RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 ADAMTSL5Q6ZMM2 481 aa12.62□□□□□ -0.39
SREBF1-219ENST00000580540 SGPP2Q8IWX5 399 aa12.62□□□□□ -0.39
SREBF1-219ENST00000580540 OR4C16Q8NGL9 310 aa12.62□□□□□ -0.39
SREBF1-219ENST00000580540 RNASE11Q8TAA1 199 aaKnown RBP12.62□□□□□ -0.39
SREBF1-219ENST00000580540 U3KQK5 164 aa12.62□□□□□ -0.39
SREBF1-219ENST00000580540 COL7A1Q02388 2944 aa12.62□□□□□ -0.39
SREBF1-219ENST00000580540 TEX13DA0A0J9YY54 714 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-219ENST00000580540 LGALS9O00182 355 aa12.61□□□□□ -0.39
SREBF1-219ENST00000580540 ATG12O94817 140 aa12.61□□□□□ -0.39
SREBF1-219ENST00000580540 HSPE1P61604 102 aaKnown RBP12.61□□□□□ -0.39
SREBF1-219ENST00000580540 CD300EQ496F6 205 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-219ENST00000580540 SPINK9Q5DT21 86 aa12.61□□□□□ -0.39
SREBF1-219ENST00000580540 SBSPONQ8IVN8 264 aa12.61□□□□□ -0.39
SREBF1-219ENST00000580540 Q8N1Y9 231 aa12.61□□□□□ -0.39
SREBF1-219ENST00000580540 UBAC2Q8NBM4 344 aa12.61□□□□□ -0.39
SREBF1-219ENST00000580540 VN1R17PQ8TDU5 208 aa12.61□□□□□ -0.39
SREBF1-219ENST00000580540 CACNG8Q8WXS5 425 aa12.61□□□□□ -0.39
SREBF1-219ENST00000580540 OR2T8A6NH00 312 aa12.6□□□□□ -0.39
SREBF1-219ENST00000580540 GSTZ1O43708 216 aaPredicted RBP12.6□□□□□ -0.39
SREBF1-219ENST00000580540 IGKV1-5P01602 117 aa12.6□□□□□ -0.39
SREBF1-219ENST00000580540 GUCA2BQ16661 112 aa12.6□□□□□ -0.39
SREBF1-219ENST00000580540 GTSCR1Q86UQ5 136 aa12.6□□□□□ -0.39
SREBF1-219ENST00000580540 OR51S1Q8NGJ8 323 aa12.6□□□□□ -0.39
SREBF1-219ENST00000580540 OR1L6Q8NGR2 347 aa12.6□□□□□ -0.39
SREBF1-219ENST00000580540 RRNAD1Q96FB5 475 aaKnown RBP12.6□□□□□ -0.39
SREBF1-219ENST00000580540 MISP3Q96FF7 219 aa12.6□□□□□ -0.39
SREBF1-219ENST00000580540 NXF2Q9GZY0 626 aaKnown RBP12.6□□□□□ -0.39
SREBF1-219ENST00000580540 PLEKHA3Q9HB20 300 aa12.6□□□□□ -0.39
SREBF1-219ENST00000580540 MCUBQ9NWR8 336 aa12.6□□□□□ -0.39
SREBF1-219ENST00000580540 C21orf62Q9NYP8 219 aa12.6□□□□□ -0.39
SREBF1-219ENST00000580540 ANKRD20A5PA0PJZ0 165 aa12.59□□□□□ -0.39
SREBF1-219ENST00000580540 TGOLN2O43493 480 aa12.59□□□□□ -0.39
SREBF1-219ENST00000580540 IFNA17P01571 189 aa12.59□□□□□ -0.39
SREBF1-219ENST00000580540 IGHV4-30-4P0DP06 118 aa12.59□□□□□ -0.39
SREBF1-219ENST00000580540 CBLN1P23435 193 aa12.59□□□□□ -0.39
SREBF1-219ENST00000580540 ERHP84090 104 aaKnown RBP12.59□□□□□ -0.39
SREBF1-219ENST00000580540 PRCDQ00LT1 54 aa12.59□□□□□ -0.39
SREBF1-219ENST00000580540 DEFB114Q30KQ6 69 aa12.59□□□□□ -0.39
SREBF1-219ENST00000580540 TM4SF20Q53R12 229 aa12.59□□□□□ -0.39
SREBF1-219ENST00000580540 PYDC2Q56P42 97 aa12.59□□□□□ -0.39
SREBF1-219ENST00000580540 Q56UQ5 140 aa12.59□□□□□ -0.39
SREBF1-219ENST00000580540 OR2C3Q8N628 320 aa12.59□□□□□ -0.39
SREBF1-219ENST00000580540 OR2K2Q8NGT1 345 aa12.59□□□□□ -0.39
SREBF1-219ENST00000580540 SCARB1Q8WTV0 552 aa12.59□□□□□ -0.39
SREBF1-219ENST00000580540 PRRT1Q99946 306 aa12.59□□□□□ -0.39
SREBF1-219ENST00000580540 RTBDNQ9BSG5 229 aaPredicted RBP12.59□□□□□ -0.39
SREBF1-219ENST00000580540 TMEM213A2RRL7 107 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 OR5AC1P0C628 307 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 UCP1P25874 307 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 S100A5P33763 92 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 UNQ9165/PRO28630Q6UXU0 137 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 SLC35G3Q8N808 338 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 UXS1Q8NBZ7 420 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 OR1P1Q8NH06 330 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 WWC2-AS2Q96NR7 200 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 SOSTQ9BQB4 213 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 THAP7Q9BT49 309 aaPredicted RBP12.58□□□□□ -0.4
SREBF1-219ENST00000580540 PDCD10Q9BUL8 212 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 C5orf66Q9H5L9 145 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 NAA60Q9H7X0 242 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 TUBA4BQ9H853 241 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 PALMDQ9NP74 551 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 TECRQ9NZ01 308 aaKnown RBP12.58□□□□□ -0.4
SREBF1-219ENST00000580540 SCP2D1Q9UJQ7 156 aa12.58□□□□□ -0.4
SREBF1-219ENST00000580540 A0A0B4J293 547 aa12.57□□□□□ -0.4
SREBF1-219ENST00000580540 K7EIM0 57 aa12.57□□□□□ -0.4
SREBF1-219ENST00000580540 ST8SIA3O43173 380 aa12.57□□□□□ -0.4
SREBF1-219ENST00000580540 CD81P60033 236 aa12.57□□□□□ -0.4
SREBF1-219ENST00000580540 SURF2Q15527 256 aaPredicted RBP12.57□□□□□ -0.4
SREBF1-219ENST00000580540 PINX1Q96BK5 328 aaKnown RBP12.57□□□□□ -0.4
SREBF1-219ENST00000580540 BSCL2Q96G97 398 aaPredicted RBP12.57□□□□□ -0.4
SREBF1-219ENST00000580540 TMEM222Q9H0R3 208 aa12.57□□□□□ -0.4
SREBF1-219ENST00000580540 GPR132Q9UNW8 380 aa12.57□□□□□ -0.4
SREBF1-219ENST00000580540 ZNF785A8K8V0 405 aa12.56□□□□□ -0.4
SREBF1-219ENST00000580540 B3GALNT1O75752 331 aa12.56□□□□□ -0.4
SREBF1-219ENST00000580540 IGHV3-48P01763 117 aa12.56□□□□□ -0.4
SREBF1-219ENST00000580540 P0C879 139 aa12.56□□□□□ -0.4
SREBF1-219ENST00000580540 SNCAP37840 140 aa12.56□□□□□ -0.4
SREBF1-219ENST00000580540 ETV6P41212 452 aa12.56□□□□□ -0.4
SREBF1-219ENST00000580540 ZNF57Q68EA5 555 aaPredicted RBP12.56□□□□□ -0.4
SREBF1-219ENST00000580540 WDR89Q96FK6 387 aaPredicted RBP12.56□□□□□ -0.4
SREBF1-219ENST00000580540 CHRDL1Q9BU40 450 aa12.56□□□□□ -0.4
SREBF1-219ENST00000580540 C20orf24Q9BUV8 137 aa12.56□□□□□ -0.4
SREBF1-219ENST00000580540 ENY2Q9NPA8 101 aa12.56□□□□□ -0.4
SREBF1-219ENST00000580540 SLC2A8Q9NY64 477 aa12.56□□□□□ -0.4
SREBF1-219ENST00000580540 UFC1Q9Y3C8 167 aa12.56□□□□□ -0.4
SREBF1-219ENST00000580540 HUWE1Q7Z6Z7 4374 aaKnown RBP12.55□□□□□ -0.4
SREBF1-219ENST00000580540 IGHV3OR16-8A0A075B7F1 116 aa12.55□□□□□ -0.4
SREBF1-219ENST00000580540 A0A0G2JRQ6 117 aa12.55□□□□□ -0.4
SREBF1-219ENST00000580540 A8MWP6 167 aa12.55□□□□□ -0.4
SREBF1-219ENST00000580540 MT-CO2P00403 227 aa12.55□□□□□ -0.4
SREBF1-219ENST00000580540 HOXA1P49639 335 aaPredicted RBP12.55□□□□□ -0.4
SREBF1-219ENST00000580540 MFAP4P55083 255 aa12.55□□□□□ -0.4
SREBF1-219ENST00000580540 DHODHQ02127 395 aa12.55□□□□□ -0.4
SREBF1-219ENST00000580540 SPSB3Q6PJ21 355 aa12.55□□□□□ -0.4
SREBF1-219ENST00000580540 BTNL8Q6UX41 500 aa12.55□□□□□ -0.4
SREBF1-219ENST00000580540 GLYATL2Q8WU03 294 aa12.55□□□□□ -0.4
SREBF1-219ENST00000580540 SCGB3A2Q96PL1 93 aa12.55□□□□□ -0.4
SREBF1-219ENST00000580540 NEURL2Q9BR09 285 aa12.55□□□□□ -0.4
SREBF1-219ENST00000580540 ZNF436Q9C0F3 470 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms