RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 TNFAIP8O95379 198 aa10.68□□□□□ -0.7
VMP1-206ENST00000587945 IGKV1-39P01597 117 aa10.68□□□□□ -0.7
VMP1-206ENST00000587945 IGKV1D-39P04432 117 aa10.68□□□□□ -0.7
VMP1-206ENST00000587945 Q56UQ5 140 aa10.68□□□□□ -0.7
VMP1-206ENST00000587945 TBC1D26Q86UD7 250 aa10.68□□□□□ -0.7
VMP1-206ENST00000587945 CADM3Q8N126 398 aa10.68□□□□□ -0.7
VMP1-206ENST00000587945 OR2C3Q8N628 320 aa10.68□□□□□ -0.7
VMP1-206ENST00000587945 IL17DQ8TAD2 202 aa10.68□□□□□ -0.7
VMP1-206ENST00000587945 FUNDC2Q9BWH2 189 aa10.68□□□□□ -0.7
VMP1-206ENST00000587945 TMEM14BQ9NUH8 114 aa10.68□□□□□ -0.7
VMP1-206ENST00000587945 ALMS1Q8TCU4 4167 aa10.67□□□□□ -0.7
VMP1-206ENST00000587945 SMIM31A0A1B0GVY4 71 aa10.67□□□□□ -0.7
VMP1-206ENST00000587945 C15orf61A6NNL5 157 aa10.67□□□□□ -0.7
VMP1-206ENST00000587945 M0QYG6 137 aa10.67□□□□□ -0.7
VMP1-206ENST00000587945 NDUFA4O00483 81 aa10.67□□□□□ -0.7
VMP1-206ENST00000587945 APOA1P02647 267 aa10.67□□□□□ -0.7
VMP1-206ENST00000587945 ELK1P19419 428 aa10.67□□□□□ -0.7
VMP1-206ENST00000587945 RNASE12Q5GAN4 147 aaKnown RBP10.67□□□□□ -0.7
VMP1-206ENST00000587945 SPSB3Q6PJ21 355 aa10.67□□□□□ -0.7
VMP1-206ENST00000587945 SLC38A6Q8IZM9 456 aa10.67□□□□□ -0.7
VMP1-206ENST00000587945 OR5B3Q8NH48 314 aa10.67□□□□□ -0.7
VMP1-206ENST00000587945 ZNF414Q96IQ9 312 aa10.67□□□□□ -0.7
VMP1-206ENST00000587945 TMEM56Q96MV1 263 aa10.67□□□□□ -0.7
VMP1-206ENST00000587945 DAZ1Q9NQZ3 744 aaKnown RBP10.67□□□□□ -0.7
VMP1-206ENST00000587945 FKBP11Q9NYL4 201 aa10.67□□□□□ -0.7
VMP1-206ENST00000587945 TSPAN4O14817 238 aa10.66□□□□□ -0.7
VMP1-206ENST00000587945 JTBO76095 146 aa10.66□□□□□ -0.7
VMP1-206ENST00000587945 IGHV3-48P01763 117 aa10.66□□□□□ -0.7
VMP1-206ENST00000587945 S100GP29377 79 aa10.66□□□□□ -0.7
VMP1-206ENST00000587945 RCVRNP35243 200 aa10.66□□□□□ -0.7
VMP1-206ENST00000587945 MRGPRFQ96AM1 343 aa10.66□□□□□ -0.7
VMP1-206ENST00000587945 MISP3Q96FF7 219 aa10.66□□□□□ -0.7
VMP1-206ENST00000587945 SEC22AQ96IW7 307 aa10.66□□□□□ -0.7
VMP1-206ENST00000587945 TSC22D3Q99576 134 aa10.66□□□□□ -0.7
VMP1-206ENST00000587945 SPAG8Q99932 426 aaPredicted RBP10.66□□□□□ -0.7
VMP1-206ENST00000587945 SCPEP1Q9HB40 452 aa10.66□□□□□ -0.7
VMP1-206ENST00000587945 IGHV3-49A0A0A0MS15 119 aa10.65□□□□□ -0.7
VMP1-206ENST00000587945 CTSGP08311 255 aa10.65□□□□□ -0.7
VMP1-206ENST00000587945 IZUMO4Q1ZYL8 232 aa10.65□□□□□ -0.7
VMP1-206ENST00000587945 ODF3L2Q3SX64 289 aa10.65□□□□□ -0.7
VMP1-206ENST00000587945 SPINK9Q5DT21 86 aa10.65□□□□□ -0.7
VMP1-206ENST00000587945 LAMTOR1Q6IAA8 161 aa10.65□□□□□ -0.7
VMP1-206ENST00000587945 LPCAT3Q6P1A2 487 aa10.65□□□□□ -0.7
VMP1-206ENST00000587945 H2BFWTQ7Z2G1 175 aa10.65□□□□□ -0.7
VMP1-206ENST00000587945 OR1P1Q8NH06 330 aa10.65□□□□□ -0.7
VMP1-206ENST00000587945 OR4A16Q8NH70 328 aa10.65□□□□□ -0.7
VMP1-206ENST00000587945 CMTM3Q96MX0 182 aa10.65□□□□□ -0.7
VMP1-206ENST00000587945 I3L2K1 104 aa10.64□□□□□ -0.71
VMP1-206ENST00000587945 K7EMT4 169 aa10.64□□□□□ -0.71
VMP1-206ENST00000587945 YIF1AO95070 293 aa10.64□□□□□ -0.71
VMP1-206ENST00000587945 CTSDP07339 412 aaPredicted RBP10.64□□□□□ -0.71
VMP1-206ENST00000587945 PI3P19957 117 aa10.64□□□□□ -0.71
VMP1-206ENST00000587945 UCP3P55916 312 aa10.64□□□□□ -0.71
VMP1-206ENST00000587945 EWSR1Q01844 656 aaKnown RBP eCLIP10.64□□□□□ -0.71
VMP1-206ENST00000587945 ATP6V0BQ99437 205 aa10.64□□□□□ -0.71
VMP1-206ENST00000587945 NAA50Q9GZZ1 169 aaKnown RBP10.64□□□□□ -0.71
VMP1-206ENST00000587945 FAM212BQ9NTI7 297 aaPredicted RBP10.64□□□□□ -0.71
VMP1-206ENST00000587945 SMPXQ9UHP9 88 aa10.64□□□□□ -0.71
VMP1-206ENST00000587945 A0A0J9YWU9 116 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 C15orf62A8K5M9 175 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 FAM25AB3EWG3 89 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 FAM25CB3EWG5 89 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 FAM25GB3EWG6 89 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 NUPL2O15504 423 aaKnown RBP10.63□□□□□ -0.71
VMP1-206ENST00000587945 MT-CO2P00403 227 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 PGAM2P15259 253 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 RPL35AP18077 110 aaKnown RBP10.63□□□□□ -0.71
VMP1-206ENST00000587945 RORCP51449 518 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 APOC4P55056 127 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 MFAP4P55083 255 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 PRCDQ00LT1 54 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 PMS2P11Q13670 270 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 DEFB135Q30KP9 77 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 PINX1Q96BK5 328 aaKnown RBP10.63□□□□□ -0.71
VMP1-206ENST00000587945 RNF2Q99496 336 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 KLK11Q9UBX7 282 aa10.63□□□□□ -0.71
VMP1-206ENST00000587945 IGKV3-7A0A075B6H7 116 aa10.62□□□□□ -0.71
VMP1-206ENST00000587945 IGHV3OR16-13A0A075B7E8 117 aa10.62□□□□□ -0.71
VMP1-206ENST00000587945 IGHV3-74A0A0B4J1X5 117 aa10.62□□□□□ -0.71
VMP1-206ENST00000587945 IGHV7-4-1A0A0J9YVY3 117 aa10.62□□□□□ -0.71
VMP1-206ENST00000587945 OR4C46A6NHA9 309 aa10.62□□□□□ -0.71
VMP1-206ENST00000587945 CHEK1O14757 476 aa10.62□□□□□ -0.71
VMP1-206ENST00000587945 SPRY2O43597 315 aa10.62□□□□□ -0.71
VMP1-206ENST00000587945 TFPI2P48307 235 aa10.62□□□□□ -0.71
VMP1-206ENST00000587945 HSPE1P61604 102 aaKnown RBP10.62□□□□□ -0.71
VMP1-206ENST00000587945 APRG1Q8IVJ8 170 aa10.62□□□□□ -0.71
VMP1-206ENST00000587945 OR52I2Q8NH67 350 aa10.62□□□□□ -0.71
VMP1-206ENST00000587945 RHPN1-AS1Q9BWJ2 59 aa10.62□□□□□ -0.71
VMP1-206ENST00000587945 IGKV1-5P01602 117 aa10.61□□□□□ -0.71
VMP1-206ENST00000587945 CD3DP04234 171 aa10.61□□□□□ -0.71
VMP1-206ENST00000587945 FCGR2BP31994 310 aaPredicted RBP10.61□□□□□ -0.71
VMP1-206ENST00000587945 PIGPP57054 158 aa10.61□□□□□ -0.71
VMP1-206ENST00000587945 ERHP84090 104 aaKnown RBP10.61□□□□□ -0.71
VMP1-206ENST00000587945 RELQ04864 619 aaPredicted RBP10.61□□□□□ -0.71
VMP1-206ENST00000587945 ZNF124Q15973 351 aa10.61□□□□□ -0.71
VMP1-206ENST00000587945 MZT2AQ6P582 158 aa10.61□□□□□ -0.71
VMP1-206ENST00000587945 Q6ZWC4 215 aa10.61□□□□□ -0.71
VMP1-206ENST00000587945 LYG2Q86SG7 212 aa10.61□□□□□ -0.71
VMP1-206ENST00000587945 ZNF114Q8NC26 417 aa10.61□□□□□ -0.71
VMP1-206ENST00000587945 TMEM116Q8NCL8 245 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms