RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 IGHV3-23P01764 117 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 CD69Q07108 199 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 SCN2AQ99250 2005 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 A0A087WV48 116 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 PPP1R17O96001 155 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 NEU1Q99519 415 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 IL36BQ9NZH7 164 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 A0A0B4J293 547 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 SRP19P09132 144 aaKnown RBP12.68□□□□□ -0.38
ITGB4-206ENST00000579662 ZNF56Q15929 161 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 SPATA45Q537H7 98 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 Q6AWC8 147 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 NUP37Q8NFH4 326 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 COPS9Q8WXC6 57 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 IGHV3-35A0A0C4DH35 117 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 ZNF98A6NK75 572 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 ASIPP42127 132 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 TAS2R60P59551 318 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 LRTM2Q8N967 370 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 NPFFR1Q9GZQ6 430 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 IGKV3-15P01624 115 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 ZNF385CQ66K41 422 aaPredicted RBP12.67□□□□□ -0.38
ITGB4-206ENST00000579662 SGK494Q96LW2 274 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 H7C1H1 209 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 PEMTQ9UBM1 199 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 DUTP33316 252 aaKnown RBP12.67□□□□□ -0.38
ITGB4-206ENST00000579662 PRCDQ00LT1 54 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 CIARTQ8N365 385 aaPredicted RBP12.67□□□□□ -0.38
ITGB4-206ENST00000579662 RAB37Q96AX2 223 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 CLEC19AQ6UXS0 136 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 COLCA1Q6ZS62 124 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 OTORQ9NRC9 128 aa12.67□□□□□ -0.38
ITGB4-206ENST00000579662 ABCA7Q8IZY2 2146 aa12.66□□□□□ -0.38
ITGB4-206ENST00000579662 CDX1P47902 265 aaPredicted RBP12.66□□□□□ -0.38
ITGB4-206ENST00000579662 ZNF418Q8TF45 676 aaPredicted RBP12.66□□□□□ -0.38
ITGB4-206ENST00000579662 SLC25A15Q9Y619 301 aa12.66□□□□□ -0.38
ITGB4-206ENST00000579662 FAM181BA6NEQ2 426 aa12.66□□□□□ -0.38
ITGB4-206ENST00000579662 RNF126Q9BV68 326 aa12.66□□□□□ -0.38
ITGB4-206ENST00000579662 IGKV1-12A0A0C4DH73 117 aa12.66□□□□□ -0.38
ITGB4-206ENST00000579662 IGKV1D-12P01611 117 aa12.66□□□□□ -0.38
ITGB4-206ENST00000579662 IGHG3P01860 377 aa12.66□□□□□ -0.38
ITGB4-206ENST00000579662 MIR17HGQ75NE6 70 aa12.66□□□□□ -0.38
ITGB4-206ENST00000579662 A0A087WWC5 75 aa12.66□□□□□ -0.38
ITGB4-206ENST00000579662 PAX1P15863 534 aa12.66□□□□□ -0.38
ITGB4-206ENST00000579662 COL5A1-AS1Q5SY13 56 aa12.66□□□□□ -0.38
ITGB4-206ENST00000579662 ERASQ7Z444 233 aa12.66□□□□□ -0.38
ITGB4-206ENST00000579662 TMEM190Q8WZ59 177 aa12.66□□□□□ -0.38
ITGB4-206ENST00000579662 FNDC1Q4ZHG4 1894 aaPredicted RBP12.65□□□□□ -0.38
ITGB4-206ENST00000579662 MBD3L4A6NDZ8 208 aaPredicted RBP12.65□□□□□ -0.38
ITGB4-206ENST00000579662 MBD3L3A6NE82 208 aaPredicted RBP12.65□□□□□ -0.38
ITGB4-206ENST00000579662 MBD3L5A6NJ08 208 aaPredicted RBP12.65□□□□□ -0.38
ITGB4-206ENST00000579662 CEACAM4O75871 244 aa12.65□□□□□ -0.38
ITGB4-206ENST00000579662 MBD3L2Q8NHZ7 208 aaPredicted RBP12.65□□□□□ -0.38
ITGB4-206ENST00000579662 PNRC2Q9NPJ4 139 aaKnown RBP12.65□□□□□ -0.38
ITGB4-206ENST00000579662 MYOD1P15172 320 aa12.65□□□□□ -0.38
ITGB4-206ENST00000579662 ID3Q02535 119 aa12.65□□□□□ -0.38
ITGB4-206ENST00000579662 BIVMQ86UB2 503 aa12.65□□□□□ -0.38
ITGB4-206ENST00000579662 TRBV20OR9-2A0A075B6H5 130 aa12.65□□□□□ -0.38
ITGB4-206ENST00000579662 B3GALT5-AS1P59052 145 aa12.65□□□□□ -0.38
ITGB4-206ENST00000579662 JMJD8Q96S16 334 aa12.65□□□□□ -0.38
ITGB4-206ENST00000579662 SLC50A1Q9BRV3 221 aa12.65□□□□□ -0.38
ITGB4-206ENST00000579662 LY6G6FQ5SQ64 297 aa12.65□□□□□ -0.38
ITGB4-206ENST00000579662 C12orf54Q6X4T0 127 aa12.65□□□□□ -0.38
ITGB4-206ENST00000579662 PRSS22Q9GZN4 317 aa12.65□□□□□ -0.38
ITGB4-206ENST00000579662 RPP21Q9H633 154 aaKnown RBP12.65□□□□□ -0.38
ITGB4-206ENST00000579662 SCO2A0A1W2PP80 73 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 NPFFO15130 113 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 OR4D5Q8NGN0 318 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 UQCR10Q9UDW1 63 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 VWA8A3KMH1 1905 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 LDLRAD4O15165 306 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 FOXG1P55316 489 aaPredicted RBP12.64□□□□□ -0.39
ITGB4-206ENST00000579662 FOXL2NBQ6ZUU3 175 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 Q9H3A6 140 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 RPUSD1Q9UJJ7 312 aaKnown RBP12.64□□□□□ -0.39
ITGB4-206ENST00000579662 CEP290O15078 2479 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 IGHV3OR16-13A0A075B7E8 117 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 IGHV3-74A0A0B4J1X5 117 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 A8MXK9 166 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 LGALS3P17931 250 aaKnown RBP12.64□□□□□ -0.39
ITGB4-206ENST00000579662 EGR1P18146 543 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 S4R3C0 116 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 RAMP3O60896 148 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 TCRBV4S1A1TA0A5B7 111 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 F8VVB4 439 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 F8VWA3 439 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 RPL24P83731 157 aaKnown RBP12.64□□□□□ -0.39
ITGB4-206ENST00000579662 FAM74A4Q5TZK3 123 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 PMCHL2Q9BQD1 86 aa12.64□□□□□ -0.39
ITGB4-206ENST00000579662 VDAC2P45880 294 aaPredicted RBP12.63□□□□□ -0.39
ITGB4-206ENST00000579662 LY6DQ14210 128 aa12.63□□□□□ -0.39
ITGB4-206ENST00000579662 FAM166AQ6J272 317 aa12.63□□□□□ -0.39
ITGB4-206ENST00000579662 AHCTF1Q8WYP5 2266 aa12.63□□□□□ -0.39
ITGB4-206ENST00000579662 COX6CP09669 75 aa12.63□□□□□ -0.39
ITGB4-206ENST00000579662 EFNA4P52798 201 aa12.63□□□□□ -0.39
ITGB4-206ENST00000579662 C20orf204Q6ZNR8 217 aa12.63□□□□□ -0.39
ITGB4-206ENST00000579662 FAM169BQ8N8A8 192 aa12.63□□□□□ -0.39
ITGB4-206ENST00000579662 ATP5G3P48201 142 aa12.63□□□□□ -0.39
ITGB4-206ENST00000579662 YAE1D1Q9NRH1 226 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms