RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 LIME1Q9H400 295 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 CTSZQ9UBR2 303 aa8.29□□□□□ -1.08
SMG6-213ENST00000573166 TRGV3P03979 118 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 DANCRP0C864 163 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 G0S2P27469 103 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 MFAP4P55083 255 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 Q71RC1 249 aaPredicted RBP8.28□□□□□ -1.08
SMG6-213ENST00000573166 OR4A5Q8NH83 315 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 BORCS7Q96B45 105 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 GINS3Q9BRX5 216 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 TNFSF18Q9UNG2 199 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 C22orf46C9J442 243 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 OR10J4P0C629 311 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 SPP1P10451 314 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 SRD5A1P18405 259 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 OR10J1P30954 320 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 LY6G6FQ5SQ64 297 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 Q6ZS49 121 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 Q6ZSR3 168 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 SRSF12Q8WXF0 261 aaKnown RBP8.28□□□□□ -1.08
SMG6-213ENST00000573166 SLC45A2Q9UMX9 530 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 IGKV1-6A0A0C4DH72 117 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 OR2J3O76001 311 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 IGHV2-5P01817 119 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 MGST1P10620 155 aaKnown RBP8.28□□□□□ -1.08
SMG6-213ENST00000573166 RPL30P62888 115 aaKnown RBP8.28□□□□□ -1.08
SMG6-213ENST00000573166 GUK1Q16774 197 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 RXFP4Q8TDU9 374 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 AAMDCQ9H7C9 122 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 TMEM56-RWDD3S4R434 201 aa8.28□□□□□ -1.08
SMG6-213ENST00000573166 A8MXK9 166 aa8.27□□□□□ -1.08
SMG6-213ENST00000573166 LINC00205P59089 165 aa8.27□□□□□ -1.08
SMG6-213ENST00000573166 ATP5G2Q06055 141 aa8.27□□□□□ -1.08
SMG6-213ENST00000573166 RUSC1-AS1Q66K80 236 aa8.27□□□□□ -1.08
SMG6-213ENST00000573166 HIST2H2BCQ6DN03 193 aa8.27□□□□□ -1.08
SMG6-213ENST00000573166 BAGE3Q86Y29 109 aa8.27□□□□□ -1.08
SMG6-213ENST00000573166 BAGE2Q86Y30 109 aa8.27□□□□□ -1.08
SMG6-213ENST00000573166 FAM216AQ8WUB2 273 aa8.27□□□□□ -1.08
SMG6-213ENST00000573166 BLNKQ8WV28 456 aa8.27□□□□□ -1.08
SMG6-213ENST00000573166 MAP1LC3B2A6NCE7 125 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 UPK2O00526 184 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 SFTA3P0C7M3 94 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 UBE2E1P51965 193 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 DYNLRB2Q8TF09 96 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 MAP1LC3BQ9GZQ8 125 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 LINC00527Q9UJ94 153 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 CA2P00918 260 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 LHBP01229 141 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 PAX6P26367 422 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 COTL1Q14019 142 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 LHFPL4Q7Z7J7 247 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 C15orf54Q8N8G6 183 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 Q8NFD4 153 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 TBL2Q9Y4P3 447 aaKnown RBP8.27□□□□□ -1.09
SMG6-213ENST00000573166 S4R3C0 116 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 ZNF98A6NK75 572 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 RRHO14718 337 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 MMP23AO75900 390 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 PLA2G2AP14555 144 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 FAM53AQ6NSI3 398 aaPredicted RBP8.27□□□□□ -1.09
SMG6-213ENST00000573166 NPIPB3Q92617 1050 aa8.27□□□□□ -1.09
SMG6-213ENST00000573166 SAT2Q96F10 170 aaPredicted RBP8.27□□□□□ -1.09
SMG6-213ENST00000573166 LYRM2Q9NU23 88 aaPredicted RBP8.27□□□□□ -1.09
SMG6-213ENST00000573166 RUNX1Q01196 453 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 TEX45Q8NA69 505 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 C10orf105Q8TEF2 133 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 IFI27L2Q9H2X8 130 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 NCOR1P1Q9H4R4 102 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 CT45A10P0DMU9 189 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 ZNF383Q8NA42 475 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 SMIM8Q96KF7 97 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 OR4C12Q96R67 309 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 NABP2Q9BQ15 211 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 SMIM7Q9BQ49 75 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 IGHV1-69DA0A0B4J2H0 117 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 RNF222A6NCQ9 220 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 LINC00473A8K010 186 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.26□□□□□ -1.09
SMG6-213ENST00000573166 IGHV1-69P01742 117 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 LINC00869P0C866 280 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 ATP6V0CP27449 155 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 SELENOTP62341 195 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 UBE2L3P68036 154 aaKnown RBP8.26□□□□□ -1.09
SMG6-213ENST00000573166 C17orf58Q2M2W7 97 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 OR4X2Q8NGF9 303 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 RPUSD4Q96CM3 377 aaKnown RBP8.26□□□□□ -1.09
SMG6-213ENST00000573166 EAF1Q96JC9 268 aaPredicted RBP8.26□□□□□ -1.09
SMG6-213ENST00000573166 VPS25Q9BRG1 176 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 RABAC1Q9UI14 185 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 FBXL7Q9UJT9 491 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 WDFY4Q6ZS81 3184 aa8.26□□□□□ -1.09
SMG6-213ENST00000573166 C10orf113Q5VZT2 155 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 ZNF705AQ6ZN79 300 aaPredicted RBP8.25□□□□□ -1.09
SMG6-213ENST00000573166 OR4P4Q8NGL7 312 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 NDFIP1Q9BT67 221 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 TOLLIPQ9H0E2 274 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 MOB4Q9Y3A3 225 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 DYSFO75923 2080 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 HYPMO75409 117 aa8.25□□□□□ -1.09
SMG6-213ENST00000573166 HKR1P10072 659 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms