RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ABHD5Q8WTS1 349 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 NEU4Q8WWR8 484 aaPredicted RBP11.35□□□□□ -0.59
VPS33B-208ENST00000574755 SIRT7Q9NRC8 400 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 INSIG2Q9Y5U4 225 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 PIEZO1Q92508 2521 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 C11orf94C9JXX5 98 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 LIPFP07098 398 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 STAG3L2P0CL84 134 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 STAG3L3P0CL85 134 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 LGALS7P47929 136 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 UBE2G2P60604 165 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 GAMTQ14353 236 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 TMEM249Q2WGJ8 235 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 SPNS3Q6ZMD2 512 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 BEND2Q8NDZ0 799 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 PARLQ9H300 379 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 TPSG1Q9NRR2 321 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 NAT8Q9UHE5 227 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 URGCP-MRPS24S4R325 110 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 CXorf1O96002 111 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 CST9LP1Q5W188 147 aa11.34□□□□□ -0.59
VPS33B-208ENST00000574755 SEPSECSQ9HD40 501 aaKnown RBP11.34□□□□□ -0.59
VPS33B-208ENST00000574755 IGHV1-3A0A0C4DH29 117 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 CXorf65A6NEN9 183 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 CGB1A6NKQ9 187 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 INS-IGF2F8WCM5 200 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 UQCRFS1P47985 274 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 RHOBP62745 196 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 PRR20EP86478 221 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 PRR20CP86479 221 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 PRR20DP86480 221 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 PRR20BP86481 221 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 PRR20AP86496 221 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 WT1-ASQ06250 92 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 CD69Q07108 199 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 HABP2Q14520 560 aaPredicted RBP11.33□□□□□ -0.6
VPS33B-208ENST00000574755 MLANAQ16655 118 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 ZNF343Q6P1L6 599 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 CYP2G1PQ6ZSU1 146 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 YPEL4Q96NS1 127 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 IGKV1OR2-108A0A075B7D4 117 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 C22orf46C9J442 243 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 MAS1LP35410 378 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 ADIRFQ15847 76 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 TMEM241Q24JQ0 296 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 PNKDQ8N490 385 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 OR4P4Q8NGL7 312 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 RPEQ96AT9 228 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 CHODLQ9H9P2 273 aa11.33□□□□□ -0.6
VPS33B-208ENST00000574755 AMMECR1Q9Y4X0 333 aaPredicted RBP11.33□□□□□ -0.6
VPS33B-208ENST00000574755 NAV3Q8IVL0 2385 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 TSPAN9O75954 239 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 ELOBQ15370 118 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 DTX2Q86UW9 622 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 LY6G5BQ8NDX9 201 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 BIN3Q9NQY0 253 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 SLC45A2Q9UMX9 530 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 A0A1W2PPR1 153 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 NDUFS6O75380 124 aaKnown RBP11.32□□□□□ -0.6
VPS33B-208ENST00000574755 ACTL6BO94805 426 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 OR10J1P30954 320 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 ATP5G3P48201 142 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 SUB1P53999 127 aaKnown RBP eCLIP11.32□□□□□ -0.61e-6■■■■■ 30.8
VPS33B-208ENST00000574755 C4orf17Q53FE4 359 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 SLC16A13Q7RTY0 426 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 NANPQ8TBE9 248 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 Q8WTZ3 238 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 CACNG8Q8WXS5 425 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 SSBP3Q9BWW4 388 aaPredicted RBP11.32□□□□□ -0.6
VPS33B-208ENST00000574755 PLXNB1O43157 2135 aa11.32□□□□□ -0.6
VPS33B-208ENST00000574755 PDE6DO43924 150 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 LINC00869P0C866 280 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 AGAP20933 346 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 GNLYP22749 145 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 CNTFRP26992 372 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 ARF6P62330 175 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 KIAA0141Q14154 515 aaPredicted RBP11.31□□□□□ -0.6
VPS33B-208ENST00000574755 FAM78BQ5VT40 261 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 SPATA31B1PQ5VZV4 182 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 TEX45Q8NA69 505 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 OR51G1Q8NGK1 321 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 ITLN2Q8WWU7 325 aaPredicted RBP11.31□□□□□ -0.6
VPS33B-208ENST00000574755 ACY3Q96HD9 319 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 SLC35E1Q96K37 410 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 TMEM242Q9NWH2 141 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 PKD1L2Q7Z442 2459 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 ARHGAP32A7KAX9 2087 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 A0A1W2PPI3 338 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 CLDN34H7C241 214 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 GATA2P23769 480 aaPredicted RBP11.31□□□□□ -0.6
VPS33B-208ENST00000574755 CDKN1AP38936 164 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 MRGPRG-AS1Q2M3A8 158 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 MMD2Q8IY49 270 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 MALSU1Q96EH3 234 aa11.31□□□□□ -0.6
VPS33B-208ENST00000574755 CACNA1AO00555 2505 aa11.3□□□□□ -0.6
VPS33B-208ENST00000574755 MT-CO2P00403 227 aa11.3□□□□□ -0.6
VPS33B-208ENST00000574755 REG1AP05451 166 aa11.3□□□□□ -0.6
VPS33B-208ENST00000574755 GPX4P36969 197 aaPredicted RBP11.3□□□□□ -0.6
VPS33B-208ENST00000574755 RPS10P46783 165 aaKnown RBP11.3□□□□□ -0.6
VPS33B-208ENST00000574755 TNXAQ16473 311 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms