RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 C13orf42A0A1B0GVH6 325 aa25.67■■□□□ 1.7
CTDNEP1-209ENST00000574205 PF4P02776 101 aa25.67■■□□□ 1.7
CTDNEP1-209ENST00000574205 SMCO1Q147U7 214 aa25.67■■□□□ 1.7
CTDNEP1-209ENST00000574205 FANCD2OSQ96PS1 177 aa25.67■■□□□ 1.7
CTDNEP1-209ENST00000574205 IGHV3-11P01762 117 aa25.66■■□□□ 1.7
CTDNEP1-209ENST00000574205 LGALS1P09382 135 aaKnown RBP25.66■■□□□ 1.7
CTDNEP1-209ENST00000574205 HIST1H1BP16401 226 aaKnown RBP25.66■■□□□ 1.7
CTDNEP1-209ENST00000574205 DEFB136Q30KP8 78 aa25.66■■□□□ 1.7
CTDNEP1-209ENST00000574205 A0A1B0GU03 582 aa25.65■■□□□ 1.7
CTDNEP1-209ENST00000574205 CYB5BO43169 146 aa25.65■■□□□ 1.7
CTDNEP1-209ENST00000574205 DEFA5Q01523 94 aa25.65■■□□□ 1.7
CTDNEP1-209ENST00000574205 ETV3LQ6ZN32 361 aa25.65■■□□□ 1.7
CTDNEP1-209ENST00000574205 RAX2Q96IS3 184 aa25.65■■□□□ 1.7
CTDNEP1-209ENST00000574205 IGLV11-55A0A075B6I3 123 aa25.64■■□□□ 1.7
CTDNEP1-209ENST00000574205 INS-IGF2F8WCM5 200 aa25.64■■□□□ 1.7
CTDNEP1-209ENST00000574205 CCL24O00175 119 aa25.64■■□□□ 1.7
CTDNEP1-209ENST00000574205 OR2J3O76001 311 aa25.64■■□□□ 1.7
CTDNEP1-209ENST00000574205 MYCNOSP40205 109 aa25.64■■□□□ 1.7
CTDNEP1-209ENST00000574205 SPCS3P61009 180 aa25.64■■□□□ 1.7
CTDNEP1-209ENST00000574205 PDLIM3Q53GG5 364 aaPredicted RBP25.64■■□□□ 1.7
CTDNEP1-209ENST00000574205 SPINK9Q5DT21 86 aa25.64■■□□□ 1.7
CTDNEP1-209ENST00000574205 OR2C3Q8N628 320 aa25.64■■□□□ 1.7
CTDNEP1-209ENST00000574205 OR52B4Q8NGK2 314 aa25.64■■□□□ 1.7
CTDNEP1-209ENST00000574205 MITD1Q8WV92 249 aa25.64■■□□□ 1.7
CTDNEP1-209ENST00000574205 F11RQ9Y624 299 aaKnown RBP25.64■■□□□ 1.7
CTDNEP1-209ENST00000574205 HOXB5P09067 269 aa25.63■■□□□ 1.69
CTDNEP1-209ENST00000574205 SLC25A6P12236 298 aa25.63■■□□□ 1.69
CTDNEP1-209ENST00000574205 ERHP84090 104 aaKnown RBP25.63■■□□□ 1.69
CTDNEP1-209ENST00000574205 PLET1Q6UQ28 207 aa25.63■■□□□ 1.69
CTDNEP1-209ENST00000574205 OR11H1Q8NG94 326 aa25.63■■□□□ 1.69
CTDNEP1-209ENST00000574205 FBXL7Q9UJT9 491 aa25.63■■□□□ 1.69
CTDNEP1-209ENST00000574205 C15orf32Q32M92 178 aa25.63■■□□□ 1.69
CTDNEP1-209ENST00000574205 OR1L6Q8NGR2 347 aa25.63■■□□□ 1.69
CTDNEP1-209ENST00000574205 DUX3Q96PT4 197 aa25.63■■□□□ 1.69
CTDNEP1-209ENST00000574205 P2RX4Q99571 388 aa25.63■■□□□ 1.69
CTDNEP1-209ENST00000574205 THYN1Q9P016 225 aa25.63■■□□□ 1.69
CTDNEP1-209ENST00000574205 MGAM2Q2M2H8 2515 aa25.62■■□□□ 1.69
CTDNEP1-209ENST00000574205 HOXA1P49639 335 aaPredicted RBP25.62■■□□□ 1.69
CTDNEP1-209ENST00000574205 ATP5G2Q06055 141 aa25.62■■□□□ 1.69
CTDNEP1-209ENST00000574205 PALMDQ9NP74 551 aa25.62■■□□□ 1.69
CTDNEP1-209ENST00000574205 ENY2Q9NPA8 101 aa25.62■■□□□ 1.69
CTDNEP1-209ENST00000574205 GGNBP1Q5YKI7 109 aa25.61■■□□□ 1.69
CTDNEP1-209ENST00000574205 ZNF114Q8NC26 417 aa25.61■■□□□ 1.69
CTDNEP1-209ENST00000574205 ZNF431Q8TF32 576 aaPredicted RBP25.61■■□□□ 1.69
CTDNEP1-209ENST00000574205 SEC22CQ9BRL7 303 aa25.61■■□□□ 1.69
CTDNEP1-209ENST00000574205 DMRT1Q9Y5R6 373 aa25.61■■□□□ 1.69
CTDNEP1-209ENST00000574205 FHL3Q13643 280 aa25.6■■□□□ 1.69
CTDNEP1-209ENST00000574205 ZNF343Q6P1L6 599 aa25.6■■□□□ 1.69
CTDNEP1-209ENST00000574205 OR1P1Q8NH06 330 aa25.6■■□□□ 1.69
CTDNEP1-209ENST00000574205 OR1S1Q8NH92 325 aa25.6■■□□□ 1.69
CTDNEP1-209ENST00000574205 ADAP1O75689 374 aa25.59■■□□□ 1.69
CTDNEP1-209ENST00000574205 ZNF616Q08AN1 781 aa25.59■■□□□ 1.69
CTDNEP1-209ENST00000574205 SLC25A24Q6NUK1 477 aa25.59■■□□□ 1.69
CTDNEP1-209ENST00000574205 OR1N2Q8NGR9 330 aa25.59■■□□□ 1.69
CTDNEP1-209ENST00000574205 HSPB7Q9UBY9 170 aa25.59■■□□□ 1.69
CTDNEP1-209ENST00000574205 PITX3O75364 302 aa25.58■■□□□ 1.69
CTDNEP1-209ENST00000574205 NDUFB8O95169 186 aa25.58■■□□□ 1.69
CTDNEP1-209ENST00000574205 IFNA21P01568 189 aa25.58■■□□□ 1.69
CTDNEP1-209ENST00000574205 IL5P05113 134 aa25.58■■□□□ 1.69
CTDNEP1-209ENST00000574205 TNFRSF9Q07011 255 aa25.58■■□□□ 1.69
CTDNEP1-209ENST00000574205 NXPH3O95157 252 aa25.58■■□□□ 1.68
CTDNEP1-209ENST00000574205 SNCAP37840 140 aa25.58■■□□□ 1.68
CTDNEP1-209ENST00000574205 EXOSC2Q13868 293 aaKnown RBP25.58■■□□□ 1.68
CTDNEP1-209ENST00000574205 DPF1Q92782 380 aa25.58■■□□□ 1.68
CTDNEP1-209ENST00000574205 MARVELD1Q9BSK0 173 aa25.58■■□□□ 1.68
CTDNEP1-209ENST00000574205 HSPB1P04792 205 aaKnown RBP25.57■■□□□ 1.68
CTDNEP1-209ENST00000574205 MFAP2P55001 183 aa25.57■■□□□ 1.68
CTDNEP1-209ENST00000574205 LINC00482Q8N8I6 264 aa25.57■■□□□ 1.68
CTDNEP1-209ENST00000574205 RANGRFQ9HD47 186 aaPredicted RBP25.57■■□□□ 1.68
CTDNEP1-209ENST00000574205 CEBPZOSA8MTT3 80 aa25.56■■□□□ 1.68
CTDNEP1-209ENST00000574205 INMT-MINDY4F8WBC2 141 aa25.56■■□□□ 1.68
CTDNEP1-209ENST00000574205 OR8U8P0C7N1 319 aa25.56■■□□□ 1.68
CTDNEP1-209ENST00000574205 FAM209BQ5JX69 171 aa25.56■■□□□ 1.68
CTDNEP1-209ENST00000574205 CXorf58Q96LI9 332 aa25.56■■□□□ 1.68
CTDNEP1-209ENST00000574205 IGHV4OR15-8A0A075B7B6 117 aa25.55■■□□□ 1.68
CTDNEP1-209ENST00000574205 A0A087WW49 117 aa25.55■■□□□ 1.68
CTDNEP1-209ENST00000574205 LINC01619G3V211 115 aa25.55■■□□□ 1.68
CTDNEP1-209ENST00000574205 PEF1Q9UBV8 284 aaKnown RBP25.55■■□□□ 1.68
CTDNEP1-209ENST00000574205 PRAF2O60831 178 aa25.54■■□□□ 1.68
CTDNEP1-209ENST00000574205 PTTG1O95997 202 aa25.54■■□□□ 1.68
CTDNEP1-209ENST00000574205 WFDC9Q8NEX5 89 aa25.54■■□□□ 1.68
CTDNEP1-209ENST00000574205 EEF1AKMT3Q96AZ1 226 aa25.54■■□□□ 1.68
CTDNEP1-209ENST00000574205 HEYLQ9NQ87 328 aaPredicted RBP25.54■■□□□ 1.68
CTDNEP1-209ENST00000574205 ANKRD34BA5PLL1 514 aa25.53■■□□□ 1.68
CTDNEP1-209ENST00000574205 MPTX1A8MV57 137 aa25.53■■□□□ 1.68
CTDNEP1-209ENST00000574205 FAM90A26D6RGX4 464 aa25.53■■□□□ 1.68
CTDNEP1-209ENST00000574205 CD33P20138 364 aa25.53■■□□□ 1.68
CTDNEP1-209ENST00000574205 SUB1P53999 127 aaKnown RBP eCLIP25.53■■□□□ 1.68
CTDNEP1-209ENST00000574205 C12orf45Q8N5I9 185 aaPredicted RBP25.53■■□□□ 1.68
CTDNEP1-209ENST00000574205 GPN1Q9HCN4 374 aaPredicted RBP25.53■■□□□ 1.68
CTDNEP1-209ENST00000574205 HIPK2Q9H2X6 1198 aa25.53■■□□□ 1.68
CTDNEP1-209ENST00000574205 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP25.52■■□□□ 1.68
CTDNEP1-209ENST00000574205 MFSD2BA6NFX1 497 aa25.52■■□□□ 1.68
CTDNEP1-209ENST00000574205 RNASE2P10153 161 aaKnown RBP25.52■■□□□ 1.68
CTDNEP1-209ENST00000574205 BSXQ3C1V8 233 aa25.52■■□□□ 1.68
CTDNEP1-209ENST00000574205 VN1R17PQ8TDU5 208 aa25.52■■□□□ 1.68
CTDNEP1-209ENST00000574205 TRBV7-1A0A0A6YYK4 115 aa25.51■■□□□ 1.67
CTDNEP1-209ENST00000574205 HTR2BP41595 481 aa25.51■■□□□ 1.67
CTDNEP1-209ENST00000574205 DCTN2Q13561 401 aaKnown RBP25.51■■□□□ 1.67
CTDNEP1-209ENST00000574205 UXS1Q8NBZ7 420 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms