RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 TEX22C9J3V5 150 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 HLA-DRB1P01911 266 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 SEC11BP0C7V7 166 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 DLK1P80370 383 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 FXYD3Q14802 87 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 C9orf139Q6ZV77 190 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 ZNF114Q8NC26 417 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 PIFOQ8TCI5 191 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 SCGB1C1Q8TD33 95 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 GNPNAT1Q96EK6 184 aaPredicted RBP14.75□□□□□ -0.05
PRKCA-203ENST00000578063 RASL11BQ9BPW5 248 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 MOB4Q9Y3A3 225 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 UBE2L5PA0A1B0GUS4 154 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 FBXO24O75426 580 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 SPP1P10451 314 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 TUSC1Q2TAM9 212 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 CLLU1Q5K131 121 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 RBM14Q96PK6 669 aaKnown RBP14.75□□□□□ -0.05
PRKCA-203ENST00000578063 SLC25A33Q9BSK2 321 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 SLC25A32Q9H2D1 315 aa14.75□□□□□ -0.05
PRKCA-203ENST00000578063 SOX21Q9Y651 276 aaPredicted RBP14.75□□□□□ -0.05
PRKCA-203ENST00000578063 CSMD1Q96PZ7 3565 aa14.74□□□□□ -0.05
PRKCA-203ENST00000578063 ATP6V0CP27449 155 aa14.74□□□□□ -0.05
PRKCA-203ENST00000578063 FAM74A1Q5RGS3 127 aa14.74□□□□□ -0.05
PRKCA-203ENST00000578063 LRRC20Q8TCA0 184 aa14.74□□□□□ -0.05
PRKCA-203ENST00000578063 ARPC1AQ92747 370 aa14.74□□□□□ -0.05
PRKCA-203ENST00000578063 WDR61Q9GZS3 305 aaKnown RBP14.74□□□□□ -0.05
PRKCA-203ENST00000578063 PITPNC1Q9UKF7 332 aa14.74□□□□□ -0.05
PRKCA-203ENST00000578063 RPS10-NUDT3A0A1W2PQS6 291 aa14.73□□□□□ -0.05
PRKCA-203ENST00000578063 FGF16O43320 207 aa14.73□□□□□ -0.05
PRKCA-203ENST00000578063 CX3CL1P78423 397 aa14.73□□□□□ -0.05
PRKCA-203ENST00000578063 NDUFA5Q16718 116 aa14.73□□□□□ -0.05
PRKCA-203ENST00000578063 ABHD5Q8WTS1 349 aa14.73□□□□□ -0.05
PRKCA-203ENST00000578063 SSMEM1Q8WWF3 244 aa14.73□□□□□ -0.05
PRKCA-203ENST00000578063 P2RX4Q99571 388 aa14.73□□□□□ -0.05
PRKCA-203ENST00000578063 FNDC10F2Z333 226 aa14.72□□□□□ -0.05
PRKCA-203ENST00000578063 H3BUX3 64 aa14.72□□□□□ -0.05
PRKCA-203ENST00000578063 AREGP15514 252 aa14.72□□□□□ -0.05
PRKCA-203ENST00000578063 C5orf56Q8N8D9 126 aa14.72□□□□□ -0.05
PRKCA-203ENST00000578063 RNASEH2CQ8TDP1 164 aaKnown RBP14.72□□□□□ -0.05
PRKCA-203ENST00000578063 RNF141Q8WVD5 230 aa14.72□□□□□ -0.05
PRKCA-203ENST00000578063 SH3BGRL3Q9H299 93 aa14.72□□□□□ -0.05
PRKCA-203ENST00000578063 A6NDX4 124 aa14.72□□□□□ -0.05
PRKCA-203ENST00000578063 DEFB112Q30KQ8 113 aa14.72□□□□□ -0.05
PRKCA-203ENST00000578063 OR1P1Q8NH06 330 aa14.72□□□□□ -0.05
PRKCA-203ENST00000578063 TAF15Q92804 592 aaKnown RBP eCLIP14.72□□□□□ -0.054e-7■■■■□ 21.2
PRKCA-203ENST00000578063 ZANQ9Y493 2812 aa14.71□□□□□ -0.05
PRKCA-203ENST00000578063 IGHV7-81A0A0B4J1V7 117 aa14.71□□□□□ -0.05
PRKCA-203ENST00000578063 REG1AP05451 166 aa14.71□□□□□ -0.05
PRKCA-203ENST00000578063 NMBP08949 121 aa14.71□□□□□ -0.05
PRKCA-203ENST00000578063 SULT1A2P50226 295 aa14.71□□□□□ -0.05
PRKCA-203ENST00000578063 RUNX1Q01196 453 aa14.71□□□□□ -0.05
PRKCA-203ENST00000578063 PVRIGQ6DKI7 326 aa14.71□□□□□ -0.05
PRKCA-203ENST00000578063 C16orf82Q7Z2V1 217 aa14.71□□□□□ -0.05
PRKCA-203ENST00000578063 TMEM219Q86XT9 240 aa14.71□□□□□ -0.05
PRKCA-203ENST00000578063 PSMG3Q9BT73 122 aaPredicted RBP14.71□□□□□ -0.05
PRKCA-203ENST00000578063 F11RQ9Y624 299 aaKnown RBP14.71□□□□□ -0.05
PRKCA-203ENST00000578063 SMCO3A2RU48 225 aa14.7□□□□□ -0.06
PRKCA-203ENST00000578063 M0QZK8 103 aa14.7□□□□□ -0.06
PRKCA-203ENST00000578063 CORTO00230 105 aa14.7□□□□□ -0.06
PRKCA-203ENST00000578063 CD5LO43866 347 aa14.7□□□□□ -0.06
PRKCA-203ENST00000578063 MDKP21741 143 aaPredicted RBP14.7□□□□□ -0.06
PRKCA-203ENST00000578063 FGF7P21781 194 aa14.7□□□□□ -0.06
PRKCA-203ENST00000578063 NDPQ00604 133 aa14.7□□□□□ -0.06
PRKCA-203ENST00000578063 BCL6BQ8N143 479 aaPredicted RBP14.7□□□□□ -0.06
PRKCA-203ENST00000578063 OR2G3Q8NGZ4 309 aa14.7□□□□□ -0.06
PRKCA-203ENST00000578063 CACNG8Q8WXS5 425 aa14.7□□□□□ -0.06
PRKCA-203ENST00000578063 WDR83OSQ9Y284 106 aa14.7□□□□□ -0.06
PRKCA-203ENST00000578063 TIMM9Q9Y5J7 89 aa14.7□□□□□ -0.06
PRKCA-203ENST00000578063 ABCA1O95477 2261 aa14.7□□□□□ -0.06
PRKCA-203ENST00000578063 MDFIC2A0A1B0GVS7 189 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 MPDU1O75352 247 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 APELAP0DMC3 54 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 GPX4P36969 197 aaPredicted RBP14.69□□□□□ -0.06
PRKCA-203ENST00000578063 RAB5CP51148 216 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 CD69Q07108 199 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 ARSJQ5FYB0 599 aaPredicted RBP14.69□□□□□ -0.06
PRKCA-203ENST00000578063 FAM103A1Q9BTL3 118 aaKnown RBP14.69□□□□□ -0.06
PRKCA-203ENST00000578063 NPVFQ9HCQ7 196 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 SVEP1Q4LDE5 3571 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 FLNAP21333 2647 aaKnown RBP14.69□□□□□ -0.06
PRKCA-203ENST00000578063 UMAD1C9J7I0 102 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 TSPAN9O75954 239 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 FAM157CP0CG43 387 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 CTRB1P17538 263 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 KRTAP1-1Q07627 177 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 LY6EQ16553 131 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 CTRB2Q6GPI1 263 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 OR1L6Q8NGR2 347 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 OR5R1Q8NH85 324 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 PCNPQ8WW12 178 aaKnown RBP14.69□□□□□ -0.06
PRKCA-203ENST00000578063 C22orf15Q8WYQ4 148 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 RSG1Q9BU20 258 aa14.69□□□□□ -0.06
PRKCA-203ENST00000578063 NPIPB5A8MRT5 1133 aa14.68□□□□□ -0.06
PRKCA-203ENST00000578063 AKR1C1Q04828 323 aa14.68□□□□□ -0.06
PRKCA-203ENST00000578063 BTNL8Q6UX41 500 aa14.68□□□□□ -0.06
PRKCA-203ENST00000578063 TREML4Q6UXN2 200 aa14.68□□□□□ -0.06
PRKCA-203ENST00000578063 SLC16A13Q7RTY0 426 aa14.68□□□□□ -0.06
PRKCA-203ENST00000578063 HSPB9Q9BQS6 159 aa14.68□□□□□ -0.06
PRKCA-203ENST00000578063 C17orf112F2Z3M2 114 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms