RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 SIGLEC9Q9Y336 463 aa8.13□□□□□ -1.11
APOC1-201ENST00000586638 AUP1Q9Y679 476 aa8.13□□□□□ -1.11
APOC1-201ENST00000586638 SONP18583 2426 aaKnown RBP8.13□□□□□ -1.11
APOC1-201ENST00000586638 TRAV20A0A0B4J274 112 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 IGHV1-69DA0A0B4J2H0 117 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 B4DSR2 109 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 PRSS46E5RG02 174 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 FGF16O43320 207 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 LY86O95711 162 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 MOSP00540 346 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 IFNA5P01569 189 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 IGHV1-69P01742 117 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 IGHV4-38-2P0DP08 117 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 RNASE2P10153 161 aaKnown RBP8.12□□□□□ -1.11
APOC1-201ENST00000586638 FGF7P21781 194 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 RPL27AP46776 148 aaKnown RBP8.12□□□□□ -1.11
APOC1-201ENST00000586638 SULT1A2P50226 295 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 RPP30P78346 268 aaKnown RBP8.12□□□□□ -1.11
APOC1-201ENST00000586638 PRSS8Q16651 343 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 EIF5AL1Q6IS14 154 aaKnown RBP8.12□□□□□ -1.11
APOC1-201ENST00000586638 BRD3OSQ6XYD6 125 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 ETV3LQ6ZN32 361 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 MMD2Q8IY49 270 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 OR10P1Q8NGE3 313 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 PINX1Q96BK5 328 aaKnown RBP8.12□□□□□ -1.11
APOC1-201ENST00000586638 RSG1Q9BU20 258 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 NDUFA4L2Q9NRX3 87 aa8.12□□□□□ -1.11
APOC1-201ENST00000586638 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.12□□□□□ -1.11
APOC1-201ENST00000586638 PKD1L1Q8TDX9 2849 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 A0A1W2PN81 502 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 SMCO3A2RU48 225 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 ZNF705EA8MWA4 302 aaPredicted RBP8.11□□□□□ -1.11
APOC1-201ENST00000586638 NDUFA3O95167 84 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 IFNA4P05014 189 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 REG1AP05451 166 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 SEC11BP0C7V7 166 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 APELAP0DMC3 54 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 IGHV4-31P0DP07 118 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 TMEM11P17152 192 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 CHRNA7P36544 502 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 RAB11AP62491 216 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 SSBP2P81877 361 aaPredicted RBP8.11□□□□□ -1.11
APOC1-201ENST00000586638 TUSC1Q2TAM9 212 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 LRRC75BQ2VPJ9 315 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 Q6ZRG5 221 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 C19orf35Q6ZS72 473 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 Q8N6K4 173 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 LINC01356Q8N9X3 169 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 OR2G3Q8NGZ4 309 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 OR2T10Q8NGZ9 312 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 SCGB1C1Q8TD33 95 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 RNF141Q8WVD5 230 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 MALSU1Q96EH3 234 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 RNF5Q99942 180 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 WDR61Q9GZS3 305 aaKnown RBP8.11□□□□□ -1.11
APOC1-201ENST00000586638 C7orf69Q9H7B7 122 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 UQCC1Q9NVA1 299 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 KIAA1456Q9P272 454 aa8.11□□□□□ -1.11
APOC1-201ENST00000586638 SOX21Q9Y651 276 aaPredicted RBP8.11□□□□□ -1.11
APOC1-201ENST00000586638 ABCA1O95477 2261 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 A0A0U1RQK1 487 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 FCN1O00602 326 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 SCAF4O95104 1147 aaKnown RBP8.1□□□□□ -1.11
APOC1-201ENST00000586638 AVPP01185 164 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 SRD5A1P18405 259 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 MAS1LP35410 378 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 COMPP49747 757 aaPredicted RBP8.1□□□□□ -1.11
APOC1-201ENST00000586638 ELLP55199 621 aaPredicted RBP8.1□□□□□ -1.11
APOC1-201ENST00000586638 DLK1P80370 383 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 SRSF2Q01130 221 aaKnown RBP8.1□□□□□ -1.11
APOC1-201ENST00000586638 WT1-ASQ06250 92 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 ATP6V1FQ16864 119 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 VWC2Q2TAL6 325 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 PPP1R27Q86WC6 154 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 NPBQ8NG41 125 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 TAF15Q92804 592 aaKnown RBP eCLIP8.1□□□□□ -1.11
APOC1-201ENST00000586638 GNPNAT1Q96EK6 184 aaPredicted RBP8.1□□□□□ -1.11
APOC1-201ENST00000586638 CITED4Q96RK1 184 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 PARD6GQ9BYG4 376 aaPredicted RBP8.1□□□□□ -1.11
APOC1-201ENST00000586638 PFDN2Q9UHV9 154 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 ANK2Q01484 3957 aa8.1□□□□□ -1.11
APOC1-201ENST00000586638 IGLC7A0M8Q6 106 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 TEX22C9J3V5 150 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 ACTL6BO94805 426 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 PRH1P02810 166 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 OR13C7P0DN81 318 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 AREGP15514 252 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 CAMLGP49069 296 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 FHITP49789 147 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 ERHP84090 104 aaKnown RBP8.09□□□□□ -1.11
APOC1-201ENST00000586638 EBI3Q14213 229 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 C5orf64Q2M2E5 130 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 BSXQ3C1V8 233 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 C2orf83Q53S99 150 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 ARSJQ5FYB0 599 aaPredicted RBP8.09□□□□□ -1.11
APOC1-201ENST00000586638 KLF17Q5JT82 389 aaPredicted RBP8.09□□□□□ -1.11
APOC1-201ENST00000586638 PXDC1Q5TGL8 231 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 FAM213BQ8TBF2 198 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 LRRC20Q8TCA0 184 aa8.09□□□□□ -1.11
APOC1-201ENST00000586638 ABHD5Q8WTS1 349 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms