RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 OR4A16Q8NH70 328 aa17.63■□□□□ 0.41
LSM4-204ENST00000594828 SCARB1Q8WTV0 552 aa17.63■□□□□ 0.41
LSM4-204ENST00000594828 BSCL2Q96G97 398 aaPredicted RBP17.63■□□□□ 0.41
LSM4-204ENST00000594828 C21orf62Q9NYP8 219 aa17.63■□□□□ 0.41
LSM4-204ENST00000594828 DNAH7Q8WXX0 4024 aa17.63■□□□□ 0.41
LSM4-204ENST00000594828 IGKV1-39P01597 117 aa17.62■□□□□ 0.41
LSM4-204ENST00000594828 IGKV1D-39P04432 117 aa17.62■□□□□ 0.41
LSM4-204ENST00000594828 ANKRD55Q3KP44 614 aa17.62■□□□□ 0.41
LSM4-204ENST00000594828 SPSB3Q6PJ21 355 aa17.62■□□□□ 0.41
LSM4-204ENST00000594828 RBPMS2Q6ZRY4 209 aaKnown RBP17.62■□□□□ 0.41
LSM4-204ENST00000594828 OR52B4Q8NGK2 314 aa17.62■□□□□ 0.41
LSM4-204ENST00000594828 C15orf40Q8WUR7 153 aa17.62■□□□□ 0.41
LSM4-204ENST00000594828 ATP6V0BQ99437 205 aa17.62■□□□□ 0.41
LSM4-204ENST00000594828 HIPK2Q9H2X6 1198 aa17.62■□□□□ 0.41
LSM4-204ENST00000594828 MTFP1Q9UDX5 166 aa17.62■□□□□ 0.41
LSM4-204ENST00000594828 RYR3Q15413 4870 aa17.61■□□□□ 0.41
LSM4-204ENST00000594828 TRAV25A0A0B4J276 109 aa17.61■□□□□ 0.41
LSM4-204ENST00000594828 CD3DP04234 171 aa17.61■□□□□ 0.41
LSM4-204ENST00000594828 PGAM2P15259 253 aa17.61■□□□□ 0.41
LSM4-204ENST00000594828 TMEM190Q8WZ59 177 aa17.61■□□□□ 0.41
LSM4-204ENST00000594828 MRGPRFQ96AM1 343 aa17.61■□□□□ 0.41
LSM4-204ENST00000594828 ZNF486Q96H40 463 aaPredicted RBP17.61■□□□□ 0.41
LSM4-204ENST00000594828 ABHD1Q96SE0 405 aa17.61■□□□□ 0.41
LSM4-204ENST00000594828 MRPS26Q9BYN8 205 aaKnown RBP17.61■□□□□ 0.41
LSM4-204ENST00000594828 K7EIM0 57 aa17.6■□□□□ 0.41
LSM4-204ENST00000594828 RND3P61587 244 aa17.6■□□□□ 0.41
LSM4-204ENST00000594828 ZFAND6Q6FIF0 208 aa17.6■□□□□ 0.41
LSM4-204ENST00000594828 LHFPL1Q86WI0 220 aa17.6■□□□□ 0.41
LSM4-204ENST00000594828 ARRDC1Q8N5I2 433 aa17.6■□□□□ 0.41
LSM4-204ENST00000594828 UBAC2Q8NBM4 344 aa17.6■□□□□ 0.41
LSM4-204ENST00000594828 OR1P1Q8NH06 330 aa17.6■□□□□ 0.41
LSM4-204ENST00000594828 CHRDL1Q9BU40 450 aa17.6■□□□□ 0.41
LSM4-204ENST00000594828 RETNQ9HD89 108 aa17.6■□□□□ 0.41
LSM4-204ENST00000594828 PI3P19957 117 aa17.59■□□□□ 0.41
LSM4-204ENST00000594828 TBPP20226 339 aa17.59■□□□□ 0.41
LSM4-204ENST00000594828 PIGPP57054 158 aa17.59■□□□□ 0.41
LSM4-204ENST00000594828 Q56UQ5 140 aa17.59■□□□□ 0.41
LSM4-204ENST00000594828 GPR141Q7Z602 305 aa17.59■□□□□ 0.41
LSM4-204ENST00000594828 OR2C3Q8N628 320 aa17.59■□□□□ 0.41
LSM4-204ENST00000594828 DAZ1Q9NQZ3 744 aaKnown RBP17.59■□□□□ 0.41
LSM4-204ENST00000594828 F8W735 103 aaPredicted RBP17.58■□□□□ 0.4
LSM4-204ENST00000594828 NDUFA4O00483 81 aa17.58■□□□□ 0.4
LSM4-204ENST00000594828 HSPE1P61604 102 aaKnown RBP17.58■□□□□ 0.4
LSM4-204ENST00000594828 PRCDQ00LT1 54 aa17.58■□□□□ 0.4
LSM4-204ENST00000594828 C5orf66Q9H5L9 145 aa17.58■□□□□ 0.4
LSM4-204ENST00000594828 RGS5O15539 181 aa17.57■□□□□ 0.4
LSM4-204ENST00000594828 ADMP35318 185 aa17.57■□□□□ 0.4
LSM4-204ENST00000594828 ALDH3B2P48448 385 aa17.57■□□□□ 0.4
LSM4-204ENST00000594828 TMEM229BQ8NBD8 167 aa17.57■□□□□ 0.4
LSM4-204ENST00000594828 MISP3Q96FF7 219 aa17.57■□□□□ 0.4
LSM4-204ENST00000594828 FAM110AQ9BQ89 295 aa17.57■□□□□ 0.4
LSM4-204ENST00000594828 C20orf24Q9BUV8 137 aa17.57■□□□□ 0.4
LSM4-204ENST00000594828 GAR1Q9NY12 217 aaKnown RBP17.57■□□□□ 0.4
LSM4-204ENST00000594828 CTSGP08311 255 aa17.56■□□□□ 0.4
LSM4-204ENST00000594828 TAS2R19P59542 299 aa17.56■□□□□ 0.4
LSM4-204ENST00000594828 ERHP84090 104 aaKnown RBP17.56■□□□□ 0.4
LSM4-204ENST00000594828 OR4D10Q8NGI6 311 aa17.56■□□□□ 0.4
LSM4-204ENST00000594828 TERB2Q8NHR7 220 aa17.56■□□□□ 0.4
LSM4-204ENST00000594828 ZFAND1Q8TCF1 268 aa17.56■□□□□ 0.4
LSM4-204ENST00000594828 TP53RKQ96S44 253 aa17.56■□□□□ 0.4
LSM4-204ENST00000594828 MIXL1Q9H2W2 232 aa17.56■□□□□ 0.4
LSM4-204ENST00000594828 IGHV3OR16-8A0A075B7F1 116 aa17.55■□□□□ 0.4
LSM4-204ENST00000594828 K7EMT4 169 aa17.55■□□□□ 0.4
LSM4-204ENST00000594828 CD74P04233 296 aa17.55■□□□□ 0.4
LSM4-204ENST00000594828 PPP5CP53041 499 aa17.55■□□□□ 0.4
LSM4-204ENST00000594828 MFAP4P55083 255 aa17.55■□□□□ 0.4
LSM4-204ENST00000594828 IZUMO4Q1ZYL8 232 aa17.55■□□□□ 0.4
LSM4-204ENST00000594828 SCGB2B2Q4G0G5 96 aa17.55■□□□□ 0.4
LSM4-204ENST00000594828 LAMTOR1Q6IAA8 161 aa17.55■□□□□ 0.4
LSM4-204ENST00000594828 ZNF114Q8NC26 417 aa17.55■□□□□ 0.4
LSM4-204ENST00000594828 SPAG8Q99932 426 aaPredicted RBP17.55■□□□□ 0.4
LSM4-204ENST00000594828 COPZ2Q9P299 210 aa17.55■□□□□ 0.4
LSM4-204ENST00000594828 C3orf85A0A1B0GTC6 90 aa17.54■□□□□ 0.4
LSM4-204ENST00000594828 GABARAPH6UMI1 98 aa17.54■□□□□ 0.4
LSM4-204ENST00000594828 I3L2K1 104 aa17.54■□□□□ 0.4
LSM4-204ENST00000594828 CTDSP2O14595 271 aa17.54■□□□□ 0.4
LSM4-204ENST00000594828 NUPL2O15504 423 aaKnown RBP17.54■□□□□ 0.4
LSM4-204ENST00000594828 ATG12O94817 140 aa17.54■□□□□ 0.4
LSM4-204ENST00000594828 RAB3DO95716 219 aa17.54■□□□□ 0.4
LSM4-204ENST00000594828 IGKV1-5P01602 117 aa17.54■□□□□ 0.4
LSM4-204ENST00000594828 SPCS2Q15005 226 aa17.54■□□□□ 0.4
LSM4-204ENST00000594828 TXN2Q99757 166 aa17.54■□□□□ 0.4
LSM4-204ENST00000594828 C15orf62A8K5M9 175 aa17.53■□□□□ 0.4
LSM4-204ENST00000594828 TSPAN4O14817 238 aa17.53■□□□□ 0.4
LSM4-204ENST00000594828 ZNF207O43670 478 aaKnown RBP17.53■□□□□ 0.4
LSM4-204ENST00000594828 MT-CO2P00403 227 aa17.53■□□□□ 0.4
LSM4-204ENST00000594828 AKR1C2P52895 323 aa17.53■□□□□ 0.4
LSM4-204ENST00000594828 RELQ04864 619 aaPredicted RBP17.53■□□□□ 0.4
LSM4-204ENST00000594828 STEAP1BQ6NZ63 245 aa17.53■□□□□ 0.4
LSM4-204ENST00000594828 CCDC71LQ8N9Z2 235 aa17.53■□□□□ 0.4
LSM4-204ENST00000594828 GGTLC1Q9BX51 225 aa17.53■□□□□ 0.4
LSM4-204ENST00000594828 LOC102724200A0A096LPH7 203 aaPredicted RBP17.52■□□□□ 0.4
LSM4-204ENST00000594828 A0A0B4J293 547 aa17.52■□□□□ 0.4
LSM4-204ENST00000594828 FCGR2BP31994 310 aaPredicted RBP17.52■□□□□ 0.4
LSM4-204ENST00000594828 MRPS10P82664 201 aaKnown RBP17.52■□□□□ 0.4
LSM4-204ENST00000594828 SSBP1Q04837 148 aaKnown RBP17.52■□□□□ 0.4
LSM4-204ENST00000594828 TRIM16LQ309B1 348 aa17.52■□□□□ 0.4
LSM4-204ENST00000594828 SP6Q3SY56 376 aa17.52■□□□□ 0.4
LSM4-204ENST00000594828 SPINK9Q5DT21 86 aa17.52■□□□□ 0.4
LSM4-204ENST00000594828 OR13C8Q8NGS7 320 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms