RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
VRK3-209ENST00000594948 MRPL27Q9P0M9 148 aaKnown RBP10.84□□□□□ -0.67
VRK3-209ENST00000594948 DKK4Q9UBT3 224 aa10.84□□□□□ -0.67
VRK3-209ENST00000594948 IZUMO1RA6ND01 250 aa10.84□□□□□ -0.67
VRK3-209ENST00000594948 DIRC3C9JPN6 131 aa10.84□□□□□ -0.67
VRK3-209ENST00000594948 CD33P20138 364 aa10.84□□□□□ -0.67
VRK3-209ENST00000594948 LPAL2Q16609 132 aa10.84□□□□□ -0.67
VRK3-209ENST00000594948 C3orf36Q3SXR2 165 aa10.84□□□□□ -0.67
VRK3-209ENST00000594948 SARAFQ96BY9 339 aa10.84□□□□□ -0.67
VRK3-209ENST00000594948 ARRDC1-AS1Q9H2J1 176 aa10.84□□□□□ -0.67
VRK3-209ENST00000594948 LPAR2Q9HBW0 351 aa10.84□□□□□ -0.67
VRK3-209ENST00000594948 ZNF71Q9NQZ8 489 aaPredicted RBP10.84□□□□□ -0.67
VRK3-209ENST00000594948 TBL2Q9Y4P3 447 aaKnown RBP10.84□□□□□ -0.67
VRK3-209ENST00000594948 HEATR1Q9H583 2144 aaKnown RBP10.83□□□□□ -0.68
VRK3-209ENST00000594948 A0A1W2PS18 150 aa10.83□□□□□ -0.68
VRK3-209ENST00000594948 LNP1A1A4G5 178 aa10.83□□□□□ -0.68
VRK3-209ENST00000594948 GGTLC3B5MD39 225 aa10.83□□□□□ -0.68
VRK3-209ENST00000594948 ZNF324O75467 553 aaPredicted RBP10.83□□□□□ -0.68
VRK3-209ENST00000594948 FRMD6-AS1P0C7T7 363 aa10.83□□□□□ -0.68
VRK3-209ENST00000594948 C8orf88P0DMB2 117 aa10.83□□□□□ -0.68
VRK3-209ENST00000594948 GATA4P43694 442 aa10.83□□□□□ -0.68
VRK3-209ENST00000594948 COL5A1-AS1Q5SY13 56 aa10.83□□□□□ -0.68
VRK3-209ENST00000594948 IBA57Q5T440 356 aaKnown RBP10.83□□□□□ -0.68
VRK3-209ENST00000594948 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
VRK3-209ENST00000594948 BHLHA15Q7RTS1 189 aaPredicted RBP10.83□□□□□ -0.68
VRK3-209ENST00000594948 DOLPP1Q86YN1 238 aa10.83□□□□□ -0.68
VRK3-209ENST00000594948 ZNRF1Q8ND25 227 aa10.83□□□□□ -0.68
VRK3-209ENST00000594948 OR5B3Q8NH48 314 aa10.83□□□□□ -0.68
VRK3-209ENST00000594948 BET1LQ9NYM9 111 aa10.83□□□□□ -0.68
VRK3-209ENST00000594948 SLC25A15Q9Y619 301 aa10.83□□□□□ -0.68
VRK3-209ENST00000594948 RAI1Q7Z5J4 1906 aaPredicted RBP10.83□□□□□ -0.68
VRK3-209ENST00000594948 IGHV3OR15-7A0A075B7D8 119 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 INS-IGF2F8WCM5 200 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 BMPR1BO00238 502 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 ACTL6BO94805 426 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 AMTP48728 403 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 PRRX1P54821 245 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 KRTDAPP60985 99 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 CACNG8Q8WXS5 425 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 ZNF714Q96N38 554 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 SLC25A33Q9BSK2 321 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 RNASE7Q9H1E1 156 aaKnown RBP10.82□□□□□ -0.68
VRK3-209ENST00000594948 UQCR10Q9UDW1 63 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 CDC42EP3Q9UKI2 254 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 PROCRQ9UNN8 238 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 DSCAMO60469 2012 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 PRUNE2Q8WUY3 3088 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 AHCTF1Q8WYP5 2266 aa10.82□□□□□ -0.68
VRK3-209ENST00000594948 TM4SF5O14894 197 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 OR7C2O60412 319 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 SUMO1P63165 101 aaKnown RBP10.81□□□□□ -0.68
VRK3-209ENST00000594948 CD69Q07108 199 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 IGFL2Q6UWQ7 119 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 MOGAT3Q86VF5 341 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 LYG1Q8N1E2 194 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 LOXL4Q96JB6 756 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 OR2V2Q96R30 315 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 CHRDL1Q9BU40 450 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 RNF114Q9Y508 228 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 TECTAO75443 2155 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 IGKV1OR2-108A0A075B7D4 117 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 TEX50A0A1B0GTY4 177 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 AHRRA9YTQ3 701 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 RNASE2P10153 161 aaKnown RBP10.81□□□□□ -0.68
VRK3-209ENST00000594948 GLRXP35754 106 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 ZNF83P51522 516 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 SPATA45Q537H7 98 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 ATP1A1-AS1Q5TC04 95 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 KLHDC1Q8N7A1 406 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 MBD6Q96DN6 1003 aa10.81□□□□□ -0.68
VRK3-209ENST00000594948 WDFY3Q8IZQ1 3526 aa10.8□□□□□ -0.68
VRK3-209ENST00000594948 FAM186AA6NE01 2351 aa10.8□□□□□ -0.68
VRK3-209ENST00000594948 PSMB11A5LHX3 300 aa10.8□□□□□ -0.68
VRK3-209ENST00000594948 DLL1O00548 723 aa10.8□□□□□ -0.68
VRK3-209ENST00000594948 IGHV3-7P01780 117 aa10.8□□□□□ -0.68
VRK3-209ENST00000594948 APCSP02743 223 aa10.8□□□□□ -0.68
VRK3-209ENST00000594948 SRIP30626 198 aa10.8□□□□□ -0.68
VRK3-209ENST00000594948 KLF3P57682 345 aaPredicted RBP10.8□□□□□ -0.68
VRK3-209ENST00000594948 RELQ04864 619 aaPredicted RBP10.8□□□□□ -0.68
VRK3-209ENST00000594948 MSMPQ1L6U9 139 aa10.8□□□□□ -0.68
VRK3-209ENST00000594948 STUMQ69YW2 141 aa10.8□□□□□ -0.68
VRK3-209ENST00000594948 SLC25A48Q6ZT89 311 aaKnown RBP10.8□□□□□ -0.68
VRK3-209ENST00000594948 NIT1Q86X76 327 aa10.8□□□□□ -0.68
VRK3-209ENST00000594948 HINT2Q9BX68 163 aa10.8□□□□□ -0.68
VRK3-209ENST00000594948 ZNF331Q9NQX6 463 aaPredicted RBP10.8□□□□□ -0.68
VRK3-209ENST00000594948 SLC35D1Q9NTN3 355 aa10.8□□□□□ -0.68
VRK3-209ENST00000594948 IGLV3-9A0A075B6K5 115 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 FXYD3Q14802 87 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 PMCHL1Q16048 86 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 PLA2G2CQ5R387 149 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 UTF1Q5T230 341 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 HES3Q5TGS1 186 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 OSR1Q8TAX0 266 aaPredicted RBP10.79□□□□□ -0.68
VRK3-209ENST00000594948 LEAP2Q969E1 77 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 STARD4Q96DR4 205 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 FAM167A-AS1Q96KT0 104 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 RCHY1Q96PM5 261 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 FAM103A1Q9BTL3 118 aaKnown RBP10.79□□□□□ -0.68
VRK3-209ENST00000594948 ZFP30Q9Y2G7 519 aa10.79□□□□□ -0.68
VRK3-209ENST00000594948 C20orf202A1L168 122 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms