RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PKHD1P08F94 4074 aa8.64□□□□□ -1.03
BRCA1-225ENST00000586385 DYNC1H1Q14204 4646 aaKnown RBP8.64□□□□□ -1.03
BRCA1-225ENST00000586385 DNAH17Q9UFH2 4485 aa8.64□□□□□ -1.03
BRCA1-225ENST00000586385 TRAV18A0A075B6X5 111 aa8.64□□□□□ -1.03
BRCA1-225ENST00000586385 MARCH11A6NNE9 402 aa8.64□□□□□ -1.03
BRCA1-225ENST00000586385 I3L2K1 104 aa8.64□□□□□ -1.03
BRCA1-225ENST00000586385 IFNA4P05014 189 aa8.64□□□□□ -1.03
BRCA1-225ENST00000586385 CLEC2LP0C7M8 214 aa8.64□□□□□ -1.03
BRCA1-225ENST00000586385 RBMY1A1P0DJD3 496 aaKnown RBP8.64□□□□□ -1.03
BRCA1-225ENST00000586385 RBMY1CP0DJD4 496 aa8.64□□□□□ -1.03
BRCA1-225ENST00000586385 FGF9P31371 208 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-225ENST00000586385 ARPC4P59998 168 aa8.64□□□□□ -1.03
BRCA1-225ENST00000586385 CATR1Q13166 79 aa8.64□□□□□ -1.03
BRCA1-225ENST00000586385 RBMY1FQ15415 496 aaKnown RBP8.64□□□□□ -1.03
BRCA1-225ENST00000586385 SFXN4Q6P4A7 337 aa8.64□□□□□ -1.03
BRCA1-225ENST00000586385 GBGT1Q8N5D6 347 aa8.64□□□□□ -1.03
BRCA1-225ENST00000586385 GIMAP1Q8WWP7 306 aa8.64□□□□□ -1.03
BRCA1-225ENST00000586385 FCAMRQ8WWV6 532 aa8.64□□□□□ -1.03
BRCA1-225ENST00000586385 LSM10Q969L4 123 aaKnown RBP8.64□□□□□ -1.03
BRCA1-225ENST00000586385 RRP15Q9Y3B9 282 aaKnown RBP8.64□□□□□ -1.03
BRCA1-225ENST00000586385 IGLL5B9A064 214 aa8.63□□□□□ -1.03
BRCA1-225ENST00000586385 NUPL2O15504 423 aaKnown RBP8.63□□□□□ -1.03
BRCA1-225ENST00000586385 SCGNO76038 276 aa8.63□□□□□ -1.03
BRCA1-225ENST00000586385 CA1P00915 261 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-225ENST00000586385 APOHP02749 345 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-225ENST00000586385 TCTAP57738 103 aa8.63□□□□□ -1.03
BRCA1-225ENST00000586385 Q56UQ5 140 aa8.63□□□□□ -1.03
BRCA1-225ENST00000586385 AADACL3Q5VUY0 350 aa8.63□□□□□ -1.03
BRCA1-225ENST00000586385 HSD17B13Q7Z5P4 300 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-225ENST00000586385 TMEM17Q86X19 198 aa8.63□□□□□ -1.03
BRCA1-225ENST00000586385 DGCR14Q96DF8 476 aaKnown RBP8.63□□□□□ -1.03
BRCA1-225ENST00000586385 HINT2Q9BX68 163 aa8.63□□□□□ -1.03
BRCA1-225ENST00000586385 C6orf62Q9GZU0 229 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-225ENST00000586385 AUNIPQ9H7T9 357 aa8.63□□□□□ -1.03
BRCA1-225ENST00000586385 OR51B2Q9Y5P1 312 aa8.63□□□□□ -1.03
BRCA1-225ENST00000586385 CYB5BO43169 146 aa8.62□□□□□ -1.03
BRCA1-225ENST00000586385 PGLYRP1O75594 196 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-225ENST00000586385 IGHV3-48P01763 117 aa8.62□□□□□ -1.03
BRCA1-225ENST00000586385 F2RP25116 425 aa8.62□□□□□ -1.03
BRCA1-225ENST00000586385 G6PCP35575 357 aa8.62□□□□□ -1.03
BRCA1-225ENST00000586385 LPAR6P43657 344 aa8.62□□□□□ -1.03
BRCA1-225ENST00000586385 LEMD1Q68G75 181 aa8.62□□□□□ -1.03
BRCA1-225ENST00000586385 CADM3Q8N126 398 aa8.62□□□□□ -1.03
BRCA1-225ENST00000586385 OR5AP2Q8NGF4 316 aa8.62□□□□□ -1.03
BRCA1-225ENST00000586385 OR1P1Q8NH06 330 aa8.62□□□□□ -1.03
BRCA1-225ENST00000586385 ST8SIA2Q92186 375 aa8.62□□□□□ -1.03
BRCA1-225ENST00000586385 NXF2Q9GZY0 626 aaKnown RBP8.62□□□□□ -1.03
BRCA1-225ENST00000586385 RNF167Q9H6Y7 350 aa8.62□□□□□ -1.03
BRCA1-225ENST00000586385 VSIRQ9H7M9 311 aa8.62□□□□□ -1.03
BRCA1-225ENST00000586385 DNAH11Q96DT5 4516 aa8.62□□□□□ -1.03
BRCA1-225ENST00000586385 IGHV4-28A0A0C4DH34 117 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 MEIS3P1A6NDR6 274 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 C15orf61A6NNL5 157 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 XRCC3O43542 346 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 KRASP01116 189 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 RLN1P04808 185 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 SDC2P34741 201 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 CMC4P56277 68 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-225ENST00000586385 DEFB131AP59861 70 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 RELQ04864 619 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-225ENST00000586385 TMEM187Q14656 261 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 UBE2UQ5VVX9 321 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 TCF24Q7RTU0 167 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 TPRA1Q86W33 373 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 SLC25A46Q96AG3 418 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 KRTAP4-5Q9BYR2 181 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 HRH4Q9H3N8 390 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 TMEM14BQ9NUH8 114 aa8.61□□□□□ -1.03
BRCA1-225ENST00000586385 ABCA13Q86UQ4 5058 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 ELOA3CA0A087WX78 387 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-225ENST00000586385 TRAV14DV4A0A0A6YYC5 116 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 IGHV3-66A0A0C4DH42 116 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 RTL8CO15255 209 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 MRPS14O60783 128 aaKnown RBP8.6□□□□□ -1.03
BRCA1-225ENST00000586385 DFFBO76075 338 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 YIF1AO95070 293 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 MT-CO2P00403 227 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 C4BPBP20851 252 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 HLA-DMBP28068 263 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 MFAP4P55083 255 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 ERVK-16P61578 105 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 DHRS11Q6UWP2 260 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 TOMM20LQ6UXN7 152 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 Q6ZTC4 211 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 MOB3AQ96BX8 217 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 CNBD2Q96M20 576 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 SCRT1Q9BWW7 348 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 FXYD6Q9H0Q3 95 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 MS4A6AQ9H2W1 248 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 ZFAND3Q9H8U3 227 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 ANAPC10Q9UM13 185 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 X6R8D5 127 aa8.6□□□□□ -1.03
BRCA1-225ENST00000586385 IGHV4-4A0A075B6R2 117 aa8.59□□□□□ -1.03
BRCA1-225ENST00000586385 C11orf94C9JXX5 98 aa8.59□□□□□ -1.03
BRCA1-225ENST00000586385 IGKV1-39P01597 117 aa8.59□□□□□ -1.03
BRCA1-225ENST00000586385 IGKV1D-39P04432 117 aa8.59□□□□□ -1.03
BRCA1-225ENST00000586385 RFX2P48378 723 aa8.59□□□□□ -1.03
BRCA1-225ENST00000586385 MXD1Q05195 221 aa8.59□□□□□ -1.03
BRCA1-225ENST00000586385 LINC00336Q6ZUF6 198 aa8.59□□□□□ -1.03
BRCA1-225ENST00000586385 TRPT1Q86TN4 253 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms