RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 NPY1RP25929 384 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 PRRX1P54821 245 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 ZNF474Q6S9Z5 364 aaPredicted RBP4.39□□□□□ -1.71
VAPA-203ENST00000577539 ZCCHC24Q8N2G6 241 aaKnown RBP4.39□□□□□ -1.71
VAPA-203ENST00000577539 FAM216BQ8N7L0 139 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 PARD6GQ9BYG4 376 aaPredicted RBP4.39□□□□□ -1.71
VAPA-203ENST00000577539 SRD5A3Q9H8P0 318 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 TMEM242Q9NWH2 141 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 ZNRD1Q9P1U0 126 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 RNF7Q9UBF6 113 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 PITPNC1Q9UKF7 332 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 F6UZH7 168 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 PFN1P07737 140 aaKnown RBP4.39□□□□□ -1.71
VAPA-203ENST00000577539 C1QTNF9P0C862 333 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 COL8A2P25067 703 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 GLRXP35754 106 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 THBS3P49746 956 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 EIF4EBP1Q13541 118 aaPredicted RBP4.39□□□□□ -1.71
VAPA-203ENST00000577539 Q8TCH9 128 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 SNRNP40Q96DI7 357 aaKnown RBP4.39□□□□□ -1.71
VAPA-203ENST00000577539 FAM122AQ96E09 287 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 IFI27L2Q9H2X8 130 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 TUBG2Q9NRH3 451 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 SAA2-SAA4A0A096LPE2 208 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 YPEL1O60688 119 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 ELANEP08246 267 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 SAA2P0DJI9 122 aaPredicted RBP4.39□□□□□ -1.71
VAPA-203ENST00000577539 NPPCP23582 126 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 REG1BP48304 166 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 RAB7AP51149 207 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 GNB1P62873 340 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 GUSBP1Q15486 140 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 FBLN7Q53RD9 439 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 CT45A1Q5HYN5 189 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 OR4A47Q6IF82 309 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 ZNF600Q6ZNG1 722 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 CENPVQ7Z7K6 275 aaPredicted RBP4.39□□□□□ -1.71
VAPA-203ENST00000577539 SLC24A4Q8NFF2 622 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 OR4P4Q8NGL7 312 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 CT45A3Q8NHU0 189 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 H1FXQ92522 213 aaKnown RBP4.39□□□□□ -1.71
VAPA-203ENST00000577539 YPEL2Q96QA6 119 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 MEGF9Q9H1U4 602 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 HCFC1P51610 2035 aa4.39□□□□□ -1.71
VAPA-203ENST00000577539 A0A1W2PN81 502 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 NDUFS8O00217 210 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 TIMM23BQ5SRD1 257 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 SPATA31B1PQ5VZV4 182 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 TGIF2LYQ8IUE0 185 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 OR1P1Q8NH06 330 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 SGMS2Q8NHU3 365 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 MGST2Q99735 147 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 HIST1H2BLQ99880 126 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 GGTLC1Q9BX51 225 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 PLEKHA3Q9HB20 300 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 NPVFQ9HCQ7 196 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 RAB9BQ9NP90 201 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 NGBQ9NPG2 151 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 DMRT1Q9Y5R6 373 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 SCO2A0A1W2PP80 73 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 TSTD3H0UI37 97 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 PDE6DO43924 150 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 OR7C2O60412 319 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 CA2P00918 260 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 IGHV2-70P01814 119 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 IL6RP08887 468 aaPredicted RBP4.38□□□□□ -1.71
VAPA-203ENST00000577539 GATA2P23769 480 aaPredicted RBP4.38□□□□□ -1.71
VAPA-203ENST00000577539 HSPE1P61604 102 aaKnown RBP4.38□□□□□ -1.71
VAPA-203ENST00000577539 TRAPPC1Q9Y5R8 145 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 KBTBD11-OT1A0A1B0GTJ5 212 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 J3QR06 171 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 SPINK4O60575 86 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 CGAP01215 116 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 IGFBP2P18065 325 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 LOXL3P58215 753 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 RHOBP62745 196 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 ZNF114Q8NC26 417 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 OR51B2Q9Y5P1 312 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 LOC400499M0QZD8 3231 aa4.38□□□□□ -1.71
VAPA-203ENST00000577539 MED13LQ71F56 2210 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 MBD3L5A6NJ08 208 aaPredicted RBP4.37□□□□□ -1.71
VAPA-203ENST00000577539 MPDU1O75352 247 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 MMP23AO75900 390 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 CXorf1O96002 111 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 MT-CO2P00403 227 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 SNRPCP09234 159 aaKnown RBP4.37□□□□□ -1.71
VAPA-203ENST00000577539 GCSHP23434 173 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 OPRK1P41145 380 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 KIR2DS2P43631 304 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 VDAC2P45880 294 aaPredicted RBP4.37□□□□□ -1.71
VAPA-203ENST00000577539 ZNF90Q03938 601 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 PRSS8Q16651 343 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 RTL8BQ17RB0 113 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 PIP4P1Q86T03 277 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 MOB3BQ86TA1 216 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 LINC01551Q86U37 167 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 MBD3L2Q8NHZ7 208 aaPredicted RBP4.37□□□□□ -1.71
VAPA-203ENST00000577539 CCL17Q92583 94 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 ACY3Q96HD9 319 aa4.37□□□□□ -1.71
VAPA-203ENST00000577539 UHRF2Q96PU4 802 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms