP10.14□□□□□ -0.79
SCAF1-202ENST00000595242 TSSC4Q9Y5U2 329 aaPredicted RBP10.14□□□□□ -0.79
SCAF1-202ENST00000595242 UMAD1C9J7I0 102 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 TEX46H3BTG2 121 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 M0R1W7 72 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 OR8U8P0C7N1 319 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 IAPPP10997 89 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 NFYBP25208 207 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 VDAC2P45880 294 aaPredicted RBP10.13□□□□□ -0.79
SCAF1-202ENST00000595242 ZNF137PP52743 207 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 F2RL1P55085 397 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 LINC00205P59089 165 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 TAGLNQ01995 201 aaKnown RBP10.13□□□□□ -0.79
SCAF1-202ENST00000595242 PJVKQ0ZLH3 352 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 TCTEX1D4Q5JR98 221 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 HAPLN4Q86UW8 402 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 ZNF383Q8NA42 475 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 LEAP2Q969E1 77 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 LINC00052Q96N35 136 aa10.13□□□□□ -0.79
SCAF1-202ENST00000595242 CST7O76096 145 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 RBP4P02753 201 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 IL6RP08887 468 aaPredicted RBP10.12□□□□□ -0.79
SCAF1-202ENST00000595242 OR9G9P0C7N8 305 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 CCL3L1P16619 93 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 ATP6V0CP27449 155 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 RAB13P51153 203 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 ERVK-16P61578 105 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 BLCAPP62952 87 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 HBG1P69891 147 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 HBG2P69892 147 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 CLINT1Q14677 625 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 Q6ZRG5 221 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 ZNF429Q86V71 674 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 TMEM219Q86XT9 240 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 PUSL1Q8N0Z8 303 aaKnown RBP10.12□□□□□ -0.79
SCAF1-202ENST00000595242 COMMD1Q8N668 190 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 HSD17B11Q8NBQ5 300 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 DTD1Q8TEA8 209 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 ZMAT5Q9UDW3 170 aaKnown RBP10.12□□□□□ -0.79
SCAF1-202ENST00000595242 TCF19Q9Y242 345 aa10.12□□□□□ -0.79
SCAF1-202ENST00000595242 A0A1W2PPE3 182 aa10.11□□□□□ -0.79
SCAF1-202ENST00000595242 PMS2P5A8MQ11 134 aa10.11□□□□□ -0.79
SCAF1-202ENST00000595242 H3BP45 60 aa10.11□□□□□ -0.79
SCAF1-202ENST00000595242 IGHV3-7P01780 117 aa10.11□□□□□ -0.79
SCAF1-202ENST00000595242 ARG1P05089 322 aa10.11□□□□□ -0.79
SCAF1-202ENST00000595242 GNG10P50151 68 aa10.11□□□□□ -0.79
SCAF1-202ENST00000595242 ARL16Q0P5N6 197 aa10.11□□□□□ -0.79
SCAF1-202ENST00000595242 TMEM267Q0VDI3 215 aaPredicted RBP10.11□□□□□ -0.79
SCAF1-202ENST00000595242 ATP6V1FQ16864 119 aa10.11□□□□□ -0.79
SCAF1-202ENST00000595242 DPPA3Q6W0C5 159 aa10.11□□□□□ -0.79
SCAF1-202ENST00000595242 CENPVQ7Z7K6 275 aaPredicted RBP10.11□□□□□ -0.79
SCAF1-202ENST00000595242 MRPL41Q8IXM3 137 aaKnown RBP10.11□□□□□ -0.79
SCAF1-202ENST00000595242 C11orf42Q8N5U0 333 aa10.11□□□□□ -0.79
SCAF1-202ENST00000595242 OR4C12Q96R67 309 aa10.11□□□□□ -0.79
SCAF1-202ENST00000595242 PSMG3Q9BT73 122 aaPredicted RBP10.11□□□□□ -0.79
SCAF1-202ENST00000595242 MCRIP2Q9BUT9 160 aaKnown RBP10.11□□□□□ -0.79
SCAF1-202ENST00000595242 SH3BGRL3Q9H299 93 aa10.11□□□□□ -0.79
SCAF1-202ENST00000595242 TMEM140Q9NV12 185 aa10.11□□□□□ -0.79
SCAF1-202ENST00000595242 A6NDX4 124 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 C15orf61A6NNL5 157 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 J3QR06 171 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 HRASP01112 189 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 IFNA5P01569 189 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 METTL15P1P0C7V9 234 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 CT45A6P0DMU7 189 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 CT45A5P0DMU8 189 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 CT45A7P0DMV0 189 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 SPCS3P61009 180 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 VWC2Q2TAL6 325 aa10.1□□□□□ -0.79
SCAF1-202ENST00000595242 TMEM217Q8N7C4 229 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms