RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 ATG12O94817 140 aa6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 SFT2D2O95562 160 aa6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 IGHV3-23P01764 117 aa6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 HOXD3P31249 432 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 IFITM3Q01628 133 aa6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 EGFEM1PQ0D2K5 195 aa6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 PPP1R1AQ13522 171 aa6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 EXOSC2Q13868 293 aaKnown RBP6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 NMSQ5H8A3 153 aa6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 IL34Q6ZMJ4 242 aa6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 HSD17B13Q7Z5P4 300 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 FAM219AQ8IW50 185 aa6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 S100ZQ8WXG8 99 aa6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 IL22RA2Q969J5 263 aa6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 RRNAD1Q96FB5 475 aaKnown RBP6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 CCDC140Q96MF4 163 aa6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 C7orf50Q9BRJ6 194 aaKnown RBP6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 MCRIP2Q9BUT9 160 aaKnown RBP6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 CCDC32Q9BV29 185 aa6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 F11RQ9Y624 299 aaKnown RBP6.66□□□□□ -1.34
TRAPPC1-203ENST00000571739 IGHV3-21A0A0B4J1V1 117 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 A0A0B4J2A0 478 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 CENPXA8MT69 81 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 SEC14L6B5MCN3 397 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 PPP5D1E7EU14 171 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 INS-IGF2F8WCM5 200 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 K7EIM0 57 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 BMPR1BO00238 502 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 LYRM1O43325 122 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 WIPF1O43516 503 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 OR2C1O95371 312 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 DHFRP00374 187 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 IFNA17P01571 189 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 HLA-AP01891 365 aaKnown RBP6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 CLEC3BP05452 202 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 HIST1H1BP16401 226 aaKnown RBP6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 PDLIM3Q53GG5 364 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 PVRIGQ6DKI7 326 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 ACSM6Q6P461 480 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 CLEC19AQ6UXS0 136 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 LGI3Q8N145 548 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 CENPSQ8N2Z9 138 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 LRTM2Q8N967 370 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 OR52E5Q8NH55 327 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 CACNG5Q9UF02 275 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 SHPKQ9UHJ6 478 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 TBC1D24Q9ULP9 559 aa6.65□□□□□ -1.34
TRAPPC1-203ENST00000571739 PKD1L1Q8TDX9 2849 aa6.65□□□□□ -1.35
TRAPPC1-203ENST00000571739 C9orf170A2RU37 121 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 F8W735 103 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 I3L2K1 104 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 PITX3O75364 302 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 TCRBP04435 133 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 OR4E1P0C645 316 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 ANXA3P12429 323 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 ANXA7P20073 488 aaKnown RBP6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 ZP3P21754 424 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 VAMP1P23763 118 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 MECP2P51608 486 aaKnown RBP6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 SYNJ2BPP57105 145 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 SPCS3P61009 180 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 ERHP84090 104 aaKnown RBP6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 ZNF846Q147U1 533 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 MLANAQ16655 118 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 C9orf66Q5T8R8 295 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 C11orf87Q6NUJ2 197 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 ZNF114Q8NC26 417 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 OR1P1Q8NH06 330 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 ZNF502Q8TBZ5 544 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 VN1R17PQ8TDU5 208 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 SCARB1Q8WTV0 552 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 EEF1AKMT3Q96AZ1 226 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 ZNF414Q96IQ9 312 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 AURKAIP1Q9NWT8 199 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 THYN1Q9P016 225 aa6.64□□□□□ -1.35
TRAPPC1-203ENST00000571739 TRBV7-1A0A0A6YYK4 115 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 WI2-2373I1.2A0A1W2PRP0 233 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 UPK1BO75841 260 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 NXPH3O95157 252 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 CSN3P07498 182 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 RNASE2P10153 161 aaKnown RBP6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 EDN2P20800 178 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 UBE2MP61081 183 aaKnown RBP6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 RPEL1Q2QD12 228 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 BSXQ3C1V8 233 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 ADAMTSL5Q6ZMM2 481 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 GPHB5Q86YW7 130 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 OR9G4Q8NGQ1 327 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 OR1L6Q8NGR2 347 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 RNASE11Q8TAA1 199 aaKnown RBP6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 TMEM170AQ8WVE7 144 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 CXorf58Q96LI9 332 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 WDR12Q9GZL7 423 aaKnown RBP6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 PLEKHA3Q9HB20 300 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 ZC4H2Q9NQZ6 224 aa6.63□□□□□ -1.35
TRAPPC1-203ENST00000571739 FBN3Q75N90 2809 aa6.62□□□□□ -1.35
TRAPPC1-203ENST00000571739 TRAV6A0A075B6T7 132 aa6.62□□□□□ -1.35
TRAPPC1-203ENST00000571739 A0A1B0GU03 582 aa6.62□□□□□ -1.35
TRAPPC1-203ENST00000571739 DUXBA0A1W2PPF3 345 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms