RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 CXorf58Q96LI9 332 aa13.96□□□□□ -0.17
TOP2A-205ENST00000581055 PLEKHA3Q9HB20 300 aa13.96□□□□□ -0.17
TOP2A-205ENST00000581055 TNCP24821 2201 aa13.95□□□□□ -0.18
TOP2A-205ENST00000581055 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.95□□□□□ -0.18
TOP2A-205ENST00000581055 SEC14L6B5MCN3 397 aa13.95□□□□□ -0.18
TOP2A-205ENST00000581055 NDUFB8O95169 186 aa13.95□□□□□ -0.18
TOP2A-205ENST00000581055 IFNA17P01571 189 aa13.95□□□□□ -0.18
TOP2A-205ENST00000581055 CCR6P51684 374 aa13.95□□□□□ -0.18
TOP2A-205ENST00000581055 TATDN3Q17R31 274 aa13.95□□□□□ -0.18
TOP2A-205ENST00000581055 LGI3Q8N145 548 aa13.95□□□□□ -0.18
TOP2A-205ENST00000581055 CENPSQ8N2Z9 138 aa13.95□□□□□ -0.18
TOP2A-205ENST00000581055 LHFPL5Q8TAF8 219 aa13.95□□□□□ -0.18
TOP2A-205ENST00000581055 DLX4Q92988 240 aaPredicted RBP13.95□□□□□ -0.18
TOP2A-205ENST00000581055 EEF1AKMT3Q96AZ1 226 aa13.95□□□□□ -0.18
TOP2A-205ENST00000581055 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.95□□□□□ -0.18
TOP2A-205ENST00000581055 CACFD1Q9UGQ2 172 aa13.95□□□□□ -0.18
TOP2A-205ENST00000581055 F11RQ9Y624 299 aaKnown RBP13.95□□□□□ -0.18
TOP2A-205ENST00000581055 NDUFB6O95139 128 aa13.94□□□□□ -0.18
TOP2A-205ENST00000581055 VAMP1P23763 118 aa13.94□□□□□ -0.18
TOP2A-205ENST00000581055 INSL3P51460 131 aa13.94□□□□□ -0.18
TOP2A-205ENST00000581055 SUPT4H1P63272 117 aaKnown RBP13.94□□□□□ -0.18
TOP2A-205ENST00000581055 ERHP84090 104 aaKnown RBP13.94□□□□□ -0.18
TOP2A-205ENST00000581055 SLC25A24Q6NUK1 477 aa13.94□□□□□ -0.18
TOP2A-205ENST00000581055 REC114Q7Z4M0 266 aa13.94□□□□□ -0.18
TOP2A-205ENST00000581055 SLC35G3Q8N808 338 aa13.94□□□□□ -0.18
TOP2A-205ENST00000581055 CMYA5Q8N3K9 4069 aa13.94□□□□□ -0.18
TOP2A-205ENST00000581055 TRBV7-1A0A0A6YYK4 115 aa13.93□□□□□ -0.18
TOP2A-205ENST00000581055 A0A0B4J2A0 478 aa13.93□□□□□ -0.18
TOP2A-205ENST00000581055 ST8SIA3O43173 380 aa13.93□□□□□ -0.18
TOP2A-205ENST00000581055 WIPF1O43516 503 aa13.93□□□□□ -0.18
TOP2A-205ENST00000581055 UBE2MP61081 183 aaKnown RBP13.93□□□□□ -0.18
TOP2A-205ENST00000581055 RPEL1Q2QD12 228 aa13.93□□□□□ -0.18
TOP2A-205ENST00000581055 OR2C3Q8N628 320 aa13.93□□□□□ -0.18
TOP2A-205ENST00000581055 OR1P1Q8NH06 330 aa13.93□□□□□ -0.18
TOP2A-205ENST00000581055 ELOVL1Q9BW60 279 aa13.93□□□□□ -0.18
TOP2A-205ENST00000581055 WDR12Q9GZL7 423 aaKnown RBP13.93□□□□□ -0.18
TOP2A-205ENST00000581055 ENY2Q9NPA8 101 aa13.93□□□□□ -0.18
TOP2A-205ENST00000581055 SHPKQ9UHJ6 478 aa13.93□□□□□ -0.18
TOP2A-205ENST00000581055 NOTCH3Q9UM47 2321 aa13.93□□□□□ -0.18
TOP2A-205ENST00000581055 A0A0G2JRQ6 117 aa13.92□□□□□ -0.18
TOP2A-205ENST00000581055 TRBV12-3P01733 135 aa13.92□□□□□ -0.18
TOP2A-205ENST00000581055 KLF5Q13887 457 aaPredicted RBP13.92□□□□□ -0.18
TOP2A-205ENST00000581055 OR52E5Q8NH55 327 aa13.92□□□□□ -0.18
TOP2A-205ENST00000581055 VN1R17PQ8TDU5 208 aa13.92□□□□□ -0.18
TOP2A-205ENST00000581055 GPR146Q96CH1 333 aa13.92□□□□□ -0.18
TOP2A-205ENST00000581055 CACNG5Q9UF02 275 aa13.92□□□□□ -0.18
TOP2A-205ENST00000581055 DUXBA0A1W2PPF3 345 aa13.91□□□□□ -0.18
TOP2A-205ENST00000581055 INS-IGF2F8WCM5 200 aa13.91□□□□□ -0.18
TOP2A-205ENST00000581055 LYRM1O43325 122 aa13.91□□□□□ -0.18
TOP2A-205ENST00000581055 SNCAP37840 140 aa13.91□□□□□ -0.18
TOP2A-205ENST00000581055 HOXA1P49639 335 aaPredicted RBP13.91□□□□□ -0.18
TOP2A-205ENST00000581055 SPCS3P61009 180 aa13.91□□□□□ -0.18
TOP2A-205ENST00000581055 EGFEM1PQ0D2K5 195 aa13.91□□□□□ -0.18
TOP2A-205ENST00000581055 ZNF846Q147U1 533 aa13.91□□□□□ -0.18
TOP2A-205ENST00000581055 AARDQ4LEZ3 155 aa13.91□□□□□ -0.18
TOP2A-205ENST00000581055 Q6ZRM9 215 aa13.91□□□□□ -0.18
TOP2A-205ENST00000581055 ZNF114Q8NC26 417 aa13.91□□□□□ -0.18
TOP2A-205ENST00000581055 PRR13Q9NZ81 148 aa13.91□□□□□ -0.18
TOP2A-205ENST00000581055 DMRT1Q9Y5R6 373 aa13.91□□□□□ -0.18
TOP2A-205ENST00000581055 BMPR1BO00238 502 aa13.9□□□□□ -0.18
TOP2A-205ENST00000581055 GGCTO75223 188 aaKnown RBP13.9□□□□□ -0.18
TOP2A-205ENST00000581055 SAP30O75446 220 aa13.9□□□□□ -0.18
TOP2A-205ENST00000581055 SFT2D2O95562 160 aa13.9□□□□□ -0.18
TOP2A-205ENST00000581055 SULT1A3P0DMM9 295 aa13.9□□□□□ -0.18
TOP2A-205ENST00000581055 SULT1A4P0DMN0 295 aa13.9□□□□□ -0.18
TOP2A-205ENST00000581055 SUB1P53999 127 aaKnown RBP eCLIP13.9□□□□□ -0.18
TOP2A-205ENST00000581055 PPP1R1AQ13522 171 aa13.9□□□□□ -0.18
TOP2A-205ENST00000581055 SPINK9Q5DT21 86 aa13.9□□□□□ -0.18
TOP2A-205ENST00000581055 ACSM6Q6P461 480 aa13.9□□□□□ -0.18
TOP2A-205ENST00000581055 CLEC19AQ6UXS0 136 aa13.9□□□□□ -0.18
TOP2A-205ENST00000581055 LYZL2Q7Z4W2 148 aa13.9□□□□□ -0.18
TOP2A-205ENST00000581055 OR4C12Q96R67 309 aa13.9□□□□□ -0.18
TOP2A-205ENST00000581055 MFSD2BA6NFX1 497 aa13.89□□□□□ -0.19
TOP2A-205ENST00000581055 PLA2G10O15496 165 aa13.89□□□□□ -0.19
TOP2A-205ENST00000581055 IGHV3-23P01764 117 aa13.89□□□□□ -0.19
TOP2A-205ENST00000581055 CLEC3BP05452 202 aa13.89□□□□□ -0.19
TOP2A-205ENST00000581055 BTCP35070 178 aa13.89□□□□□ -0.19
TOP2A-205ENST00000581055 ARL3P36405 182 aa13.89□□□□□ -0.19
TOP2A-205ENST00000581055 SYNJ2BPP57105 145 aa13.89□□□□□ -0.19
TOP2A-205ENST00000581055 LRTM2Q8N967 370 aa13.89□□□□□ -0.19
TOP2A-205ENST00000581055 ZNF502Q8TBZ5 544 aa13.89□□□□□ -0.19
TOP2A-205ENST00000581055 CCDC140Q96MF4 163 aa13.89□□□□□ -0.19
TOP2A-205ENST00000581055 ATP6V0BQ99437 205 aa13.89□□□□□ -0.19
TOP2A-205ENST00000581055 S4R3C0 116 aa13.89□□□□□ -0.19
TOP2A-205ENST00000581055 A0A1B0GU03 582 aa13.88□□□□□ -0.19
TOP2A-205ENST00000581055 PPP5D1E7EU14 171 aa13.88□□□□□ -0.19
TOP2A-205ENST00000581055 MFAP2P55001 183 aa13.88□□□□□ -0.19
TOP2A-205ENST00000581055 SMCO1Q147U7 214 aa13.88□□□□□ -0.19
TOP2A-205ENST00000581055 PDLIM3Q53GG5 364 aaPredicted RBP13.88□□□□□ -0.19
TOP2A-205ENST00000581055 NMSQ5H8A3 153 aa13.88□□□□□ -0.19
TOP2A-205ENST00000581055 OR9G4Q8NGQ1 327 aa13.88□□□□□ -0.19
TOP2A-205ENST00000581055 MISP3Q96FF7 219 aa13.88□□□□□ -0.19
TOP2A-205ENST00000581055 PEMTQ9UBM1 199 aa13.88□□□□□ -0.19
TOP2A-205ENST00000581055 FLVCR2Q9UPI3 526 aa13.88□□□□□ -0.19
TOP2A-205ENST00000581055 HLA-AP01891 365 aaKnown RBP13.87□□□□□ -0.19
TOP2A-205ENST00000581055 KRTAP10-11P60412 298 aa13.87□□□□□ -0.19
TOP2A-205ENST00000581055 ANKRD55Q3KP44 614 aa13.87□□□□□ -0.19
TOP2A-205ENST00000581055 MZT2BQ6NZ67 158 aa13.87□□□□□ -0.19
TOP2A-205ENST00000581055 SCARB1Q8WTV0 552 aa13.87□□□□□ -0.19
TOP2A-205ENST00000581055 GAR1Q9NY12 217 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms