RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TEX50A0A1B0GTY4 177 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 ZNF705EA8MWA4 302 aaPredicted RBP6.53□□□□□ -1.36
SMG6-218ENST00000575454 CASQ2O14958 399 aaPredicted RBP6.53□□□□□ -1.36
SMG6-218ENST00000575454 TNFSF12O43508 249 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 SPP1P10451 314 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 NPY1RP25929 384 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 GNG2P59768 71 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 ERVK-16P61578 105 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 WT1-ASQ06250 92 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 MLLT11Q13015 90 aaPredicted RBP6.53□□□□□ -1.36
SMG6-218ENST00000575454 FAM90A2PQ658T7 463 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 ZNF773Q6PK81 442 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 TCF24Q7RTU0 167 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 GBGT1Q8N5D6 347 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 OR10W1Q8NGF6 305 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 BORCS5Q969J3 196 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 TMEM231Q9H6L2 316 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 NDUFA4L2Q9NRX3 87 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 COMMD9Q9P000 198 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 DEFB131BA0A096LNP1 70 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 IGHV3-21A0A0B4J1V1 117 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 TRAV3A0A0B4J244 114 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 F8W735 103 aaPredicted RBP6.52□□□□□ -1.37
SMG6-218ENST00000575454 K7EIM0 57 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 M0R2N4 97 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 SULT1C2O00338 296 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 SNAPC5O75971 98 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 IFNA10P01566 189 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 IFNA21P01568 189 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 IFNA17P01571 189 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 RBMY1A1P0DJD3 496 aaKnown RBP6.52□□□□□ -1.37
SMG6-218ENST00000575454 RBMY1CP0DJD4 496 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 MYL9P24844 172 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 FCGR2CP31995 323 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 MFAP4P55083 255 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 DEFB131AP59861 70 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 RPL11P62913 178 aaKnown RBP6.52□□□□□ -1.37
SMG6-218ENST00000575454 FABP5Q01469 135 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 RBMY1FQ15415 496 aaKnown RBP6.52□□□□□ -1.37
SMG6-218ENST00000575454 CADM3Q8N126 398 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 OR1P1Q8NH06 330 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 SECTM1Q8WVN6 248 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 TMEM56Q96MV1 263 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 HINT2Q9BX68 163 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 MS4A6AQ9H2W1 248 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 CCL28Q9NRJ3 127 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 FKBP11Q9NYL4 201 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 TBC1D24Q9ULP9 559 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 TPRKBQ9Y3C4 175 aa6.52□□□□□ -1.37
SMG6-218ENST00000575454 IGHV3-49A0A0A0MS15 119 aa6.51□□□□□ -1.37
SMG6-218ENST00000575454 ST8SIA3O43173 380 aa6.51□□□□□ -1.37
SMG6-218ENST00000575454 RAB3BP20337 219 aa6.51□□□□□ -1.37
SMG6-218ENST00000575454 LEMD1Q68G75 181 aa6.51□□□□□ -1.37
SMG6-218ENST00000575454 OR13F1Q8NGS4 319 aa6.51□□□□□ -1.37
SMG6-218ENST00000575454 FAM210BQ96KR6 192 aa6.51□□□□□ -1.37
SMG6-218ENST00000575454 GPHA2Q96T91 129 aa6.51□□□□□ -1.37
SMG6-218ENST00000575454 MGLLQ99685 303 aa6.51□□□□□ -1.37
SMG6-218ENST00000575454 SLC5A7Q9GZV3 580 aa6.51□□□□□ -1.37
SMG6-218ENST00000575454 NXF2Q9GZY0 626 aaKnown RBP6.51□□□□□ -1.37
SMG6-218ENST00000575454 VCXQ9H320 206 aa6.51□□□□□ -1.37
SMG6-218ENST00000575454 TMEM14BQ9NUH8 114 aa6.51□□□□□ -1.37
SMG6-218ENST00000575454 ELF5Q9UKW6 265 aaPredicted RBP6.51□□□□□ -1.37
SMG6-218ENST00000575454 PRNDQ9UKY0 176 aa6.51□□□□□ -1.37
SMG6-218ENST00000575454 OR51B2Q9Y5P1 312 aa6.51□□□□□ -1.37
SMG6-218ENST00000575454 DMBT1Q9UGM3 2413 aaPredicted RBP6.51□□□□□ -1.37
SMG6-218ENST00000575454 A0A1W2PS18 150 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 MARCH11A6NNE9 402 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 RGS10O43665 173 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 PPYP01298 95 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 NPBWR1P48145 328 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 OR10A3P58181 314 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 AADACL3Q5VUY0 350 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 TRPT1Q86TN4 253 aaKnown RBP6.5□□□□□ -1.37
SMG6-218ENST00000575454 TPRA1Q86W33 373 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 UBE2DNLQ8IWF7 75 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 BEST4Q8NFU0 473 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 NUDCD2Q8WVJ2 157 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 SLC25A46Q96AG3 418 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 GRAMD2BQ96HH9 432 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 ZNF414Q96IQ9 312 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 TSC22D3Q99576 134 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 VSIRQ9H7M9 311 aa6.5□□□□□ -1.37
SMG6-218ENST00000575454 LRP1BQ9NZR2 4599 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 IGHV3OR16-13A0A075B7E8 117 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 ELOA3CA0A087WX78 387 aaPredicted RBP6.49□□□□□ -1.37
SMG6-218ENST00000575454 IGHV3-74A0A0B4J1X5 117 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 TMEM235A6NFC5 223 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 GNG7O60262 68 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 CDK2AP2O75956 126 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 GIG44P09565 113 aaPredicted RBP6.49□□□□□ -1.37
SMG6-218ENST00000575454 NUTF2P61970 127 aaKnown RBP6.49□□□□□ -1.37
SMG6-218ENST00000575454 C12orf74Q32Q52 190 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 KCTD21Q4G0X4 260 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 UBE2UQ5VVX9 321 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 TOMM20LQ6UXN7 152 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 HOGA1Q86XE5 327 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 ZNF575Q86XF7 245 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 TSPAN14Q8NG11 270 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 OR51H1Q8NH63 302 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 ST8SIA2Q92186 375 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms