RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 GLRXP35754 106 aa13.5□□□□□ -0.25
LIG1-206ENST00000594067 MMD2Q8IY49 270 aa13.5□□□□□ -0.25
LIG1-206ENST00000594067 LPAR2Q9HBW0 351 aa13.5□□□□□ -0.25
LIG1-206ENST00000594067 ASCL3Q9NQ33 180 aa13.5□□□□□ -0.25
LIG1-206ENST00000594067 ZNRD1Q9P1U0 126 aa13.5□□□□□ -0.25
LIG1-206ENST00000594067 LY96Q9Y6Y9 160 aa13.5□□□□□ -0.25
LIG1-206ENST00000594067 V9GYV3 84 aa13.5□□□□□ -0.25
LIG1-206ENST00000594067 ITGB1BP1O14713 200 aa13.5□□□□□ -0.25
LIG1-206ENST00000594067 MMP23AO75900 390 aa13.5□□□□□ -0.25
LIG1-206ENST00000594067 MT-CO2P00403 227 aa13.5□□□□□ -0.25
LIG1-206ENST00000594067 RBM14Q96PK6 669 aaKnown RBP13.5□□□□□ -0.25
LIG1-206ENST00000594067 SAMD10Q9BYL1 202 aa13.5□□□□□ -0.25
LIG1-206ENST00000594067 PPP1R14DQ9NXH3 145 aa13.5□□□□□ -0.25
LIG1-206ENST00000594067 MBD3L4A6NDZ8 208 aaPredicted RBP13.49□□□□□ -0.25
LIG1-206ENST00000594067 MBD3L3A6NE82 208 aaPredicted RBP13.49□□□□□ -0.25
LIG1-206ENST00000594067 MBD3L5A6NJ08 208 aaPredicted RBP13.49□□□□□ -0.25
LIG1-206ENST00000594067 LINC00869P0C866 280 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 PRR20EP86478 221 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 PRR20CP86479 221 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 PRR20DP86480 221 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 PRR20BP86481 221 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 PRR20AP86496 221 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 OR5I1Q13606 314 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 ST6GALNAC3Q8NDV1 305 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 MBD3L2Q8NHZ7 208 aaPredicted RBP13.49□□□□□ -0.25
LIG1-206ENST00000594067 CCL13Q99616 98 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 FBXL7Q9UJT9 491 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 ICE1Q9Y2F5 2266 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 DSCAMO60469 2012 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 A8MXE2 369 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 J3QR06 171 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 GATA2P23769 480 aaPredicted RBP13.49□□□□□ -0.25
LIG1-206ENST00000594067 RPEL1Q2QD12 228 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.49□□□□□ -0.25
LIG1-206ENST00000594067 ZNF439Q8NDP4 499 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 NEUROG1Q92886 237 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 UHRF2Q96PU4 802 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 GNB4Q9HAV0 340 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 RNF7Q9UBF6 113 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 BOD1L1Q8NFC6 3051 aa13.49□□□□□ -0.25
LIG1-206ENST00000594067 GPX1P07203 203 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 FTH1P19P0C7X4 201 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 PSG5Q15238 335 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 TIMM23BQ5SRD1 257 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 OR8I2Q8N0Y5 310 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 FAM216BQ8N7L0 139 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 Q8N976 141 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 SNRNP40Q96DI7 357 aaKnown RBP13.48□□□□□ -0.25
LIG1-206ENST00000594067 GNB1LQ9BYB4 327 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 GCM1Q9NP62 436 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 DCAF16Q9NXF7 216 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 IGKV1-16P04430 117 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 GAFA1Q96PS6 74 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 NABP2Q9BQ15 211 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 SFXN3Q9BWM7 321 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 PLEKHA3Q9HB20 300 aa13.48□□□□□ -0.25
LIG1-206ENST00000594067 SRRM4A7MD48 611 aaKnown RBP13.47□□□□□ -0.25
LIG1-206ENST00000594067 CRYABP02511 175 aaKnown RBP13.47□□□□□ -0.25
LIG1-206ENST00000594067 MLANAQ16655 118 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 FAM222BQ8WU58 562 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 RAB9BQ9NP90 201 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 SLC45A2Q9UMX9 530 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 TRBV9A0A0B4J1U6 114 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 SFTPCP11686 197 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 CRYBB3P26998 211 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 TNFAIP6P98066 277 aaPredicted RBP13.47□□□□□ -0.25
LIG1-206ENST00000594067 RELQ04864 619 aaPredicted RBP13.47□□□□□ -0.25
LIG1-206ENST00000594067 STUMQ69YW2 141 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 SIGLECL1Q8N7X8 197 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 ADTRPQ96IZ2 230 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 FAM103A1Q9BTL3 118 aaKnown RBP13.47□□□□□ -0.25
LIG1-206ENST00000594067 PRNDQ9UKY0 176 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 IGLV3-9A0A075B6K5 115 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 IGKV1OR2-108A0A075B7D4 117 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 CT45A6P0DMU7 189 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 CT45A5P0DMU8 189 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 CT45A7P0DMV0 189 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 AREGP15514 252 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 BATFQ16520 125 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 SLC35D1Q9NTN3 355 aa13.47□□□□□ -0.25
LIG1-206ENST00000594067 UPK2O00526 184 aa13.46□□□□□ -0.25
LIG1-206ENST00000594067 IGHV1-46P01743 117 aa13.46□□□□□ -0.25
LIG1-206ENST00000594067 RND1Q92730 232 aa13.46□□□□□ -0.25
LIG1-206ENST00000594067 NCOR1P1Q9H4R4 102 aa13.46□□□□□ -0.25
LIG1-206ENST00000594067 FAM215AQ9Y5M1 114 aa13.46□□□□□ -0.25
LIG1-206ENST00000594067 KRTDAPP60985 99 aa13.46□□□□□ -0.26
LIG1-206ENST00000594067 PRCDQ00LT1 54 aa13.46□□□□□ -0.26
LIG1-206ENST00000594067 POU2AF1Q16633 256 aa13.46□□□□□ -0.26
LIG1-206ENST00000594067 C22orf34Q6ZV56 151 aa13.46□□□□□ -0.26
LIG1-206ENST00000594067 PIP4P1Q86T03 277 aa13.46□□□□□ -0.26
LIG1-206ENST00000594067 CORO2AQ92828 525 aa13.46□□□□□ -0.26
LIG1-206ENST00000594067 NAT8BQ9UHF3 227 aa13.46□□□□□ -0.26
LIG1-206ENST00000594067 TBL2Q9Y4P3 447 aaKnown RBP13.46□□□□□ -0.26
LIG1-206ENST00000594067 TEX50A0A1B0GTY4 177 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 SPINK4O60575 86 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 LINC00614P0C842 121 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 CTRLP40313 264 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 GATA4P43694 442 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 CX3CL1P78423 397 aa13.45□□□□□ -0.26
LIG1-206ENST00000594067 CENPWQ5EE01 88 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms