RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 SAA2-SAA4A0A096LPE2 208 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 OR9G9P0C7N8 305 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 P0C879 139 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 SAA2P0DJI9 122 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 ERVK-16P61578 105 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PKIAP61925 76 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 DNLZQ5SXM8 178 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 OR4A16Q8NH70 328 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 LINC00574Q9H8X3 128 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 SIRT7Q9NRC8 400 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 ONECUT1Q9UBC0 465 aa10.32□□□□□ -0.76
CDK5RAP3-217ENST00000580287 IGKV1D-33P01593 117 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 IGKV1-33P01594 117 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 TRGC1P0CF51 173 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 FABP4P15090 132 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 ZNF439Q8NDP4 499 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 FRZBQ92765 325 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 SSBP3Q9BWW4 388 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 WDR61Q9GZS3 305 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 CCDC168Q8NDH2 2452 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 ITPR2Q14571 2701 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 BTBD17A6NE02 478 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 HPRT1P00492 218 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 IGHV1-8P0DP01 117 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 MDKP21741 143 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 LRRC75BQ2VPJ9 315 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 ZNF506Q5JVG8 444 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 TMEM14EPQ6UXP3 125 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 OR10P1Q8NGE3 313 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 OR13D1Q8NGV5 346 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 ABHD5Q8WTS1 349 aa10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 TAF15Q92804 592 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDK5RAP3-217ENST00000580287 FSTL3O95633 263 aa10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 HSPB1P04792 205 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 COX7A1P24310 79 aa10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 GATAD1Q8WUU5 269 aa10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 RCC1LQ96I51 464 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 NIPSNAP3BQ9BS92 247 aa10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 RAB9BQ9NP90 201 aa10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 IGHV4-30-2A0A087WSY4 118 aa10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 A0A1W2PRD5 423 aa10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 A0A1W2PRF3 423 aa10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 A0A1W2PRM7 423 aa10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 HBE1P02100 147 aa10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 RAB7AP51149 207 aa10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 TAS2R60P59551 318 aa10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 CIB3Q96Q77 187 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 TXN2Q99757 166 aa10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 SSX3Q99909 188 aa10.3□□□□□ -0.76
CDK5RAP3-217ENST00000580287 LOC105371242A0A075B767 164 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 IGHV4-61A0A0C4DH41 118 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 TSTD3H0UI37 97 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 IFNA10P01566 189 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 FGF7P21781 194 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 LMO4P61968 165 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 SLC25A48Q6ZT89 311 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 SLC35E3Q7Z769 313 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 ABHD12Q8N2K0 398 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 FAM168AQ92567 244 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 FAM210BQ96KR6 192 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PSMG3-AS1Q96PY0 264 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 ABCA1O95477 2261 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 TRAV3A0A0B4J244 114 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 SMCO3A2RU48 225 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 CD81P60033 236 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 Q8N7P7 452 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 SLC25A22Q9H936 323 aa10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 HEYLQ9NQ87 328 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PDLIM4P50479 330 aa10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 KLRD1Q13241 179 aa10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 DPPA3Q6W0C5 159 aa10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 RPP25LQ8N5L8 163 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PINX1Q96BK5 328 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PACRGQ96M98 296 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PSMG3Q9BT73 122 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 TMEM140Q9NV12 185 aa10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PAX1P15863 534 aa10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 CLEC12BQ2HXU8 276 aa10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 MAPK1IP1LQ8NDC0 245 aa10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 LY6G5BQ8NDX9 201 aa10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 OR4S2Q8NH73 311 aa10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 HIST1H2BLQ99880 126 aa10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 TMEM147Q9BVK8 224 aa10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 HINT2Q9BX68 163 aa10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 ZNF469Q96JG9 3925 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-217ENST00000580287 J3QR06 171 aa10.27□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PHOX2AO14813 284 aa10.27□□□□□ -0.76
CDK5RAP3-217ENST00000580287 SERF2P84101 59 aa10.27□□□□□ -0.76
CDK5RAP3-217ENST00000580287 TMEM41BQ5BJD5 291 aa10.27□□□□□ -0.76
CDK5RAP3-217ENST00000580287 FAM90A2PQ658T7 463 aa10.27□□□□□ -0.76
CDK5RAP3-217ENST00000580287 ACSM6Q6P461 480 aa10.27□□□□□ -0.76
CDK5RAP3-217ENST00000580287 PNKDQ8N490 385 aa10.27□□□□□ -0.76
CDK5RAP3-217ENST00000580287 OR10X1Q8NGY0 326 aa10.27□□□□□ -0.76
CDK5RAP3-217ENST00000580287 TMEM133Q9H2Q1 129 aa10.27□□□□□ -0.76
CDK5RAP3-217ENST00000580287 UNC79Q9P2D8 2635 aa10.27□□□□□ -0.77
CDK5RAP3-217ENST00000580287 LOC102723971A0A1B0GUV8 181 aa10.27□□□□□ -0.77
CDK5RAP3-217ENST00000580287 LIPFP07098 398 aa10.27□□□□□ -0.77
CDK5RAP3-217ENST00000580287 GCSAMLQ5JQS6 135 aa10.27□□□□□ -0.77
CDK5RAP3-217ENST00000580287 ZNF709Q8N972 641 aa10.27□□□□□ -0.77
CDK5RAP3-217ENST00000580287 OR5R1Q8NH85 324 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms