RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 TMEM65Q6PI78 240 aa18.38■□□□□ 0.53
RAB40C-212ENST00000569575 OR5AU1Q8NGC0 362 aa18.38■□□□□ 0.53
RAB40C-212ENST00000569575 OR10W1Q8NGF6 305 aa18.38■□□□□ 0.53
RAB40C-212ENST00000569575 OR1P1Q8NH06 330 aa18.38■□□□□ 0.53
RAB40C-212ENST00000569575 DTD1Q8TEA8 209 aa18.38■□□□□ 0.53
RAB40C-212ENST00000569575 CORTO00230 105 aa18.37■□□□□ 0.53
RAB40C-212ENST00000569575 DEFA4P12838 97 aa18.37■□□□□ 0.53
RAB40C-212ENST00000569575 PSMB8P28062 276 aa18.37■□□□□ 0.53
RAB40C-212ENST00000569575 C2orf68Q2NKX9 166 aa18.37■□□□□ 0.53
RAB40C-212ENST00000569575 FAM209BQ5JX69 171 aa18.37■□□□□ 0.53
RAB40C-212ENST00000569575 RBKSQ9H477 322 aa18.37■□□□□ 0.53
RAB40C-212ENST00000569575 F11RQ9Y624 299 aaKnown RBP18.37■□□□□ 0.53
RAB40C-212ENST00000569575 PET100P0DJ07 73 aa18.36■□□□□ 0.53
RAB40C-212ENST00000569575 AREGP15514 252 aa18.36■□□□□ 0.53
RAB40C-212ENST00000569575 PVALBP20472 110 aaPredicted RBP18.36■□□□□ 0.53
RAB40C-212ENST00000569575 H2BFSP57053 126 aa18.36■□□□□ 0.53
RAB40C-212ENST00000569575 BSXQ3C1V8 233 aa18.36■□□□□ 0.53
RAB40C-212ENST00000569575 OR5T1Q8NG75 326 aa18.36■□□□□ 0.53
RAB40C-212ENST00000569575 USMG5Q96IX5 58 aa18.36■□□□□ 0.53
RAB40C-212ENST00000569575 LINC00527Q9UJ94 153 aa18.36■□□□□ 0.53
RAB40C-212ENST00000569575 A0A0G2JLM5 398 aa18.35■□□□□ 0.53
RAB40C-212ENST00000569575 FAM223BA6NKX1 122 aa18.35■□□□□ 0.53
RAB40C-212ENST00000569575 SCAF4O95104 1147 aaKnown RBP18.35■□□□□ 0.53
RAB40C-212ENST00000569575 RLN2P04090 185 aa18.35■□□□□ 0.53
RAB40C-212ENST00000569575 FCN2Q15485 313 aa18.35■□□□□ 0.53
RAB40C-212ENST00000569575 FAM223AQ8IWN6 122 aa18.35■□□□□ 0.53
RAB40C-212ENST00000569575 SMIM8Q96KF7 97 aa18.35■□□□□ 0.53
RAB40C-212ENST00000569575 CUBNO60494 3623 aa18.34■□□□□ 0.53
RAB40C-212ENST00000569575 TRBV9A0A0B4J1U6 114 aa18.34■□□□□ 0.53
RAB40C-212ENST00000569575 MBPP02686 304 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-212ENST00000569575 GIPP09681 153 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-212ENST00000569575 RAB9AP51151 201 aa18.34■□□□□ 0.53
RAB40C-212ENST00000569575 C2orf83Q53S99 150 aa18.34■□□□□ 0.53
RAB40C-212ENST00000569575 PVRIGQ6DKI7 326 aa18.34■□□□□ 0.53
RAB40C-212ENST00000569575 NECAP1Q8NC96 275 aa18.34■□□□□ 0.53
RAB40C-212ENST00000569575 ZNF436Q9C0F3 470 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-212ENST00000569575 HAX1O00165 279 aa18.33■□□□□ 0.52
RAB40C-212ENST00000569575 SOX15O60248 233 aa18.33■□□□□ 0.52
RAB40C-212ENST00000569575 RAP2BP61225 183 aa18.33■□□□□ 0.52
RAB40C-212ENST00000569575 FGL1Q08830 312 aa18.33■□□□□ 0.52
RAB40C-212ENST00000569575 ZNF329Q86UD4 541 aa18.33■□□□□ 0.52
RAB40C-212ENST00000569575 SLC24A4Q8NFF2 622 aa18.33■□□□□ 0.52
RAB40C-212ENST00000569575 OR11H7Q8NGC8 314 aa18.33■□□□□ 0.52
RAB40C-212ENST00000569575 TAF15Q92804 592 aaKnown RBP eCLIP18.33■□□□□ 0.52
RAB40C-212ENST00000569575 ZNF355PQ9NSJ1 428 aa18.33■□□□□ 0.52
RAB40C-212ENST00000569575 IGLV11-55A0A075B6I3 123 aa18.32■□□□□ 0.52
RAB40C-212ENST00000569575 TSC22D2O75157 780 aa18.32■□□□□ 0.52
RAB40C-212ENST00000569575 SIX6O95475 246 aa18.32■□□□□ 0.52
RAB40C-212ENST00000569575 SCGB1D2O95969 90 aa18.32■□□□□ 0.52
RAB40C-212ENST00000569575 PF4V1P10720 104 aa18.32■□□□□ 0.52
RAB40C-212ENST00000569575 CXCL3P19876 107 aa18.32■□□□□ 0.52
RAB40C-212ENST00000569575 POLR2GP62487 172 aaKnown RBP eCLIP18.32■□□□□ 0.52
RAB40C-212ENST00000569575 RPL23AP62750 156 aaKnown RBP18.32■□□□□ 0.52
RAB40C-212ENST00000569575 CD83Q01151 205 aa18.32■□□□□ 0.52
RAB40C-212ENST00000569575 MYOZ3Q8TDC0 251 aa18.32■□□□□ 0.52
RAB40C-212ENST00000569575 RNASEH2CQ8TDP1 164 aaKnown RBP18.32■□□□□ 0.52
RAB40C-212ENST00000569575 CHAC2Q8WUX2 184 aa18.32■□□□□ 0.52
RAB40C-212ENST00000569575 UBE2E2Q96LR5 201 aa18.32■□□□□ 0.52
RAB40C-212ENST00000569575 ATP6V0BQ99437 205 aa18.32■□□□□ 0.52
RAB40C-212ENST00000569575 P2RX4Q99571 388 aa18.32■□□□□ 0.52
RAB40C-212ENST00000569575 K7EPK0 472 aa18.31■□□□□ 0.52
RAB40C-212ENST00000569575 APELAP0DMC3 54 aa18.31■□□□□ 0.52
RAB40C-212ENST00000569575 RNASE2P10153 161 aaKnown RBP18.31■□□□□ 0.52
RAB40C-212ENST00000569575 RAB11AP62491 216 aa18.31■□□□□ 0.52
RAB40C-212ENST00000569575 EXOSC2Q13868 293 aaKnown RBP18.31■□□□□ 0.52
RAB40C-212ENST00000569575 CXorf58Q96LI9 332 aa18.31■□□□□ 0.52
RAB40C-212ENST00000569575 ZNF747Q9BV97 191 aa18.31■□□□□ 0.52
RAB40C-212ENST00000569575 L7N2F9 121 aa18.3■□□□□ 0.52
RAB40C-212ENST00000569575 NXPH3O95157 252 aa18.3■□□□□ 0.52
RAB40C-212ENST00000569575 IFNA10P01566 189 aa18.3■□□□□ 0.52
RAB40C-212ENST00000569575 TRGV3P03979 118 aa18.3■□□□□ 0.52
RAB40C-212ENST00000569575 NPY1RP25929 384 aa18.3■□□□□ 0.52
RAB40C-212ENST00000569575 CDX1P47902 265 aaPredicted RBP18.3■□□□□ 0.52
RAB40C-212ENST00000569575 VAMP2P63027 116 aa18.3■□□□□ 0.52
RAB40C-212ENST00000569575 RAB32Q13637 225 aa18.3■□□□□ 0.52
RAB40C-212ENST00000569575 SPINK9Q5DT21 86 aa18.3■□□□□ 0.52
RAB40C-212ENST00000569575 C12orf54Q6X4T0 127 aa18.3■□□□□ 0.52
RAB40C-212ENST00000569575 PPP1R1CQ8WVI7 109 aa18.3■□□□□ 0.52
RAB40C-212ENST00000569575 FANCD2OSQ96PS1 177 aa18.3■□□□□ 0.52
RAB40C-212ENST00000569575 MAGT1Q9H0U3 335 aa18.3■□□□□ 0.52
RAB40C-212ENST00000569575 DEDDO75618 318 aa18.29■□□□□ 0.52
RAB40C-212ENST00000569575 REG1AP05451 166 aa18.29■□□□□ 0.52
RAB40C-212ENST00000569575 ETFRF1Q6IPR1 90 aa18.29■□□□□ 0.52
RAB40C-212ENST00000569575 SLC25A24Q6NUK1 477 aa18.29■□□□□ 0.52
RAB40C-212ENST00000569575 VN1R17PQ8TDU5 208 aa18.29■□□□□ 0.52
RAB40C-212ENST00000569575 PSENENQ9NZ42 101 aa18.29■□□□□ 0.52
RAB40C-212ENST00000569575 RCL1Q9Y2P8 373 aaKnown RBP18.29■□□□□ 0.52
RAB40C-212ENST00000569575 STRAPQ9Y3F4 350 aaKnown RBP18.29■□□□□ 0.52
RAB40C-212ENST00000569575 TSSC4Q9Y5U2 329 aaPredicted RBP18.29■□□□□ 0.52
RAB40C-212ENST00000569575 E5RGE8 158 aa18.28■□□□□ 0.52
RAB40C-212ENST00000569575 SSSCA1O60232 199 aa18.28■□□□□ 0.52
RAB40C-212ENST00000569575 TPPP2P59282 170 aa18.28■□□□□ 0.52
RAB40C-212ENST00000569575 RHOGP84095 191 aa18.28■□□□□ 0.52
RAB40C-212ENST00000569575 GAR1Q9NY12 217 aaKnown RBP18.28■□□□□ 0.52
RAB40C-212ENST00000569575 LSM5Q9Y4Y9 91 aaKnown RBP18.28■□□□□ 0.52
RAB40C-212ENST00000569575 RPS10-NUDT3A0A1W2PQS6 291 aa18.27■□□□□ 0.52
RAB40C-212ENST00000569575 TCRBV4S1A1TA0A5B7 111 aa18.27■□□□□ 0.52
RAB40C-212ENST00000569575 MPC2O95563 127 aa18.27■□□□□ 0.52
RAB40C-212ENST00000569575 S100A10P60903 97 aa18.27■□□□□ 0.52
RAB40C-212ENST00000569575 ATP5G2Q06055 141 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms