RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 TPT1P13693 172 aaKnown RBP13.84□□□□□ -0.19
CXXC1-212ENST00000589940 SLC38A11Q08AI6 406 aa13.84□□□□□ -0.19
CXXC1-212ENST00000589940 ZNF266Q14584 549 aa13.84□□□□□ -0.19
CXXC1-212ENST00000589940 HSD17B13Q7Z5P4 300 aaPredicted RBP13.84□□□□□ -0.19
CXXC1-212ENST00000589940 C5orf56Q8N8D9 126 aa13.84□□□□□ -0.19
CXXC1-212ENST00000589940 UBAC2Q8NBM4 344 aa13.84□□□□□ -0.19
CXXC1-212ENST00000589940 PINX1Q96BK5 328 aaKnown RBP13.84□□□□□ -0.19
CXXC1-212ENST00000589940 ATP5SQ99766 215 aa13.84□□□□□ -0.19
CXXC1-212ENST00000589940 SRSF8Q9BRL6 282 aaKnown RBP13.84□□□□□ -0.19
CXXC1-212ENST00000589940 BORCS7-ASMTA0A0B4J1R7 106 aa13.83□□□□□ -0.2
CXXC1-212ENST00000589940 DFFBO76075 338 aa13.83□□□□□ -0.2
CXXC1-212ENST00000589940 CFDP00746 253 aaPredicted RBP13.83□□□□□ -0.2
CXXC1-212ENST00000589940 RNASE2P10153 161 aaKnown RBP13.83□□□□□ -0.2
CXXC1-212ENST00000589940 LY6EQ16553 131 aa13.83□□□□□ -0.2
CXXC1-212ENST00000589940 C2orf83Q53S99 150 aa13.83□□□□□ -0.2
CXXC1-212ENST00000589940 SPNS3Q6ZMD2 512 aa13.83□□□□□ -0.2
CXXC1-212ENST00000589940 ETV3LQ6ZN32 361 aa13.83□□□□□ -0.2
CXXC1-212ENST00000589940 LILRB2Q8N423 598 aa13.83□□□□□ -0.2
CXXC1-212ENST00000589940 YAE1D1Q9NRH1 226 aa13.83□□□□□ -0.2
CXXC1-212ENST00000589940 RGS13O14921 159 aa13.83□□□□□ -0.2
CXXC1-212ENST00000589940 IFNA4P05014 189 aa13.83□□□□□ -0.2
CXXC1-212ENST00000589940 EIF5AP63241 154 aaKnown RBP13.83□□□□□ -0.2
CXXC1-212ENST00000589940 ZNF680Q8NEM1 530 aa13.83□□□□□ -0.2
CXXC1-212ENST00000589940 SSMEM1Q8WWF3 244 aa13.83□□□□□ -0.2
CXXC1-212ENST00000589940 ARPC1AQ92747 370 aa13.83□□□□□ -0.2
CXXC1-212ENST00000589940 SONP18583 2426 aaKnown RBP13.82□□□□□ -0.2
CXXC1-212ENST00000589940 IGHV7-81A0A0B4J1V7 117 aa13.82□□□□□ -0.2
CXXC1-212ENST00000589940 AREGP15514 252 aa13.82□□□□□ -0.2
CXXC1-212ENST00000589940 IER3P46695 156 aa13.82□□□□□ -0.2
CXXC1-212ENST00000589940 IL17RELQ6ZVW7 336 aa13.82□□□□□ -0.2
CXXC1-212ENST00000589940 BAP18Q8IXM2 172 aa13.82□□□□□ -0.2
CXXC1-212ENST00000589940 IGHV4-59P01825 116 aa13.82□□□□□ -0.2
CXXC1-212ENST00000589940 APELAP0DMC3 54 aa13.82□□□□□ -0.2
CXXC1-212ENST00000589940 NDPQ00604 133 aa13.82□□□□□ -0.2
CXXC1-212ENST00000589940 ATP6V1FQ16864 119 aa13.82□□□□□ -0.2
CXXC1-212ENST00000589940 C16orf82Q7Z2V1 217 aa13.82□□□□□ -0.2
CXXC1-212ENST00000589940 ZNF114Q8NC26 417 aa13.82□□□□□ -0.2
CXXC1-212ENST00000589940 OR5R1Q8NH85 324 aa13.82□□□□□ -0.2
CXXC1-212ENST00000589940 PRDM13Q9H4Q3 707 aa13.82□□□□□ -0.2
CXXC1-212ENST00000589940 ANK3Q12955 4377 aaKnown RBP13.82□□□□□ -0.2
CXXC1-212ENST00000589940 PRSS46E5RG02 174 aa13.81□□□□□ -0.2
CXXC1-212ENST00000589940 IFNA7P01567 189 aa13.81□□□□□ -0.2
CXXC1-212ENST00000589940 REG1AP05451 166 aa13.81□□□□□ -0.2
CXXC1-212ENST00000589940 SUB1P53999 127 aaKnown RBP eCLIP13.81□□□□□ -0.25e-7■■■■■ 33
CXXC1-212ENST00000589940 TUSC1Q2TAM9 212 aa13.81□□□□□ -0.2
CXXC1-212ENST00000589940 Q6YL49 198 aa13.81□□□□□ -0.2
CXXC1-212ENST00000589940 ZNF767PQ75MW2 155 aa13.81□□□□□ -0.2
CXXC1-212ENST00000589940 ABHD5Q8WTS1 349 aa13.81□□□□□ -0.2
CXXC1-212ENST00000589940 ZNF48Q96MX3 618 aaPredicted RBP13.81□□□□□ -0.2
CXXC1-212ENST00000589940 P2RX4Q99571 388 aa13.81□□□□□ -0.2
CXXC1-212ENST00000589940 HSPB9Q9BQS6 159 aa13.81□□□□□ -0.2
CXXC1-212ENST00000589940 FAM103A1Q9BTL3 118 aaKnown RBP13.81□□□□□ -0.2
CXXC1-212ENST00000589940 M0QZK8 103 aa13.8□□□□□ -0.2
CXXC1-212ENST00000589940 AMY1AP04745 511 aa13.8□□□□□ -0.2
CXXC1-212ENST00000589940 SRP14P37108 136 aaKnown RBP13.8□□□□□ -0.2
CXXC1-212ENST00000589940 EXOSC2Q13868 293 aaKnown RBP13.8□□□□□ -0.2
CXXC1-212ENST00000589940 PHYHIPLQ96FC7 376 aa13.8□□□□□ -0.2
CXXC1-212ENST00000589940 ARV1Q9H2C2 271 aa13.8□□□□□ -0.2
CXXC1-212ENST00000589940 TMEM147Q9BVK8 224 aa13.8□□□□□ -0.2
CXXC1-212ENST00000589940 GGACTQ9BVM4 153 aa13.8□□□□□ -0.2
CXXC1-212ENST00000589940 BTBD17A6NE02 478 aa13.79□□□□□ -0.2
CXXC1-212ENST00000589940 IFNA5P01569 189 aa13.79□□□□□ -0.2
CXXC1-212ENST00000589940 HNF1AP20823 631 aa13.79□□□□□ -0.2
CXXC1-212ENST00000589940 ALKAL2Q6UX46 152 aa13.79□□□□□ -0.2
CXXC1-212ENST00000589940 UQCC1Q9NVA1 299 aa13.79□□□□□ -0.2
CXXC1-212ENST00000589940 VWC2Q2TAL6 325 aa13.79□□□□□ -0.2
CXXC1-212ENST00000589940 OR1P1Q8NH06 330 aa13.79□□□□□ -0.2
CXXC1-212ENST00000589940 GINS3Q9BRX5 216 aa13.79□□□□□ -0.2
CXXC1-212ENST00000589940 SH2D7A6NKC9 451 aaPredicted RBP13.78□□□□□ -0.2
CXXC1-212ENST00000589940 DLK1P80370 383 aa13.78□□□□□ -0.2
CXXC1-212ENST00000589940 SLC25A24Q6NUK1 477 aa13.78□□□□□ -0.2
CXXC1-212ENST00000589940 HSD17B11Q8NBQ5 300 aa13.78□□□□□ -0.2
CXXC1-212ENST00000589940 TMEM160Q9NX00 188 aa13.78□□□□□ -0.2
CXXC1-212ENST00000589940 UBQLN2Q9UHD9 624 aa13.78□□□□□ -0.2
CXXC1-212ENST00000589940 FBXO7Q9Y3I1 522 aa13.78□□□□□ -0.2
CXXC1-212ENST00000589940 F11RQ9Y624 299 aaKnown RBP13.78□□□□□ -0.2
CXXC1-212ENST00000589940 UBE2L5PA0A1B0GUS4 154 aa13.78□□□□□ -0.2
CXXC1-212ENST00000589940 EGR2P11161 476 aaPredicted RBP13.78□□□□□ -0.2
CXXC1-212ENST00000589940 CTRB1P17538 263 aa13.78□□□□□ -0.2
CXXC1-212ENST00000589940 PVRIGQ6DKI7 326 aa13.78□□□□□ -0.2
CXXC1-212ENST00000589940 CTRB2Q6GPI1 263 aa13.78□□□□□ -0.2
CXXC1-212ENST00000589940 RNASEH2CQ8TDP1 164 aaKnown RBP13.78□□□□□ -0.2
CXXC1-212ENST00000589940 SCARB1Q8WTV0 552 aa13.78□□□□□ -0.2
CXXC1-212ENST00000589940 PARP11Q9NR21 331 aa13.78□□□□□ -0.2
CXXC1-212ENST00000589940 VPREB3Q9UKI3 123 aa13.78□□□□□ -0.2
CXXC1-212ENST00000589940 ASPHD1Q5U4P2 390 aa13.77□□□□□ -0.21
CXXC1-212ENST00000589940 EIF5AL1Q6IS14 154 aaKnown RBP13.77□□□□□ -0.21
CXXC1-212ENST00000589940 C19orf35Q6ZS72 473 aa13.77□□□□□ -0.21
CXXC1-212ENST00000589940 SGMS2Q8NHU3 365 aa13.77□□□□□ -0.21
CXXC1-212ENST00000589940 SMR3AQ99954 134 aa13.77□□□□□ -0.21
CXXC1-212ENST00000589940 PARD6GQ9BYG4 376 aaPredicted RBP13.77□□□□□ -0.21
CXXC1-212ENST00000589940 LFNGQ8NES3 379 aa13.76□□□□□ -0.21
CXXC1-212ENST00000589940 TMED6Q8WW62 240 aa13.76□□□□□ -0.21
CXXC1-212ENST00000589940 NPIPB5A8MRT5 1133 aa13.76□□□□□ -0.21
CXXC1-212ENST00000589940 ATP6V0E1O15342 81 aa13.76□□□□□ -0.21
CXXC1-212ENST00000589940 HOXA3O43365 443 aaPredicted RBP13.76□□□□□ -0.21
CXXC1-212ENST00000589940 CRYGCP07315 174 aa13.76□□□□□ -0.21
CXXC1-212ENST00000589940 MFAP2P55001 183 aa13.76□□□□□ -0.21
CXXC1-212ENST00000589940 SIGLECL1Q8N7X8 197 aa13.76□□□□□ -0.21
CXXC1-212ENST00000589940 SCGB1C1Q8TD33 95 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms