RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 RGS5O15539 181 aa7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 GABARAPO95166 117 aa7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 RBMY1DP0C7P1 496 aaKnown RBP7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 AKR1C2P52895 323 aa7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 PPP5CP53041 499 aa7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 ELLP55199 621 aaPredicted RBP7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 GPR107Q5VW38 600 aa7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 SPSB3Q6PJ21 355 aa7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 TMEM190Q8WZ59 177 aa7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 MISP3Q96FF7 219 aa7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 ZNF436Q9C0F3 470 aaPredicted RBP7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 HIPK2Q9H2X6 1198 aa7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 DAZ1Q9NQZ3 744 aaKnown RBP7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 FAM212BQ9NTI7 297 aaPredicted RBP7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 TMEM14BQ9NUH8 114 aa7.25□□□□□ -1.25
NPLOC4-212ENST00000573328 LYSTQ99698 3801 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 TRAV25A0A0B4J276 109 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 DBX1A6NMT0 343 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 NDUFA4O00483 81 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 ZNF207O43670 478 aaKnown RBP7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 CD3DP04234 171 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 SMIM18P0DKX4 95 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 ZNF182P17025 639 aaPredicted RBP7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 PI3P19957 117 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 MFAP2P55001 183 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 UCP3P55916 312 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 SCGB2B2Q4G0G5 96 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 LAMTOR1Q6IAA8 161 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 GPR141Q7Z602 305 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 SLC35G3Q8N808 338 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 OR52I2Q8NH67 350 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 RNASE11Q8TAA1 199 aaKnown RBP7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 SCARB1Q8WTV0 552 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 PINX1Q96BK5 328 aaKnown RBP7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 ZNF486Q96H40 463 aaPredicted RBP7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 SEC22AQ96IW7 307 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 CHRDL1Q9BU40 450 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 PDCD10Q9BUL8 212 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 GGTLC1Q9BX51 225 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 COPZ2Q9P299 210 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 KLK11Q9UBX7 282 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 UBQLN2Q9UHD9 624 aa7.24□□□□□ -1.25
NPLOC4-212ENST00000573328 LOC102724200A0A096LPH7 203 aaPredicted RBP7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 K7EIM0 57 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 NUPL2O15504 423 aaKnown RBP7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 YIF1AO95070 293 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 IGKV1-39P01597 117 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 IGKV1D-39P04432 117 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 C8orf88P0DMB2 117 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 PIGPP57054 158 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 ERHP84090 104 aaKnown RBP7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 PRCDQ00LT1 54 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 RELQ04864 619 aaPredicted RBP7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 CTF1Q16619 201 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 TRIM16LQ309B1 348 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 SPINK9Q5DT21 86 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 LINC00322Q6ZN03 302 aaPredicted RBP7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 CADM3Q8N126 398 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 ARRDC1Q8N5I2 433 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 OR2C3Q8N628 320 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 CCDC71LQ8N9Z2 235 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 OR1P1Q8NH06 330 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 C15orf40Q8WUR7 153 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 ATP6V0BQ99437 205 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 SPAG8Q99932 426 aaPredicted RBP7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 MRPS26Q9BYN8 205 aaKnown RBP7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 GAR1Q9NY12 217 aaKnown RBP7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 STARD9Q9P2P6 4700 aa7.23□□□□□ -1.25
NPLOC4-212ENST00000573328 GNG7O60262 68 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 ATG12O94817 140 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 RAB3DO95716 219 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 IFNA17P01571 189 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 IGHV3-48P01763 117 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 TBPP20226 339 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 SNCAP37840 140 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 MFAP4P55083 255 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 TAS2R19P59542 299 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 RND3P61587 244 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 HSPE1P61604 102 aaKnown RBP7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 IZUMO4Q1ZYL8 232 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 IL17DQ8TAD2 202 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 ZFAND1Q8TCF1 268 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 C5orf66Q9H5L9 145 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 ENY2Q9NPA8 101 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 MTFP1Q9UDX5 166 aa7.22□□□□□ -1.25
NPLOC4-212ENST00000573328 IGKV3-7A0A075B6H7 116 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 IGHV3-49A0A0A0MS15 119 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 LCE6AA0A183 80 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 C3orf85A0A1B0GTC6 90 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 OR4C46A6NHA9 309 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 C15orf62A8K5M9 175 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 F8W735 103 aaPredicted RBP7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 TSPAN4O14817 238 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 MT-CO2P00403 227 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 ADMP35318 185 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 HOXA1P49639 335 aaPredicted RBP7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 IL18Q14116 193 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 STEAP1BQ6NZ63 245 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 LHFPL1Q86WI0 220 aa7.21□□□□□ -1.26
NPLOC4-212ENST00000573328 TMEM229BQ8NBD8 167 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms