RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 RNF126Q9BV68 326 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 SLC35D1Q9NTN3 355 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 TAS2R4Q9NYW5 299 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 UBQLN2Q9UHD9 624 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 ZNF221Q9UK13 617 aa4.3□□□□□ -1.72
UBFD1-209ENST00000569919 RPL36Q9Y3U8 105 aaKnown RBP4.3□□□□□ -1.72
UBFD1-209ENST00000569919 TMEM213A2RRL7 107 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 SNTNA6NMZ2 147 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 C16orf90A8MZG2 172 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 J3QRE1 110 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 PRH1P02810 166 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 GSTT2P0CG29 244 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 GSTT2BP0CG30 244 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 APELAP0DMC3 54 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 RRASP10301 218 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 ZBTB25P24278 435 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 CEACAM6P40199 344 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 GBX2P52951 348 aaPredicted RBP4.29□□□□□ -1.72
UBFD1-209ENST00000569919 SNRPGP62308 76 aaKnown RBP4.29□□□□□ -1.72
UBFD1-209ENST00000569919 MED21Q13503 144 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 TNXAQ16473 311 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 LHFPL3Q86UP9 236 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 OR4D10Q8NGI6 311 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 GPR148Q8TDV2 347 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 PTX4Q96A99 478 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 ZNF184Q99676 751 aaPredicted RBP4.29□□□□□ -1.72
UBFD1-209ENST00000569919 SPIN2AQ99865 258 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 SPIN2BQ9BPZ2 258 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 SELENOIQ9C0D9 397 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 SCRT2Q9NQ03 307 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 EXOGQ9Y2C4 368 aaKnown RBP4.29□□□□□ -1.72
UBFD1-209ENST00000569919 UFC1Q9Y3C8 167 aa4.29□□□□□ -1.72
UBFD1-209ENST00000569919 TRBV7-1A0A0A6YYK4 115 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 OR4C46A6NHA9 309 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 G3V2T6 193 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 PDCD6O75340 191 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 FKBP6O75344 327 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 OR2J3O76001 311 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 IFNA21P01568 189 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 IFNA17P01571 189 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 MGMTP16455 207 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 PSMB6P28072 239 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 TPBGQ13641 420 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 TMEM187Q14656 261 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 PRSS8Q16651 343 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 VMA21Q3ZAQ7 101 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 C1orf134Q5TEV5 83 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 MEDAGQ5VYS4 303 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 KDM4DQ6B0I6 523 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 GLIPR1L1Q6UWM5 242 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 CLEC19AQ6UXS0 136 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 Q6ZRP5 223 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 CDH26Q8IXH8 852 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.28□□□□□ -1.72
UBFD1-209ENST00000569919 OR5B3Q8NH48 314 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 CD300LFQ8TDQ1 290 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 SRSF12Q8WXF0 261 aaKnown RBP4.28□□□□□ -1.72
UBFD1-209ENST00000569919 SPXQ9BT56 116 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 BANF2Q9H503 90 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 ISG20L2Q9H9L3 353 aaKnown RBP4.28□□□□□ -1.72
UBFD1-209ENST00000569919 CACNG5Q9UF02 275 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 PSORS1C1Q9UIG5 152 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 MGAT4AQ9UM21 535 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 ZNF257Q9Y2Q1 563 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 ETV7Q9Y603 341 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 DNAH10Q8IVF4 4471 aa4.28□□□□□ -1.72
UBFD1-209ENST00000569919 SRRM4A7MD48 611 aaKnown RBP4.27□□□□□ -1.73
UBFD1-209ENST00000569919 M0R1X1 148 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 DYNC1I1O14576 645 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 DEFB4AO15263 64 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 CREBL2O60519 120 aaPredicted RBP4.27□□□□□ -1.73
UBFD1-209ENST00000569919 MRPS14O60783 128 aaKnown RBP4.27□□□□□ -1.73
UBFD1-209ENST00000569919 CRTAPO75718 401 aaPredicted RBP4.27□□□□□ -1.73
UBFD1-209ENST00000569919 DHFRP00374 187 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 IFNA10P01566 189 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 HIST1H1BP16401 226 aaKnown RBP4.27□□□□□ -1.73
UBFD1-209ENST00000569919 IGFBP3P17936 291 aaPredicted RBP4.27□□□□□ -1.73
UBFD1-209ENST00000569919 HLA-DMBP28068 263 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 UBE2KP61086 200 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 RTL8BQ17RB0 113 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 MRGPRG-AS1Q2M3A8 158 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 ZFP69Q49AA0 526 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 CCDC58Q4VC31 144 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 ZNF880Q6PDB4 577 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 Q6ZR54 194 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 SPATA24Q86W54 205 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 ACOT12Q8WYK0 555 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 EEF1AKMT3Q96AZ1 226 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 FAAP24Q9BTP7 215 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 NDUFAF3Q9BU61 184 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 KRTAP1-5Q9BYS1 174 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 IMPAD1Q9NX62 359 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 RABL2AQ9UBK7 228 aaPredicted RBP4.27□□□□□ -1.73
UBFD1-209ENST00000569919 CKLFQ9UBR5 152 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 GHRLQ9UBU3 117 aa4.27□□□□□ -1.73
UBFD1-209ENST00000569919 DCTN3O75935 186 aa4.26□□□□□ -1.73
UBFD1-209ENST00000569919 NAPSAO96009 420 aa4.26□□□□□ -1.73
UBFD1-209ENST00000569919 IGHV3-23P01764 117 aa4.26□□□□□ -1.73
UBFD1-209ENST00000569919 MIFP14174 115 aa4.26□□□□□ -1.73
UBFD1-209ENST00000569919 NPY1RP25929 384 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms