RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 CRYGCP07315 174 aa8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 PET100P0DJ07 73 aa8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 CTRB1P17538 263 aa8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 PPIFP30405 207 aaKnown RBP8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 ATP5IP56385 69 aaPredicted RBP8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 RRAS2P62070 204 aaPredicted RBP8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 VAMP2P63027 116 aa8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 CFHR3Q02985 330 aa8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 SPINK9Q5DT21 86 aa8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 CTRB2Q6GPI1 263 aa8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 ZNF329Q86UD4 541 aa8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 OR2C3Q8N628 320 aa8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 ZNF114Q8NC26 417 aa8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 OR5T1Q8NG75 326 aa8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 OR10W1Q8NGF6 305 aa8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 TAF15Q92804 592 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 RBKSQ9H477 322 aa8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 F11RQ9Y624 299 aaKnown RBP8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 U3KQ87 197 aa8.84□□□□□ -0.99
CDK5RAP3-210ENST00000578733 A0A0G2JLM5 398 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 CGB1A6NKQ9 187 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 FAM223BA6NKX1 122 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 E7EUB6 86 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 IGLV1-40P01703 118 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 TRGV3P03979 118 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 REG1AP05451 166 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 AREGP15514 252 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 TPPP2P59282 170 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 S100A10P60903 97 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 RAB11AP62491 216 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 ID3Q02535 119 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 WT1-ASQ06250 92 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 SRSF4Q08170 494 aaKnown RBP8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 C19orf54Q5BKX5 351 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 KHDC1LQ5JSQ8 128 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 FAM209BQ5JX69 171 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 ASPHD1Q5U4P2 390 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 FAM223AQ8IWN6 122 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 C3orf56Q8N813 242 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 SLC24A4Q8NFF2 622 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 OR1P1Q8NH06 330 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 CHAC2Q8WUX2 184 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 WFDC12Q8WWY7 111 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 RAB40CQ96S21 281 aa8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 LSM5Q9Y4Y9 91 aaKnown RBP8.83□□□□□ -1
CDK5RAP3-210ENST00000578733 TCRBV4S1A1TA0A5B7 111 aa8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 SSSCA1O60232 199 aa8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 SCAF4O95104 1147 aaKnown RBP8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 IFNA10P01566 189 aa8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 PSMB8P28062 276 aa8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 RAB9AP51151 201 aa8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 RPL23AP62750 156 aaKnown RBP8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 FGL1Q08830 312 aa8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 IL15RAQ13261 267 aa8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 FCN2Q15485 313 aa8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 SLC25A24Q6NUK1 477 aa8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 NECAP1Q8NC96 275 aa8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 USMG5Q96IX5 58 aa8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 MS4A10Q96PG2 267 aa8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 ZNF436Q9C0F3 470 aaPredicted RBP8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 MAGT1Q9H0U3 335 aa8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 TSSC4Q9Y5U2 329 aaPredicted RBP8.82□□□□□ -1
CDK5RAP3-210ENST00000578733 A0A1B0GW64 132 aa8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 RPS10-NUDT3A0A1W2PQS6 291 aa8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 SIX6O95475 246 aa8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 MBPP02686 304 aaPredicted RBP8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 GIPP09681 153 aaPredicted RBP8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 OR8U8P0C7N1 319 aa8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 IAPPP10997 89 aa8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 NPY1RP25929 384 aa8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 TAS2R30P59541 319 aa8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 POLR2GP62487 172 aaKnown RBP eCLIP8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 EXOSC2Q13868 293 aaKnown RBP8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 C2orf68Q2NKX9 166 aa8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 C2orf83Q53S99 150 aa8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 RNF152Q8N8N0 203 aa8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 CXorf58Q96LI9 332 aa8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 P2RX4Q99571 388 aa8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 ZNF747Q9BV97 191 aa8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 PSENENQ9NZ42 101 aa8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 PAIP2BQ9ULR5 123 aaKnown RBP8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 RCL1Q9Y2P8 373 aaKnown RBP8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 STRAPQ9Y3F4 350 aaKnown RBP8.81□□□□□ -1
CDK5RAP3-210ENST00000578733 IGLV11-55A0A075B6I3 123 aa8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 E5RGE8 158 aa8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 K7EPK0 472 aa8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 SOX15O60248 233 aa8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 TSC22D2O75157 780 aa8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 SCGB2A1O75556 95 aa8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 BCAP31P51572 246 aa8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 RHOGP84095 191 aa8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 ATP5G2Q06055 141 aa8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 RAB32Q13637 225 aa8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 ETFRF1Q6IPR1 90 aa8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 SHISA2Q6UWI4 295 aa8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 OR11H7Q8NGC8 314 aa8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 RNASEH2CQ8TDP1 164 aaKnown RBP8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 WIPF2Q8TF74 440 aaPredicted RBP8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 EEF1AKMT3Q96AZ1 226 aa8.8□□□□□ -1
CDK5RAP3-210ENST00000578733 MISP3Q96FF7 219 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms