RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 OR4C46A6NHA9 309 aa14.04□□□□□ -0.16
CCDC43-205ENST00000592333 BMI1P35226 326 aa14.04□□□□□ -0.16
CCDC43-205ENST00000592333 CMC4P56277 68 aaPredicted RBP14.04□□□□□ -0.16
CCDC43-205ENST00000592333 TNFRSF9Q07011 255 aa14.04□□□□□ -0.16
CCDC43-205ENST00000592333 LYSMD2Q8IV50 215 aa14.04□□□□□ -0.16
CCDC43-205ENST00000592333 YIPF6Q96EC8 236 aa14.04□□□□□ -0.16
CCDC43-205ENST00000592333 TXN2Q99757 166 aa14.04□□□□□ -0.16
CCDC43-205ENST00000592333 IGHV3-35A0A0C4DH35 117 aa14.03□□□□□ -0.16
CCDC43-205ENST00000592333 SMIM31A0A1B0GVY4 71 aa14.03□□□□□ -0.16
CCDC43-205ENST00000592333 K7EIM0 57 aa14.03□□□□□ -0.16
CCDC43-205ENST00000592333 G6PCP35575 357 aa14.03□□□□□ -0.16
CCDC43-205ENST00000592333 MFAP2P55001 183 aa14.03□□□□□ -0.16
CCDC43-205ENST00000592333 UCP3P55916 312 aa14.03□□□□□ -0.16
CCDC43-205ENST00000592333 RELQ04864 619 aaPredicted RBP14.03□□□□□ -0.16
CCDC43-205ENST00000592333 GPX8Q8TED1 209 aa14.03□□□□□ -0.16
CCDC43-205ENST00000592333 SLC25A46Q96AG3 418 aa14.03□□□□□ -0.16
CCDC43-205ENST00000592333 EPPK1P58107 5090 aaKnown RBP14.02□□□□□ -0.16
CCDC43-205ENST00000592333 A0A087WXM4 84 aa14.02□□□□□ -0.17
CCDC43-205ENST00000592333 C15orf61A6NNL5 157 aa14.02□□□□□ -0.17
CCDC43-205ENST00000592333 F8W735 103 aaPredicted RBP14.02□□□□□ -0.17
CCDC43-205ENST00000592333 SPRY2O43597 315 aa14.02□□□□□ -0.17
CCDC43-205ENST00000592333 APOA1P02647 267 aa14.02□□□□□ -0.17
CCDC43-205ENST00000592333 CD5P06127 495 aa14.02□□□□□ -0.17
CCDC43-205ENST00000592333 RPA2P15927 270 aa14.02□□□□□ -0.17
CCDC43-205ENST00000592333 HRH1P35367 487 aa14.02□□□□□ -0.17
CCDC43-205ENST00000592333 ZNF114Q8NC26 417 aa14.02□□□□□ -0.17
CCDC43-205ENST00000592333 CHRDL1Q9BU40 450 aa14.02□□□□□ -0.17
CCDC43-205ENST00000592333 HINT2Q9BX68 163 aa14.02□□□□□ -0.17
CCDC43-205ENST00000592333 FXYD6Q9H0Q3 95 aa14.02□□□□□ -0.17
CCDC43-205ENST00000592333 CTSGP08311 255 aa14.01□□□□□ -0.17
CCDC43-205ENST00000592333 ADMP35318 185 aa14.01□□□□□ -0.17
CCDC43-205ENST00000592333 TSPAN5P62079 268 aa14.01□□□□□ -0.17
CCDC43-205ENST00000592333 STPG3Q8N7X2 389 aa14.01□□□□□ -0.17
CCDC43-205ENST00000592333 GALNT14Q96FL9 552 aa14.01□□□□□ -0.17
CCDC43-205ENST00000592333 OR10C1Q96KK4 312 aa14.01□□□□□ -0.17
CCDC43-205ENST00000592333 C6orf62Q9GZU0 229 aaPredicted RBP14.01□□□□□ -0.17
CCDC43-205ENST00000592333 SELENOKQ9Y6D0 94 aa14.01□□□□□ -0.17
CCDC43-205ENST00000592333 NUPR2A6NF83 97 aa14□□□□□ -0.17
CCDC43-205ENST00000592333 NUPL2O15504 423 aaKnown RBP14□□□□□ -0.17
CCDC43-205ENST00000592333 Q56UQ5 140 aa14□□□□□ -0.17
CCDC43-205ENST00000592333 TMEM217Q8N7C4 229 aa14□□□□□ -0.17
CCDC43-205ENST00000592333 SEC22AQ96IW7 307 aa14□□□□□ -0.17
CCDC43-205ENST00000592333 SMPXQ9UHP9 88 aa14□□□□□ -0.17
CCDC43-205ENST00000592333 NSG2Q9Y328 171 aa14□□□□□ -0.17
CCDC43-205ENST00000592333 TNFAIP8O95379 198 aa13.99□□□□□ -0.17
CCDC43-205ENST00000592333 HLA-DMAP28067 261 aa13.99□□□□□ -0.17
CCDC43-205ENST00000592333 RCVRNP35243 200 aa13.99□□□□□ -0.17
CCDC43-205ENST00000592333 TGFBR1P36897 503 aa13.99□□□□□ -0.17
CCDC43-205ENST00000592333 MFAP4P55083 255 aa13.99□□□□□ -0.17
CCDC43-205ENST00000592333 PRCDQ00LT1 54 aa13.99□□□□□ -0.17
CCDC43-205ENST00000592333 ODF3L2Q3SX64 289 aa13.99□□□□□ -0.17
CCDC43-205ENST00000592333 H2BFWTQ7Z2G1 175 aa13.99□□□□□ -0.17
CCDC43-205ENST00000592333 OR4A16Q8NH70 328 aa13.99□□□□□ -0.17
CCDC43-205ENST00000592333 RNF183Q96D59 192 aa13.99□□□□□ -0.17
CCDC43-205ENST00000592333 C20orf24Q9BUV8 137 aa13.99□□□□□ -0.17
CCDC43-205ENST00000592333 I3L2K1 104 aa13.98□□□□□ -0.17
CCDC43-205ENST00000592333 HSPE1P61604 102 aaKnown RBP13.98□□□□□ -0.17
CCDC43-205ENST00000592333 LYG2Q86SG7 212 aa13.98□□□□□ -0.17
CCDC43-205ENST00000592333 TBC1D26Q86UD7 250 aa13.98□□□□□ -0.17
CCDC43-205ENST00000592333 UBAC2Q8NBM4 344 aa13.98□□□□□ -0.17
CCDC43-205ENST00000592333 ZNF486Q96H40 463 aaPredicted RBP13.98□□□□□ -0.17
CCDC43-205ENST00000592333 BIRC6Q9NR09 4857 aa13.97□□□□□ -0.17
CCDC43-205ENST00000592333 IGHV7-4-1A0A0J9YVY3 117 aa13.97□□□□□ -0.17
CCDC43-205ENST00000592333 DBX1A6NMT0 343 aa13.97□□□□□ -0.17
CCDC43-205ENST00000592333 INS-IGF2F8WCM5 200 aa13.97□□□□□ -0.17
CCDC43-205ENST00000592333 EIF4EP06730 217 aaKnown RBP13.97□□□□□ -0.17
CCDC43-205ENST00000592333 CTSDP07339 412 aaPredicted RBP13.97□□□□□ -0.17
CCDC43-205ENST00000592333 ERHP84090 104 aaKnown RBP13.97□□□□□ -0.17
CCDC43-205ENST00000592333 PHLDA2Q53GA4 152 aa13.97□□□□□ -0.17
CCDC43-205ENST00000592333 TMEM116Q8NCL8 245 aa13.97□□□□□ -0.17
CCDC43-205ENST00000592333 LINC00476Q8WZB0 136 aa13.97□□□□□ -0.17
CCDC43-205ENST00000592333 NXF2Q9GZY0 626 aaKnown RBP13.97□□□□□ -0.17
CCDC43-205ENST00000592333 MAP6D1Q9H9H5 199 aa13.97□□□□□ -0.17
CCDC43-205ENST00000592333 UBQLN2Q9UHD9 624 aa13.97□□□□□ -0.17
CCDC43-205ENST00000592333 TRAV14DV4A0A0A6YYC5 116 aa13.96□□□□□ -0.17
CCDC43-205ENST00000592333 A0A0J9YWU9 116 aa13.96□□□□□ -0.17
CCDC43-205ENST00000592333 CHEK1O14757 476 aa13.96□□□□□ -0.17
CCDC43-205ENST00000592333 RND3P61587 244 aa13.96□□□□□ -0.17
CCDC43-205ENST00000592333 LSM3P62310 102 aaKnown RBP13.96□□□□□ -0.17
CCDC43-205ENST00000592333 DEFB135Q30KP9 77 aa13.96□□□□□ -0.17
CCDC43-205ENST00000592333 RHPN1-AS1Q9BWJ2 59 aa13.96□□□□□ -0.17
CCDC43-205ENST00000592333 COMMD3Q9UBI1 195 aa13.96□□□□□ -0.17
CCDC43-205ENST00000592333 HYDINQ4G0P3 5121 aa13.96□□□□□ -0.18
CCDC43-205ENST00000592333 PLECQ15149 4684 aaKnown RBP13.95□□□□□ -0.18
CCDC43-205ENST00000592333 IGHV3-21A0A0B4J1V1 117 aa13.95□□□□□ -0.18
CCDC43-205ENST00000592333 CXorf65A6NEN9 183 aa13.95□□□□□ -0.18
CCDC43-205ENST00000592333 ATG12O94817 140 aa13.95□□□□□ -0.18
CCDC43-205ENST00000592333 CEMP1Q6PRD7 247 aaPredicted RBP13.95□□□□□ -0.18
CCDC43-205ENST00000592333 GATAD1Q8WUU5 269 aa13.95□□□□□ -0.18
CCDC43-205ENST00000592333 RNF2Q99496 336 aa13.95□□□□□ -0.18
CCDC43-205ENST00000592333 GINS3Q9BRX5 216 aa13.95□□□□□ -0.18
CCDC43-205ENST00000592333 KLK5Q9Y337 293 aaPredicted RBP13.95□□□□□ -0.18
CCDC43-205ENST00000592333 MT-CO2P00403 227 aa13.94□□□□□ -0.18
CCDC43-205ENST00000592333 IGKV1-39P01597 117 aa13.94□□□□□ -0.18
CCDC43-205ENST00000592333 IGKV1D-39P04432 117 aa13.94□□□□□ -0.18
CCDC43-205ENST00000592333 TBPP20226 339 aa13.94□□□□□ -0.18
CCDC43-205ENST00000592333 NPBWR1P48145 328 aa13.94□□□□□ -0.18
CCDC43-205ENST00000592333 PAFAH1B2P68402 229 aa13.94□□□□□ -0.18
CCDC43-205ENST00000592333 FAM90A2PQ658T7 463 aa13.94□□□□□ -0.18
CCDC43-205ENST00000592333 ARRDC1Q8N5I2 433 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms