RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 LRRC75BQ2VPJ9 315 aa11.12□□□□□ -0.63
UBBP4-202ENST00000584755 ZNF562Q6V9R5 426 aa11.12□□□□□ -0.63
UBBP4-202ENST00000584755 C9orf139Q6ZV77 190 aa11.12□□□□□ -0.63
UBBP4-202ENST00000584755 FAM96BQ9Y3D0 163 aa11.12□□□□□ -0.63
UBBP4-202ENST00000584755 SOX21Q9Y651 276 aaPredicted RBP11.12□□□□□ -0.63
UBBP4-202ENST00000584755 PLXNB1O43157 2135 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 NCBP2LA6PVI3 153 aaKnown RBP11.11□□□□□ -0.63
UBBP4-202ENST00000584755 FGF16O43320 207 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 HLA-DRB1P01911 266 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 IFNA4P05014 189 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 OR13C7P0DN81 318 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 ATP6V0CP27449 155 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 SNCAP37840 140 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 GNB1P62873 340 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 NDUFA5Q16718 116 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 FAM74A1Q5RGS3 127 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 HSD17B11Q8NBQ5 300 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 NANPQ8TBE9 248 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 GNPNAT1Q96EK6 184 aaPredicted RBP11.11□□□□□ -0.63
UBBP4-202ENST00000584755 RBM14Q96PK6 669 aaKnown RBP11.11□□□□□ -0.63
UBBP4-202ENST00000584755 SSX3Q99909 188 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 WDR61Q9GZS3 305 aaKnown RBP11.11□□□□□ -0.63
UBBP4-202ENST00000584755 UQCC1Q9NVA1 299 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 PLA2G2EQ9NZK7 142 aa11.11□□□□□ -0.63
UBBP4-202ENST00000584755 ABCA1O95477 2261 aa11.1□□□□□ -0.63
UBBP4-202ENST00000584755 FBXO24O75426 580 aa11.1□□□□□ -0.63
UBBP4-202ENST00000584755 SULT1A2P50226 295 aa11.1□□□□□ -0.63
UBBP4-202ENST00000584755 RAB14P61106 215 aa11.1□□□□□ -0.63
UBBP4-202ENST00000584755 TUSC1Q2TAM9 212 aa11.1□□□□□ -0.63
UBBP4-202ENST00000584755 CENPVQ7Z7K6 275 aaPredicted RBP11.1□□□□□ -0.63
UBBP4-202ENST00000584755 LRRC20Q8TCA0 184 aa11.1□□□□□ -0.63
UBBP4-202ENST00000584755 P2RX4Q99571 388 aa11.1□□□□□ -0.63
UBBP4-202ENST00000584755 SH3BGRL3Q9H299 93 aa11.1□□□□□ -0.63
UBBP4-202ENST00000584755 NAV3Q8IVL0 2385 aa11.1□□□□□ -0.63
UBBP4-202ENST00000584755 SUB1P53999 127 aaKnown RBP eCLIP11.09□□□□□ -0.63
UBBP4-202ENST00000584755 CX3CL1P78423 397 aa11.09□□□□□ -0.63
UBBP4-202ENST00000584755 FXYD3Q14802 87 aa11.09□□□□□ -0.63
UBBP4-202ENST00000584755 SCGB1C1Q8TD33 95 aa11.09□□□□□ -0.63
UBBP4-202ENST00000584755 RNASEH2CQ8TDP1 164 aaKnown RBP11.09□□□□□ -0.63
UBBP4-202ENST00000584755 RNF141Q8WVD5 230 aa11.09□□□□□ -0.63
UBBP4-202ENST00000584755 TAF15Q92804 592 aaKnown RBP eCLIP11.09□□□□□ -0.63
UBBP4-202ENST00000584755 PSMG3Q9BT73 122 aaPredicted RBP11.09□□□□□ -0.63
UBBP4-202ENST00000584755 CSPG4Q6UVK1 2322 aa11.09□□□□□ -0.63
UBBP4-202ENST00000584755 CELSR1Q9NYQ6 3014 aa11.09□□□□□ -0.63
UBBP4-202ENST00000584755 IGHV7-81A0A0B4J1V7 117 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 UBE2L5PA0A1B0GUS4 154 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 LINC00862A6NCI5 91 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 A6NDX4 124 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 CNIH1O95406 144 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 AREGP15514 252 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 GPX4P36969 197 aaPredicted RBP11.08□□□□□ -0.64
UBBP4-202ENST00000584755 NDPQ00604 133 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 RUNX1Q01196 453 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 KRTAP1-1Q07627 177 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 ARSJQ5FYB0 599 aaPredicted RBP11.08□□□□□ -0.64
UBBP4-202ENST00000584755 C5orf56Q8N8D9 126 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 OR1P1Q8NH06 330 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 SSMEM1Q8WWF3 244 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 ARPC1AQ92747 370 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 RASL11BQ9BPW5 248 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 SLC25A33Q9BSK2 321 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 WDR83OSQ9Y284 106 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 MOB4Q9Y3A3 225 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 TIMM9Q9Y5J7 89 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 FLNAP21333 2647 aaKnown RBP11.08□□□□□ -0.64
UBBP4-202ENST00000584755 TEX15Q9BXT5 2789 aa11.08□□□□□ -0.64
UBBP4-202ENST00000584755 CTRB1P17538 263 aa11.07□□□□□ -0.64
UBBP4-202ENST00000584755 RAB5CP51148 216 aa11.07□□□□□ -0.64
UBBP4-202ENST00000584755 CD69Q07108 199 aa11.07□□□□□ -0.64
UBBP4-202ENST00000584755 CTRB2Q6GPI1 263 aa11.07□□□□□ -0.64
UBBP4-202ENST00000584755 SLC25A24Q6NUK1 477 aa11.07□□□□□ -0.64
UBBP4-202ENST00000584755 TREML4Q6UXN2 200 aa11.07□□□□□ -0.64
UBBP4-202ENST00000584755 BCL6BQ8N143 479 aaPredicted RBP11.07□□□□□ -0.64
UBBP4-202ENST00000584755 TEX29Q8N6K0 151 aa11.07□□□□□ -0.64
UBBP4-202ENST00000584755 PCNPQ8WW12 178 aaKnown RBP11.07□□□□□ -0.64
UBBP4-202ENST00000584755 CACNG8Q8WXS5 425 aa11.07□□□□□ -0.64
UBBP4-202ENST00000584755 PRDM13Q9H4Q3 707 aa11.07□□□□□ -0.64
UBBP4-202ENST00000584755 LSM4Q9Y4Z0 139 aaKnown RBP11.07□□□□□ -0.64
UBBP4-202ENST00000584755 F11RQ9Y624 299 aaKnown RBP11.07□□□□□ -0.64
UBBP4-202ENST00000584755 UMAD1C9J7I0 102 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 H3BUX3 64 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 SMAD7O15105 426 aaKnown RBP11.06□□□□□ -0.64
UBBP4-202ENST00000584755 MPDU1O75352 247 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 AMY1AP04745 511 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 REG1AP05451 166 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 CRYGCP07315 174 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 EGR2P11161 476 aaPredicted RBP11.06□□□□□ -0.64
UBBP4-202ENST00000584755 MFAP2P55001 183 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 DEFB112Q30KQ8 113 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 ASPHD1Q5U4P2 390 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 C16orf82Q7Z2V1 217 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 OR2G3Q8NGZ4 309 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 SAT2Q96F10 170 aaPredicted RBP11.06□□□□□ -0.64
UBBP4-202ENST00000584755 RSG1Q9BU20 258 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 NPVFQ9HCQ7 196 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 MED9Q9NWA0 146 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 PITPNC1Q9UKF7 332 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 RFNGQ9Y644 331 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 NPIPB5A8MRT5 1133 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 TRIM77I1YAP6 450 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms