RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 SLC51BQ86UW2 128 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 STPG2Q8N412 459 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 OR4A5Q8NH83 315 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 SMIM8Q96KF7 97 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 CIB3Q96Q77 187 aaPredicted RBP15.86■□□□□ 0.13
ATG4D-208ENST00000588667 ZNF580Q9UK33 172 aa15.86■□□□□ 0.13
ATG4D-208ENST00000588667 FOXA2Q9Y261 457 aaPredicted RBP15.86■□□□□ 0.13
ATG4D-208ENST00000588667 UPK2O00526 184 aa15.85■□□□□ 0.13
ATG4D-208ENST00000588667 TAAR5O14804 337 aa15.85■□□□□ 0.13
ATG4D-208ENST00000588667 RGS13O14921 159 aa15.85■□□□□ 0.13
ATG4D-208ENST00000588667 FBXO24O75426 580 aa15.85■□□□□ 0.13
ATG4D-208ENST00000588667 TMEM50AO95807 157 aa15.85■□□□□ 0.13
ATG4D-208ENST00000588667 IGF1P05019 195 aa15.85■□□□□ 0.13
ATG4D-208ENST00000588667 VMA21Q3ZAQ7 101 aa15.85■□□□□ 0.13
ATG4D-208ENST00000588667 PUSL1Q8N0Z8 303 aaKnown RBP15.85■□□□□ 0.13
ATG4D-208ENST00000588667 OR5AU1Q8NGC0 362 aa15.85■□□□□ 0.13
ATG4D-208ENST00000588667 TRAV3A0A0B4J244 114 aa15.84■□□□□ 0.13
ATG4D-208ENST00000588667 PSMB11A5LHX3 300 aa15.84■□□□□ 0.13
ATG4D-208ENST00000588667 CEBPZOSA8MTT3 80 aa15.84■□□□□ 0.13
ATG4D-208ENST00000588667 IAPPP10997 89 aa15.84■□□□□ 0.13
ATG4D-208ENST00000588667 PAX9P55771 341 aa15.84■□□□□ 0.13
ATG4D-208ENST00000588667 PDLIM3Q53GG5 364 aaPredicted RBP15.84■□□□□ 0.13
ATG4D-208ENST00000588667 PPP1R27Q86WC6 154 aa15.84■□□□□ 0.13
ATG4D-208ENST00000588667 C11orf44Q8N8P7 122 aa15.84■□□□□ 0.13
ATG4D-208ENST00000588667 DTD1Q8TEA8 209 aa15.84■□□□□ 0.13
ATG4D-208ENST00000588667 CLCC1Q96S66 551 aa15.84■□□□□ 0.13
ATG4D-208ENST00000588667 TPSG1Q9NRR2 321 aa15.84■□□□□ 0.13
ATG4D-208ENST00000588667 TMEM14BQ9NUH8 114 aa15.84■□□□□ 0.13
ATG4D-208ENST00000588667 FKBP11Q9NYL4 201 aa15.84■□□□□ 0.13
ATG4D-208ENST00000588667 PSENENQ9NZ42 101 aa15.84■□□□□ 0.13
ATG4D-208ENST00000588667 LINC00527Q9UJ94 153 aa15.84■□□□□ 0.13
ATG4D-208ENST00000588667 FAM24AA6NFZ4 105 aa15.83■□□□□ 0.13
ATG4D-208ENST00000588667 KBTBD11O94819 623 aa15.83■□□□□ 0.13
ATG4D-208ENST00000588667 CRYGBP07316 175 aa15.83■□□□□ 0.13
ATG4D-208ENST00000588667 CX3CL1P78423 397 aa15.83■□□□□ 0.13
ATG4D-208ENST00000588667 EWSR1Q01844 656 aaKnown RBP eCLIP15.83■□□□□ 0.13
ATG4D-208ENST00000588667 BAXQ07812 192 aa15.83■□□□□ 0.13
ATG4D-208ENST00000588667 TMEM252Q8N6L7 170 aa15.83■□□□□ 0.13
ATG4D-208ENST00000588667 TRRAPQ9Y4A5 3859 aa15.83■□□□□ 0.13
ATG4D-208ENST00000588667 FCN1O00602 326 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 ATP6V0E1O15342 81 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 CA2P00918 260 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 CD28P10747 220 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 SLC35B1P78383 322 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 NDPQ00604 133 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 TEX261Q6UWH6 196 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 ZNF562Q6V9R5 426 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 STX12Q86Y82 276 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 TEX45Q8NA69 505 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 OR4X2Q8NGF9 303 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 TMEM167AQ8TBQ9 72 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 ZNF471Q9BX82 626 aaPredicted RBP15.83■□□□□ 0.12
ATG4D-208ENST00000588667 PARP11Q9NR21 331 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 ZNF257Q9Y2Q1 563 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 U3KQ87 197 aa15.83■□□□□ 0.12
ATG4D-208ENST00000588667 IGSF23A1L1A6 192 aa15.82■□□□□ 0.12
ATG4D-208ENST00000588667 FGF2P09038 288 aa15.82■□□□□ 0.12
ATG4D-208ENST00000588667 HSPE1P61604 102 aaKnown RBP15.82■□□□□ 0.12
ATG4D-208ENST00000588667 C10orf99Q6UWK7 81 aa15.82■□□□□ 0.12
ATG4D-208ENST00000588667 ZNF767PQ75MW2 155 aa15.82■□□□□ 0.12
ATG4D-208ENST00000588667 OR51B2Q9Y5P1 312 aa15.82■□□□□ 0.12
ATG4D-208ENST00000588667 IFNA7P01567 189 aa15.81■□□□□ 0.12
ATG4D-208ENST00000588667 ZNF329Q86UD4 541 aa15.81■□□□□ 0.12
ATG4D-208ENST00000588667 OR5B3Q8NH48 314 aa15.81■□□□□ 0.12
ATG4D-208ENST00000588667 SGMS2Q8NHU3 365 aa15.81■□□□□ 0.12
ATG4D-208ENST00000588667 FBXL17Q9UF56 701 aa15.81■□□□□ 0.12
ATG4D-208ENST00000588667 H3BP45 60 aa15.8■□□□□ 0.12
ATG4D-208ENST00000588667 CRIP2P52943 208 aaPredicted RBP15.8■□□□□ 0.12
ATG4D-208ENST00000588667 RPL8P62917 257 aaKnown RBP15.8■□□□□ 0.12
ATG4D-208ENST00000588667 NHLH2Q02577 135 aa15.8■□□□□ 0.12
ATG4D-208ENST00000588667 SPANXN5Q5MJ07 72 aa15.8■□□□□ 0.12
ATG4D-208ENST00000588667 COMMD1Q8N668 190 aa15.8■□□□□ 0.12
ATG4D-208ENST00000588667 HIPK2Q9H2X6 1198 aa15.8■□□□□ 0.12
ATG4D-208ENST00000588667 SULT1A1P50225 295 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 EIF5AP63241 154 aaKnown RBP15.79■□□□□ 0.12
ATG4D-208ENST00000588667 RPP30P78346 268 aaKnown RBP15.79■□□□□ 0.12
ATG4D-208ENST00000588667 CFHR3Q02985 330 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 PJVKQ0ZLH3 352 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 TCTEX1D4Q5JR98 221 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 ZNF680Q8NEM1 530 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 ARPC1AQ92747 370 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 CITED2Q99967 270 aaPredicted RBP15.79■□□□□ 0.12
ATG4D-208ENST00000588667 COMMD5Q9GZQ3 224 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 ENY2Q9NPA8 101 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 FBXO7Q9Y3I1 522 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 M0QZ24 198 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 TPT1P13693 172 aaKnown RBP15.79■□□□□ 0.12
ATG4D-208ENST00000588667 HOXA1P49639 335 aaPredicted RBP15.79■□□□□ 0.12
ATG4D-208ENST00000588667 SSBP2P81877 361 aaPredicted RBP15.79■□□□□ 0.12
ATG4D-208ENST00000588667 PRSS8Q16651 343 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 SPINK9Q5DT21 86 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 HIST2H2BDQ6DRA6 164 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 STOML3Q8TAV4 291 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 ABHD5Q8WTS1 349 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 ST8SIA2Q92186 375 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 SMIM3Q9BZL3 60 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 CYTL1Q9NRR1 136 aa15.79■□□□□ 0.12
ATG4D-208ENST00000588667 STRAPQ9Y3F4 350 aaKnown RBP15.79■□□□□ 0.12
ATG4D-208ENST00000588667 TRAV41A0A0B4J266 112 aa15.78■□□□□ 0.12
ATG4D-208ENST00000588667 JTBO76095 146 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms