RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 BCL6BQ8N143 479 aaPredicted RBP7.31□□□□□ -1.24
CASC3-209ENST00000583902 KCNRGQ8N5I3 272 aa7.31□□□□□ -1.24
CASC3-209ENST00000583902 TTC9CQ8N5M4 171 aa7.31□□□□□ -1.24
CASC3-209ENST00000583902 TMEM252Q8N6L7 170 aa7.31□□□□□ -1.24
CASC3-209ENST00000583902 OR10P1Q8NGE3 313 aa7.31□□□□□ -1.24
CASC3-209ENST00000583902 PARD6GQ9BYG4 376 aaPredicted RBP7.31□□□□□ -1.24
CASC3-209ENST00000583902 PRSS22Q9GZN4 317 aa7.31□□□□□ -1.24
CASC3-209ENST00000583902 ZC4H2Q9NQZ6 224 aa7.31□□□□□ -1.24
CASC3-209ENST00000583902 F8P00451 2351 aa7.31□□□□□ -1.24
CASC3-209ENST00000583902 CSMD2Q7Z408 3487 aa7.31□□□□□ -1.24
CASC3-209ENST00000583902 BORCS7-ASMTA0A0B4J1R7 106 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 IGLC7A0M8Q6 106 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 MSGN1A6NI15 193 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 TRIM77I1YAP6 450 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 MPDU1O75352 247 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 SCGB2A1O75556 95 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 JTBO76095 146 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 OR8U8P0C7N1 319 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 OR13C7P0DN81 318 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 HKR1P10072 659 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 CD24P25063 80 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 CNTFRP26992 372 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 PAX9P55771 341 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 HILS1P60008 231 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 SPANXN5Q5MJ07 72 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 EIF5AL1Q6IS14 154 aaKnown RBP7.3□□□□□ -1.24
CASC3-209ENST00000583902 Q8N2B8 174 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 COMMD1Q8N668 190 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 SIGLECL1Q8N7X8 197 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 OR11H4Q8NGC9 324 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 OR1S2Q8NGQ3 325 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 ZNF48Q96MX3 618 aaPredicted RBP7.3□□□□□ -1.24
CASC3-209ENST00000583902 HINT2Q9BX68 163 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 MAGT1Q9H0U3 335 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 GAR1Q9NY12 217 aaKnown RBP7.3□□□□□ -1.24
CASC3-209ENST00000583902 OR5AC2Q9NZP5 309 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 HSPB11Q9Y547 144 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 ZANQ9Y493 2812 aa7.3□□□□□ -1.24
CASC3-209ENST00000583902 MTORP42345 2549 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 TEX22C9J3V5 150 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 FCN1O00602 326 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 HOXA3O43365 443 aaPredicted RBP7.29□□□□□ -1.24
CASC3-209ENST00000583902 CRLF1O75462 422 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 IGHV4-59P01825 116 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 CRYBA1P05813 215 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 RNASE1P07998 156 aaKnown RBP7.29□□□□□ -1.24
CASC3-209ENST00000583902 CTRB1P17538 263 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 GNB1P62873 340 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 DLK1P80370 383 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 Q5BKY6 102 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 CTRB2Q6GPI1 263 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 SLC35E3Q7Z769 313 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 C9orf62Q8N4C0 152 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 ABHD5Q8WTS1 349 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 C22orf15Q8WYQ4 148 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 ARPC5LQ9BPX5 153 aa7.29□□□□□ -1.24
CASC3-209ENST00000583902 F11RQ9Y624 299 aaKnown RBP7.29□□□□□ -1.24
CASC3-209ENST00000583902 RNF222A6NCQ9 220 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 BCL2L11O43521 198 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 TMEM50AO95807 157 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 AMY1AP04745 511 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 IFNA4P05014 189 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 RNASE2P10153 161 aaKnown RBP7.28□□□□□ -1.24
CASC3-209ENST00000583902 IAPPP10997 89 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 DEFA4P12838 97 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 SLC35B1P78383 322 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 SSBP2P81877 361 aaPredicted RBP7.28□□□□□ -1.24
CASC3-209ENST00000583902 EWSR1Q01844 656 aaKnown RBP eCLIP7.28□□□□□ -1.24
CASC3-209ENST00000583902 WT1-ASQ06250 92 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 CD300CQ08708 224 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 PJVKQ0ZLH3 352 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 RAB31Q13636 194 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 LY6EQ16553 131 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 LGALSLQ3ZCW2 172 aaPredicted RBP7.28□□□□□ -1.24
CASC3-209ENST00000583902 ETV3LQ6ZN32 361 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 TMUB2Q71RG4 321 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 SLC51BQ86UW2 128 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 TMEM219Q86XT9 240 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 FAM110DQ8TAY7 271 aaPredicted RBP7.28□□□□□ -1.24
CASC3-209ENST00000583902 PHYHIPLQ96FC7 376 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 TXN2Q99757 166 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 ARL6Q9H0F7 186 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 SLA2Q9H6Q3 261 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 TPSG1Q9NRR2 321 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 KCNIP2Q9NS61 270 aa7.28□□□□□ -1.24
CASC3-209ENST00000583902 TRAV41A0A0B4J266 112 aa7.27□□□□□ -1.25
CASC3-209ENST00000583902 A0A1B0GUS0 222 aa7.27□□□□□ -1.25
CASC3-209ENST00000583902 FAM24AA6NFZ4 105 aa7.27□□□□□ -1.25
CASC3-209ENST00000583902 CGB1A6NKQ9 187 aa7.27□□□□□ -1.25
CASC3-209ENST00000583902 C15orf62A8K5M9 175 aa7.27□□□□□ -1.25
CASC3-209ENST00000583902 SMLR1H3BR10 107 aa7.27□□□□□ -1.25
CASC3-209ENST00000583902 TCF21O43680 179 aa7.27□□□□□ -1.25
CASC3-209ENST00000583902 FBXO24O75426 580 aa7.27□□□□□ -1.25
CASC3-209ENST00000583902 IFNA5P01569 189 aa7.27□□□□□ -1.25
CASC3-209ENST00000583902 FCGR2BP31994 310 aaPredicted RBP7.27□□□□□ -1.25
CASC3-209ENST00000583902 VWC2Q2TAL6 325 aa7.27□□□□□ -1.25
CASC3-209ENST00000583902 UNQ5815/PRO19632Q6UWF5 114 aa7.27□□□□□ -1.25
CASC3-209ENST00000583902 LILRB2Q8N423 598 aa7.27□□□□□ -1.25
CASC3-209ENST00000583902 UBAC2Q8NBM4 344 aa7.27□□□□□ -1.25
CASC3-209ENST00000583902 GRPEL2Q8TAA5 225 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms