RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 SLC35G3Q8N808 338 aa7.53□□□□□ -1.2
CLN6-209ENST00000569336 ZNF114Q8NC26 417 aa7.53□□□□□ -1.2
CLN6-209ENST00000569336 VN1R17PQ8TDU5 208 aa7.53□□□□□ -1.2
CLN6-209ENST00000569336 RTBDNQ9BSG5 229 aaPredicted RBP7.53□□□□□ -1.2
CLN6-209ENST00000569336 PLEKHA3Q9HB20 300 aa7.53□□□□□ -1.2
CLN6-209ENST00000569336 CACFD1Q9UGQ2 172 aa7.53□□□□□ -1.2
CLN6-209ENST00000569336 GPR132Q9UNW8 380 aa7.53□□□□□ -1.2
CLN6-209ENST00000569336 KCNIP3Q9Y2W7 256 aa7.53□□□□□ -1.2
CLN6-209ENST00000569336 STAB2Q8WWQ8 2551 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 K7EIL1 84 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 NDUFB8O95169 186 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 CDS2O95674 445 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 LY86O95711 162 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 IFNA17P01571 189 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 IGKV1-5P01602 117 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 TRBV12-3P01733 135 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 HSPE1P61604 102 aaKnown RBP7.52□□□□□ -1.21
CLN6-209ENST00000569336 ERHP84090 104 aaKnown RBP7.52□□□□□ -1.21
CLN6-209ENST00000569336 SP6Q3SY56 376 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 TMEM268Q5VZI3 342 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 C19orf35Q6ZS72 473 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 OR1P1Q8NH06 330 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 IL22RA2Q969J5 263 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 GALNT14Q96FL9 552 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 CCDC140Q96MF4 163 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 ATP6V0BQ99437 205 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 SLC25A21Q9BQT8 299 aaPredicted RBP7.52□□□□□ -1.21
CLN6-209ENST00000569336 SRRQ9GZT4 340 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 ENY2Q9NPA8 101 aa7.52□□□□□ -1.21
CLN6-209ENST00000569336 GAR1Q9NY12 217 aaKnown RBP7.52□□□□□ -1.21
CLN6-209ENST00000569336 WI2-2373I1.2A0A1W2PRP0 233 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 NAP1L6A6NFF2 107 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 MFSD2BA6NFX1 497 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 DBX1A6NMT0 343 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 CENPXA8MT69 81 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 PPP5D1E7EU14 171 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 CORTO00230 105 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 IGLV1-51P01701 117 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 P0C879 139 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 AKR1C4P17516 323 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 SNCAP37840 140 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 HOXA1P49639 335 aaPredicted RBP7.51□□□□□ -1.21
CLN6-209ENST00000569336 RBMS2Q15434 407 aaKnown RBP7.51□□□□□ -1.21
CLN6-209ENST00000569336 FAM106AQ4KMX7 169 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 SLC25A24Q6NUK1 477 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 SPSB3Q6PJ21 355 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 CLEC19AQ6UXS0 136 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 ZNF502Q8TBZ5 544 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 GLYATL2Q8WU03 294 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 BSCL2Q96G97 398 aaPredicted RBP7.51□□□□□ -1.21
CLN6-209ENST00000569336 SIGLEC8Q9NYZ4 499 aa7.51□□□□□ -1.21
CLN6-209ENST00000569336 DUXBA0A1W2PPF3 345 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 A8MWP6 167 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 INS-IGF2F8WCM5 200 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 LGALS9O00182 355 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 ST8SIA3O43173 380 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 IGHV3-23P01764 117 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 GPR183P32249 361 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 SUB1P53999 127 aaKnown RBP eCLIP7.5□□□□□ -1.21
CLN6-209ENST00000569336 TMEM128Q5BJH2 165 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 DEFB121Q5J5C9 76 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 LCN12Q6JVE5 192 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 LINC00299Q6ZSB3 139 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 TMED4Q7Z7H5 227 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 GPHB5Q86YW7 130 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 OR2C3Q8N628 320 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 OR2K2Q8NGT1 345 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 PRR25Q96S07 402 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 C7orf50Q9BRJ6 194 aaKnown RBP7.5□□□□□ -1.21
CLN6-209ENST00000569336 PALMDQ9NP74 551 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.5□□□□□ -1.21
CLN6-209ENST00000569336 C21orf62Q9NYP8 219 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 DMRT1Q9Y5R6 373 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 S4R3C0 116 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 TMEM56-RWDD3S4R434 201 aa7.5□□□□□ -1.21
CLN6-209ENST00000569336 RYR3Q15413 4870 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 A0A0B4J293 547 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 A0A0B4J2A0 478 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 TGOLN2O43493 480 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 SCGB2A1O75556 95 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 CLEC3BP05452 202 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 SULT1A3P0DMM9 295 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 SULT1A4P0DMN0 295 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 GP9P14770 177 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 SPNP16150 400 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 SPCS3P61009 180 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 UBE2MP61081 183 aaKnown RBP7.49□□□□□ -1.21
CLN6-209ENST00000569336 TMEM187Q14656 261 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 IZUMO4Q1ZYL8 232 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 AARDQ4LEZ3 155 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 PLET1Q6UQ28 207 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 SELENOHQ8IZQ5 122 aaKnown RBP7.49□□□□□ -1.21
CLN6-209ENST00000569336 LGI3Q8N145 548 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 CENPSQ8N2Z9 138 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 OR52E5Q8NH55 327 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 LHFPL5Q8TAF8 219 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 DYNLRB2Q8TF09 96 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 TMEM230Q96A57 120 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 MISP3Q96FF7 219 aa7.49□□□□□ -1.21
CLN6-209ENST00000569336 CACNG5Q9UF02 275 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms