RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 GNB4Q9HAV0 340 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 DNAJC4Q9NNZ3 241 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 SLC45A2Q9UMX9 530 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 PAM16Q9Y3D7 125 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 KIR2DL2P43627 348 aaPredicted RBP12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 OR10J3Q5JRS4 329 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 LEMD1Q68G75 181 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 C1orf174Q8IYL3 243 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 SIGLECL1Q8N7X8 197 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 TRIB1Q96RU8 372 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 ENY2Q9NPA8 101 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 FBXL7Q9UJT9 491 aa12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 URB1O60287 2271 aaKnown RBP12.2□□□□□ -0.46
SMARCA4-219ENST00000592604 IGHV3-13P01766 116 aa12.19□□□□□ -0.46
SMARCA4-219ENST00000592604 IGHV3-7P01780 117 aa12.19□□□□□ -0.46
SMARCA4-219ENST00000592604 IGHG3P01860 377 aa12.19□□□□□ -0.46
SMARCA4-219ENST00000592604 BRS3P32247 399 aa12.19□□□□□ -0.46
SMARCA4-219ENST00000592604 POU2AF1Q16633 256 aa12.19□□□□□ -0.46
SMARCA4-219ENST00000592604 Q8N976 141 aa12.19□□□□□ -0.46
SMARCA4-219ENST00000592604 CALYQ9NYX4 217 aa12.19□□□□□ -0.46
SMARCA4-219ENST00000592604 IGHV2OR16-5A0A0B4J2B6 119 aa12.19□□□□□ -0.46
SMARCA4-219ENST00000592604 CRYBB3P26998 211 aa12.19□□□□□ -0.46
SMARCA4-219ENST00000592604 PSG5Q15238 335 aa12.19□□□□□ -0.46
SMARCA4-219ENST00000592604 TMEM136Q6ZRR5 245 aa12.19□□□□□ -0.46
SMARCA4-219ENST00000592604 CNEP1R1Q8N9A8 125 aa12.19□□□□□ -0.46
SMARCA4-219ENST00000592604 IDI2-AS1Q9NZ38 188 aa12.19□□□□□ -0.46
SMARCA4-219ENST00000592604 HEATR1Q9H583 2144 aaKnown RBP12.19□□□□□ -0.46
SMARCA4-219ENST00000592604 GCSAMQ8N6F7 178 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 RNF2Q99496 336 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 NABP2Q9BQ15 211 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 NAT8BQ9UHF3 227 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 RNF114Q9Y508 228 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 SERTM2A0A1B0GWG4 89 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 CT45A1Q5HYN5 189 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 UTF1Q5T230 341 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 VWA1Q6PCB0 445 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 PQLC2Q6ZP29 291 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 OR2Z1Q8NG97 314 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 OR4B1Q8NGF8 309 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 CT45A3Q8NHU0 189 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 ZNF503Q96F45 646 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 ZNF586Q9NXT0 402 aa12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 TECRQ9NZ01 308 aaKnown RBP12.18□□□□□ -0.46
SMARCA4-219ENST00000592604 ISLRO14498 428 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 ACTL6BO94805 426 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 OR5G3P0C626 314 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 C17orf58Q2M2W7 97 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 ZNRF1Q8ND25 227 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 CSTL1Q9H114 145 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 LNP1A1A4G5 178 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 TIGITQ495A1 244 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 PNKDQ8N490 385 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 ADTRPQ96IZ2 230 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 SLC35E1Q96K37 410 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 DSCAML1Q8TD84 2053 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 IGHV1-18A0A0C4DH31 117 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 REG1AP05451 166 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 SAA2P0DJI9 122 aaPredicted RBP12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 CTRLP40313 264 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 ATP1A1-AS1Q5TC04 95 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 DOLPP1Q86YN1 238 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 C19orf24Q9BVV8 132 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 LPAR2Q9HBW0 351 aa12.17□□□□□ -0.46
SMARCA4-219ENST00000592604 MMP23AO75900 390 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 IGLV2-8P01709 118 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 RNASE7Q9H1E1 156 aaKnown RBP12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 RAB9BQ9NP90 201 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 NRN1Q9NPD7 142 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 ZNF257Q9Y2Q1 563 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 TBL2Q9Y4P3 447 aaKnown RBP12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 OR51B2Q9Y5P1 312 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 TRIOBPQ9H2D6 2365 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 CACNA1GO43497 2377 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 IGHV3OR15-7A0A075B7D8 119 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 SMIM27A0A1W2PRY6 76 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 DIRC3C9JPN6 131 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 RTL8BQ17RB0 113 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 C9orf106Q8NAJ2 232 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 KCNS1Q96KK3 526 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 PRNDQ9UKY0 176 aa12.16□□□□□ -0.46
SMARCA4-219ENST00000592604 IGKV1OR2-108A0A075B7D4 117 aa12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 A0A1W2PS18 150 aa12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 ATP5IP56385 69 aaPredicted RBP12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 PRCDQ00LT1 54 aa12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 LEAP2Q969E1 77 aa12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 FAM103A1Q9BTL3 118 aaKnown RBP12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 ARRDC1-AS1Q9H2J1 176 aa12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 A0A1W2PRE2 83 aa12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 ZNF253O75346 499 aa12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 LHBP01229 141 aa12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 HLA-DQA1P01909 254 aa12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 AMY1AP04745 511 aa12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 MYOD1P15172 320 aa12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 PPOXP50336 477 aa12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 KRTDAPP60985 99 aa12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 PLSCR4Q9NRQ2 329 aa12.15□□□□□ -0.46
SMARCA4-219ENST00000592604 KBTBD11-OT1A0A1B0GTJ5 212 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 GGTLC3B5MD39 225 aa12.14□□□□□ -0.47
SMARCA4-219ENST00000592604 J3QR06 171 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms