RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 LYRM1O43325 122 aa15.54■□□□□ 0.08
DDX39A-207ENST00000588542 ANXA3P12429 323 aa15.54■□□□□ 0.08
DDX39A-207ENST00000588542 MFAP2P55001 183 aa15.54■□□□□ 0.08
DDX39A-207ENST00000588542 PPP1R1AQ13522 171 aa15.54■□□□□ 0.08
DDX39A-207ENST00000588542 ZNF846Q147U1 533 aa15.54■□□□□ 0.08
DDX39A-207ENST00000588542 AARDQ4LEZ3 155 aa15.54■□□□□ 0.08
DDX39A-207ENST00000588542 DCUN1D4Q92564 292 aa15.54■□□□□ 0.08
DDX39A-207ENST00000588542 DLX4Q92988 240 aaPredicted RBP15.54■□□□□ 0.08
DDX39A-207ENST00000588542 WDR12Q9GZL7 423 aaKnown RBP15.54■□□□□ 0.08
DDX39A-207ENST00000588542 RANGRFQ9HD47 186 aaPredicted RBP15.54■□□□□ 0.08
DDX39A-207ENST00000588542 PEF1Q9UBV8 284 aaKnown RBP15.54■□□□□ 0.08
DDX39A-207ENST00000588542 F11RQ9Y624 299 aaKnown RBP15.54■□□□□ 0.08
DDX39A-207ENST00000588542 DUS4LO95620 317 aaKnown RBP15.53■□□□□ 0.08
DDX39A-207ENST00000588542 VAMP1P23763 118 aa15.53■□□□□ 0.08
DDX39A-207ENST00000588542 MECP2P51608 486 aaKnown RBP15.53■□□□□ 0.08
DDX39A-207ENST00000588542 ANKRD55Q3KP44 614 aa15.53■□□□□ 0.08
DDX39A-207ENST00000588542 SPINK9Q5DT21 86 aa15.53■□□□□ 0.08
DDX39A-207ENST00000588542 LYZL2Q7Z4W2 148 aa15.53■□□□□ 0.08
DDX39A-207ENST00000588542 LGI3Q8N145 548 aa15.53■□□□□ 0.08
DDX39A-207ENST00000588542 OR2C3Q8N628 320 aa15.53■□□□□ 0.08
DDX39A-207ENST00000588542 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.52■□□□□ 0.08
DDX39A-207ENST00000588542 A0A0B4J2A0 478 aa15.52■□□□□ 0.08
DDX39A-207ENST00000588542 SFT2D2O95562 160 aa15.52■□□□□ 0.08
DDX39A-207ENST00000588542 HOXD3P31249 432 aaPredicted RBP15.52■□□□□ 0.08
DDX39A-207ENST00000588542 UBE2MP61081 183 aaKnown RBP15.52■□□□□ 0.08
DDX39A-207ENST00000588542 SRPXP78539 464 aa15.52■□□□□ 0.08
DDX39A-207ENST00000588542 NMSQ5H8A3 153 aa15.52■□□□□ 0.08
DDX39A-207ENST00000588542 LRTM2Q8N967 370 aa15.52■□□□□ 0.08
DDX39A-207ENST00000588542 MCRIP2Q9BUT9 160 aaKnown RBP15.52■□□□□ 0.08
DDX39A-207ENST00000588542 CACNG5Q9UF02 275 aa15.52■□□□□ 0.08
DDX39A-207ENST00000588542 SHPKQ9UHJ6 478 aa15.52■□□□□ 0.08
DDX39A-207ENST00000588542 TBC1D24Q9ULP9 559 aa15.52■□□□□ 0.08
DDX39A-207ENST00000588542 S4R3C0 116 aa15.52■□□□□ 0.08
DDX39A-207ENST00000588542 MFSD2BA6NFX1 497 aa15.51■□□□□ 0.07
DDX39A-207ENST00000588542 INS-IGF2F8WCM5 200 aa15.51■□□□□ 0.07
DDX39A-207ENST00000588542 IFNA17P01571 189 aa15.51■□□□□ 0.07
DDX39A-207ENST00000588542 CCDC140Q96MF4 163 aa15.51■□□□□ 0.07
DDX39A-207ENST00000588542 PLEKHA3Q9HB20 300 aa15.51■□□□□ 0.07
DDX39A-207ENST00000588542 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.51■□□□□ 0.07
DDX39A-207ENST00000588542 BMPR1BO00238 502 aa15.5■□□□□ 0.07
DDX39A-207ENST00000588542 OVOL1O14753 267 aa15.5■□□□□ 0.07
DDX39A-207ENST00000588542 IGHV3-23P01764 117 aa15.5■□□□□ 0.07
DDX39A-207ENST00000588542 DEFA6Q01524 100 aa15.5■□□□□ 0.07
DDX39A-207ENST00000588542 SLC25A24Q6NUK1 477 aa15.5■□□□□ 0.07
DDX39A-207ENST00000588542 ZNF114Q8NC26 417 aa15.5■□□□□ 0.07
DDX39A-207ENST00000588542 OR1P1Q8NH06 330 aa15.5■□□□□ 0.07
DDX39A-207ENST00000588542 C9orf170A2RU37 121 aa15.49■□□□□ 0.07
DDX39A-207ENST00000588542 WIPF1O43516 503 aa15.49■□□□□ 0.07
DDX39A-207ENST00000588542 UPK1BO75841 260 aa15.49■□□□□ 0.07
DDX39A-207ENST00000588542 ANXA7P20073 488 aaKnown RBP15.49■□□□□ 0.07
DDX39A-207ENST00000588542 ZP3P21754 424 aa15.49■□□□□ 0.07
DDX39A-207ENST00000588542 SPCS3P61009 180 aa15.49■□□□□ 0.07
DDX39A-207ENST00000588542 IFITM3Q01628 133 aa15.49■□□□□ 0.07
DDX39A-207ENST00000588542 KLF5Q13887 457 aaPredicted RBP15.49■□□□□ 0.07
DDX39A-207ENST00000588542 PDLIM3Q53GG5 364 aaPredicted RBP15.49■□□□□ 0.07
DDX39A-207ENST00000588542 OR52E5Q8NH55 327 aa15.49■□□□□ 0.07
DDX39A-207ENST00000588542 EEF1AKMT3Q96AZ1 226 aa15.49■□□□□ 0.07
DDX39A-207ENST00000588542 PDCD10Q9BUL8 212 aa15.49■□□□□ 0.07
DDX39A-207ENST00000588542 THYN1Q9P016 225 aa15.49■□□□□ 0.07
DDX39A-207ENST00000588542 DUXBA0A1W2PPF3 345 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 SEC14L6B5MCN3 397 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 PPP5D1E7EU14 171 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 CYB5BO43169 146 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 TCRBP04435 133 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 OR4E1P0C645 316 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 SULT1A3P0DMM9 295 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 SULT1A4P0DMN0 295 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 ERHP84090 104 aaKnown RBP15.48■□□□□ 0.07
DDX39A-207ENST00000588542 ASAH1Q13510 395 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 CLEC19AQ6UXS0 136 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 OR1L6Q8NGR2 347 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 ZNF502Q8TBZ5 544 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 CXorf58Q96LI9 332 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 GPR61Q9BZJ8 451 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 C20orf85Q9H1P6 137 aa15.48■□□□□ 0.07
DDX39A-207ENST00000588542 TRBV7-1A0A0A6YYK4 115 aa15.47■□□□□ 0.07
DDX39A-207ENST00000588542 K7EIM0 57 aa15.47■□□□□ 0.07
DDX39A-207ENST00000588542 HLA-AP01891 365 aaKnown RBP15.47■□□□□ 0.07
DDX39A-207ENST00000588542 DHRS2Q13268 280 aa15.47■□□□□ 0.07
DDX39A-207ENST00000588542 SMCO1Q147U7 214 aa15.47■□□□□ 0.07
DDX39A-207ENST00000588542 FAM209BQ5JX69 171 aa15.47■□□□□ 0.07
DDX39A-207ENST00000588542 C9orf66Q5T8R8 295 aa15.47■□□□□ 0.07
DDX39A-207ENST00000588542 VN1R17PQ8TDU5 208 aa15.47■□□□□ 0.07
DDX39A-207ENST00000588542 PRKDCP78527 4128 aaKnown RBP15.46■□□□□ 0.07
DDX39A-207ENST00000588542 PIGBOS1A0A0B4J2F0 54 aa15.46■□□□□ 0.07
DDX39A-207ENST00000588542 HOXA1P49639 335 aaPredicted RBP15.46■□□□□ 0.07
DDX39A-207ENST00000588542 KRTAP10-11P60412 298 aa15.46■□□□□ 0.07
DDX39A-207ENST00000588542 EGFEM1PQ0D2K5 195 aa15.46■□□□□ 0.07
DDX39A-207ENST00000588542 RPEL1Q2QD12 228 aa15.46■□□□□ 0.07
DDX39A-207ENST00000588542 PVRIGQ6DKI7 326 aa15.46■□□□□ 0.07
DDX39A-207ENST00000588542 ACSM6Q6P461 480 aa15.46■□□□□ 0.07
DDX39A-207ENST00000588542 LYG2Q86SG7 212 aa15.46■□□□□ 0.07
DDX39A-207ENST00000588542 IGHV3-21A0A0B4J1V1 117 aa15.45■□□□□ 0.06
DDX39A-207ENST00000588542 A0A1B0GU03 582 aa15.45■□□□□ 0.06
DDX39A-207ENST00000588542 NXPH3O95157 252 aa15.45■□□□□ 0.06
DDX39A-207ENST00000588542 PRB2P02812 416 aaPredicted RBP15.45■□□□□ 0.06
DDX39A-207ENST00000588542 RNASE2P10153 161 aaKnown RBP15.45■□□□□ 0.06
DDX39A-207ENST00000588542 SYNJ2BPP57105 145 aa15.45■□□□□ 0.06
DDX39A-207ENST00000588542 BSXQ3C1V8 233 aa15.45■□□□□ 0.06
DDX39A-207ENST00000588542 SCARB1Q8WTV0 552 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms